Contig 000463:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014P10Sequence433000463 (9)ref|XP_009629282.1|2e-27PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana tomentosiform765010543 (5)ref|XP_010325538.1|2e-13PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2 [Solanum lyco
JMFF034F16Sequence495000463 (9)ref|XP_009629282.1|3e-26PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana tomentosiform656010543 (5)
JMFS010E09Sequence580000463 (9)ref|XP_009781095.1|5e-50PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS041A04Sequence619000463 (9)ref|XP_009781095.1|7e-64PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS047F04Sequence618000463 (9)ref|XP_009781095.1|5e-70PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS063B03Sequence627000463 (9)ref|XP_009781095.1|2e-66PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS094F04Sequence626000463 (9)ref|XP_009781095.1|2e-43PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS100A02Sequence609000463 (9)ref|XP_009781095.1|2e-50PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r
JMFS125E06Sequence566000463 (9)ref|XP_009781095.1|2e-54PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana sylvestris] r

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS047F04+ TATGC
                      ____________________________________________________________
consensus TATGC
 
. : . : . : . : . : . :
JMFS047F04+ GAGCCTGAAGTATTCCCCCTAGAATTGCAGAACCACTTGCGACATGACGGCACATTGCAC
JMFS063B03+ ATTCCCCCTAGAATTGCAGAACCACTTGCGACATGACGGCACATTGCAC
JMFS125E06+ CATTGCAC
JMFS041A04+ TAGAATTGCAGAACCACTTGCGACATGACGGCACATTGCAC
                      ____________________________________________________________
consensus GAGCCTGAAGTATTCCCCCTAGAATTGCAGAACCACTTGCGACATGACGGCACATTGCAC
 
. : . : . : . : . : . :
JMFS047F04+ CTGACAACACAGGCGGGGTTTGTTATACCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS063B03+ CTGACAACACAGGCGGGGTTTGTTATGCCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS125E06+ CTGACAACACAGGCGGGGTTTGTTATGCCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS041A04+ CTGACAACACAGGCGGGGTTTGTTATGCCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS010E09+ CAGGCGGGGTTTGTTATACCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS100A02+ CACAGGCGGGGTTTGTTATACCACAGTACCGACAAGCATGCTCCACGGCAAAA
JMFS094F04+ TACCGACAAGCATGCTCCACGGCAAAA
                      ____________________________________________________________
consensus CTGACAACACAGGCGGGGTTTGTTATGCCACAGTACCGACAAGCATGCTCCACGGCAAAA
 
. : . : . : . : . : . :
JMFS047F04+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS063B03+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS125E06+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS041A04+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS010E09+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS100A02+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
JMFS094F04+ TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
                      ____________________________________________________________
consensus TCCCCTTTCCCGTACTCAAACCCCTCATCATCCCCAGTCTCCTCAAAATTCAACCCGCTC
 
. : . : . : . : . : . :
JMFS047F04+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS063B03+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS125E06+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS041A04+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS010E09+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS100A02+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFF034F16+ GCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
JMFS094F04+ ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
                      ____________________________________________________________
consensus ATCCCAGCGGCTAAGGCATCGAAAGCTGCAGACTGATTACTATTAGCGCCACTATTACTG
 
. : . : . : . : . : . :
JMFS047F04+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS063B03+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS125E06+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS041A04+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS010E09+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS100A02+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFF034F16+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFF014P10+ TCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
JMFS094F04+ CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
                      ____________________________________________________________
consensus CTACCTTTTCCGCCGGGTCCATTTCCACCGTACCGGGATTTGGTGGAGGGCGAGGTGTCG
 
. : . : . : . : . : . :
JMFS047F04+ GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS063B03+ GATGAGGGGGGCCTATCAGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS125E06+ GATGAGGGGGGCCTATCAGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS041A04+ GATGAGGGGGGCCTATCAGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS010E09+ GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS100A02+ GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFF034F16+ GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFF014P10+ GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
JMFS094F04+ GATGAGGGGGGCCTATCAGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
                      ____________________________________________________________
consensus GATGAGGGGGGCCTATCTGGTGTTTCGGAGACCAAGGAATCTGAGGGCGTGGGCCACGCC
 
