Contig 000457:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS066D10Sequence611000457 (4)ref|XP_006360328.1|3e-84PREDICTED: probable pectate lyase 15-like [Solanum tuberosum]
JMFS081G12Sequence589000457 (4)ref|XP_006360328.1|2e-77PREDICTED: probable pectate lyase 15-like [Solanum tuberosum]
JMFS084C04Sequence608000457 (4)ref|XP_006360328.1|9e-82PREDICTED: probable pectate lyase 15-like [Solanum tuberosum]
JMFS142C08Sequence613000457 (4)ref|XP_006360328.1|1e-85PREDICTED: probable pectate lyase 15-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS142C08+                                               GTAATAACCATGTCGCGCTTGAAG
JMFS066D10+                                                     ACCATGTCGCGCTTGAAG
JMFS084C04+                                                               GCTTGAAG
                      ____________________________________________________________
consensus                                                 GTAATAACCATGTCGCGCTTGAAG
 
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JMFS142C08+           ATAATCCACAGAGGTTCATCCTGGATCACAGCATGGCGAAGAGTGCCAGGCTTAGGGTTC
JMFS066D10+           ATAATCCACAGAGGTTCATCCTGGATCACAGCATGGCGAAGAGTGCCAGGCTTAGGGTTC
JMFS084C04+           ATAATCCACAGAGGTTCATCCTGGATCACAGCATGGCGAAGAGTGCCAGGCTTAGGGTTC
JMFS081G12+                      AGGTTCATCCTGGATCACAGCATGGCGAAGAGTGCCAGGCTTAGGGTTC
                      ____________________________________________________________
consensus             ATAATCCACAGAGGTTCATCCTGGATCACAGCATGGCGAAGAGTGCCAGGCTTAGGGTTC
 
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JMFS142C08+           ACAGGGTCATCATCAGCATGATCAGTAACAACGTAGAGCTGACCATCACGCCCACCAATG
JMFS066D10+           ACAGGGTCATCATCAGCATGATCAGTAACAACGTAGAGCTGACCATCACGCCCACCAATG
JMFS084C04+           ACAGGGTCATCATCAGCATGATCAGTAACAACGTAGAGCTGACCATCACGCCCACCAATG
JMFS081G12+           ACAGGGTCATCATCAGCATGATCAGTAACAACGTAGAGCTGACCATCACGCCCACCAATG
                      ____________________________________________________________
consensus             ACAGGGTCATCATCAGCATGATCAGTAACAACGTAGAGCTGACCATCACGCCCACCAATG
 
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JMFS142C08+           GCATTGCGCCCAAACCCAATTCCACAGTCCGCAAGACGCTGGCGATTATTGTGCCAATTT
JMFS066D10+           GCATTGCGCCCAAACCCAATTCCACAGTCCGCAAGACGCTGGCGATTATTGTGCCAATTT
JMFS084C04+           GCATTGCGCCCAAACCCAATTCCACAGTCCGCAAGACGCTGGCGATTATTGTGCCAATTT
JMFS081G12+           GCATTGCGCCCAAACCCAATTCCACAGTCCGCAAGACGCTGGCGATTATTGTGCCAATTT
                      ____________________________________________________________
consensus             GCATTGCGCCCAAACCCAATTCCACAGTCCGCAAGACGCTGGCGATTATTGTGCCAATTT
 
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JMFS142C08+           GGGTCACAACGCCAGCAGTCATCAATCGGATTACCAGTCCCACATGAGAAATATCCAAGT
JMFS066D10+           GGGTCACAACGCCAGCAGTCATCAATCGGATTACCAGTCCCACATGAGAAATATCCAAGT
JMFS084C04+           GGGTCACAACGCCAGCAGTCATCAATCGGATTACCAGTCCCACATGAGAAATATCCAAGT
JMFS081G12+           GGGTCACAACGCCAGCAGTCATCAATCGGATTACCAGTCCCACATGAGAAATATCCAAGT
                      ____________________________________________________________
consensus             GGGTCACAACGCCAGCAGTCATCAATCGGATTACCAGTCCCACATGAGAAATATCCAAGT
 
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JMFS142C08+           TTTCGCCTCTCTGTGCTATTCCTGATGCTCTCTGCAACCATGGAGGCGACCTCTTCAGGA
JMFS066D10+           TTTCGCCTCTCTGTGCTATTCCTGATGCTCTCTGCAACCATGGAGGCGACCTCTTCAGGA
JMFS084C04+           TTTCGCCTCTCTGTGCTATTCCTGATGCTCTCTGCAACCATGGAGGCGACCTCTTCAGGA
JMFS081G12+           TTTCGCCTCTCTGTGCTATTCCTGATGCTCTCTGCAACCATGGAGGCGACCTCTTCAGGA
                      ____________________________________________________________
consensus             TTTCGCCTCTCTGTGCTATTCCTGATGCTCTCTGCAACCATGGAGGCGACCTCTTCAGGA
 