. : . : . : . : . : . :
JMFS047F04+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS063B03+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS125E06+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS041A04+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS010E09+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS100A02+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFF034F16+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFF014P10+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
JMFS094F04+ GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
                      ____________________________________________________________
consensus GAAGGTCGAATGGGCTGAGAAAGTTCTTGAAAATCCGGGTAATCGAATTCCTCGCCCGGC
 
. : . : . : . : . : . :
JMFS047F04+ GTGTTGAACTCGACGAACGTGTAGGCGTTGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
JMFS063B03+ GTGTTGAACTCCACGAACGTGTAGGCGTCGTTGCCCGTGTCTGGCTGGGACGCAGTCTCG
JMFS125E06+ GTGTTGAACTCCACGAACGTGTAGGCGTCGTTGCCCGTGTCTGGCTGGGACGCAGTCTCG
JMFS041A04+ GTGTTGAACTCCACGAACGTGTAGGCGTCGTTGCCCGTGTCTGGCTGGGACGCAGTCTCG
JMFS010E09+ GTGTTGAACTCGACGAACGTGTAGGCGTCGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
JMFS100A02+ GTGTTGAACTCGACGAACGTGTAGGCGTCGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
JMFF034F16+ GTGTTGAACTCGACGAACGTGTAGGCGTCGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
JMFF014P10+ GTGTTGAACTCGACGAACGTGTAGGCGTCGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
JMFS094F04+ GTGTTGAACTCCACGAACGTGTAGGCGTCGTTGCCCGTGTCTGGCTGGGACGCAGTCTCG
                      ____________________________________________________________
consensus GTGTTGAACTCGACGAACGTGTAGGCGTCGTTGCCTGTGTCTGGCTGGGACGCAGTCTCG
 
. : . : . : . : . : . :
JMFS047F04+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
JMFS063B03+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTT-G
JMFS125E06+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTT-G
JMFS041A04+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTT-G
JMFS010E09+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
JMFS100A02+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
JMFF034F16+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
JMFF014P10+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
JMFS094F04+ TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTT-G
                      ____________________________________________________________
consensus TACAGATCATTTGCCTGAGAGTCCATTAGAATACGAATAGCGCAAGGCTTAGGGTTTTGG
 
. : . : . : . : . : . :
JMFS047F04+ GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS063B03+ GATTGTAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS125E06+ GATTGTAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS041A04+ GATTGTAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS010E09+ GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS100A02+ GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFF034F16+ GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFF014P10+ GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
JMFS094F04+ GATTGTAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
                      ____________________________________________________________
consensus GATTGGAGCTTTCGAAAGTGGTGGTCTAGGATTAGGGTTGCAGGGGCGGAAAAGACTCGG
 
. : . : . : . : . : . :
JMFS047F04+ CGAGACGCCGACG
JMFS063B03+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTT
JMFS125E06+ CGAGACGCCGACGAAGAGA
JMFS041A04+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTT
JMFS010E09+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTCGTTGATTTGT
JMFS100A02+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTCGTTGATTTGTTTTAAGCGTTT
JMFF034F16+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTCGTTGATTTGTTTTAAGCGTTT
JMFF014P10+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTCGTTGATTTGTTTTAAGCGTTT
JMFS094F04+ CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTTGTTGATTTGTTTTAAGCGTTT
                      ____________________________________________________________
consensus CGAGACGCCGACGAAGAGATGGCGAGTTGGTAAGACTTCGTTGATTTGTTTTAAGCGTTT
 
. : . : . : . : . : . :
JMFS100A02+ TACGTGAAT
JMFF034F16+ TACGTGAAT
JMFF014P10+ TACGTGAAT
JMFS094F04+ TCCGTGAATGAAACATATGACAGTAATGGATTGAACGAGCGGATTCGCGAGTCACGACAA
                      ____________________________________________________________
consensus TACGTGAATGAAACATATGACAGTAATGGATTGAACGAGCGGATTCGCGAGTCACGACAA