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JMFS142C08+           TCATCAACCGCCTGCTTGCTCAAAGCCTCTTCAACCTCCGCCAACCTTGCCGCCATTGTT
JMFS066D10+           TCATCAACCGCCTGCTTGCTCAAAGCCTCTTCAACCTCCGCCAACCTTGCCGCCATTGTT
JMFS084C04+           TCATCAACCGCCTGCTTGCTCAAAGCCTCTTCAACCTCCGCCAACCTTGCCGCCATTGTT
JMFS081G12+           TCATCAACCGCCTGCTTGCTCAAAGCCTCTTCAACCTCCGCCAACCTTGCCGCCATTGTT
                      ____________________________________________________________
consensus             TCATCAACCGCCTGCTTGCTCAAAGCCTCTTCAACCTCCGCCAACCTTGCCGCCATTGTT
 
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JMFS142C08+           GAGTTGTGCGAGCTCTGCAATTCCTCCTTCTCCGCAGTCCTCAAGTCGGAACCGCCATTA
JMFS066D10+           GAGTTGTGCGAGCTCTGCAATTCCTCCTTCTCCGCAGTCCTCAAGTCGGAACCGCCATTA
JMFS084C04+           GAGTTGTGCGAGCTCTGCAATTCCTCCTTCTCCGCAGTCCTCAAGTCGGAACCGCCATTA
JMFS081G12+           GAGTTGTGCGAGCTCTGCAATTCCTCCTTCTCCGCAGTCCTCAAGTCGGAACCGCCATTA
                      ____________________________________________________________
consensus             GAGTTGTGCGAGCTCTGCAATTCCTCCTTCTCCGCAGTCCTCAAGTCGGAACCGCCATTA
 
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JMFS142C08+           CTGTGTACTCTAGCAAAAACTCCGGCGACGAACAAGAGAAGCAGCAGAGAGCTCAGACAA
JMFS066D10+           CTGTGTACTCTAGCAAAAACTCCGGCGACGAACAAGAGAAGCAGCAGAGAGCTCAGACAA
JMFS084C04+           CTGTGTACTCTAGCAAAAACTCCGGCGACGAACAAGAGAAGCAGCAGAGAGCTCAGACAA
JMFS081G12+           CTGTGTACTCTAGCAAAAACTCCGGCGACGAACAAGAGAAGCAGCAGAGAGCTCAGACAA
                      ____________________________________________________________
consensus             CTGTGTACTCTAGCAAAAACTCCGGCGACGAACAAGAGAAGCAGCAGAGAGCTCAGACAA
 
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JMFS142C08+           AACGAAGCACGTTTCTTCCACCCCGCCATTGCCGCTAACGATGATAACTCGCTTCCCGTT
JMFS066D10+           AACGAAGCACGTTTCTTCCACCCCGCCATTGCCGCTAACGATGATAACTCGCTTCCCGTT
JMFS084C04+           AACGAAGCACGTTTCTTCCACCCCGCCATTGCCGCTAACGATGATAACTCGCTTCCCGTT
JMFS081G12+           AACGAAGCACGTTTCTTCCACCCCGCCATTGCCGCTAACGATGATAACTCGCTTCCCGTT
                      ____________________________________________________________
consensus             AACGAAGCACGTTTCTTCCACCCCGCCATTGCCGCTAACGATGATAACTCGCTTCCCGTT
 
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JMFS142C08+           CCCCCCTCTCTCTCTAGAACTTTTGGGGAAGGAAAGAATGATATTTGGA           
JMFS066D10+           CCCCCCTCTCTCTCTAGAACTTTTGGGGAAGGAAAGAATGATATTTGGA           
JMFS084C04+           CCCCCCTCTCTCTCTAGAACTTTTGGGGAAGGAAAGAATGATATTTGGAGAGA       
JMFS081G12+           CCCCCCTCTCTCTCTAGAACTTTTGGGGAAGGAAAGAATGATATTTGGAGAGAGAATTAA
                      ____________________________________________________________
consensus             CCCCCCTCTCTCTCTAGAACTTTTGGGGAAGGAAAGAATGATATTTGGAGAGAGAATTAA