Contig 000456:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS081D10Sequence603000456 (2)gb|EYU21278.1|7e-11hypothetical protein MIMGU_mgv1a001736mg [Erythranthe guttata]
JMSF043D05Sequence721000456 (2)ref|XP_009759587.1|1e-39PREDICTED: AT-rich interactive domain-containing protein 4-like [Nicotiana sylv241007210 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043D05+ CTGGGATCTCCAAGTAAACT
                      ____________________________________________________________
consensus CTGGGATCTCCAAGTAAACT
 
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JMSF043D05+ GTGGTTAGTGATCTGGCACTTGAAAGCCCAGAAATGGCTTCTTCAGAAGACAAGTTAAAA
                      ____________________________________________________________
consensus GTGGTTAGTGATCTGGCACTTGAAAGCCCAGAAATGGCTTCTTCAGAAGACAAGTTAAAA
 
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JMSF043D05+ CCTTCCCATACTAGTGAACTAAATTCATCGTTTGGAAGCTGATCTCCTTGCAAAAAGACT
                      ____________________________________________________________
consensus CCTTCCCATACTAGTGAACTAAATTCATCGTTTGGAAGCTGATCTCCTTGCAAAAAGACT
 
. : . : . : . : . : . :
JMSF043D05+ ATGTTTGGCTTCACTGTATCCAGAGCCTTACGAAATTCATCTGTGCTTGGGTTTTTTAGA
JMFS081D10+ AGA
                      ____________________________________________________________
consensus ATGTTTGGCTTCACTGTATCCAGAGCCTTACGAAATTCATCTGTGCTTGGGTTTTTTAGA
 
. : . : . : . : . : . :
JMSF043D05+ AGTTGAACCTCCAAACGACCAGATGATGCTATCTCTGAAGTGGGATATCCTGGCCTCTCA
JMFS081D10+ AGTTGAACCTCCAAACGACCAGATGATGCTATCTCTGAAGTGGGATATCCTGGCCTCTCA
                      ____________________________________________________________
consensus AGTTGAACCTCCAAACGACCAGATGATGCTATCTCTGAAGTGGGATATCCTGGCCTCTCA
 
. : . : . : . : . : . :
JMSF043D05+ TCTGCAACATCTTGCTTGTATATATTTTCAGCAGCTCTACCACACACAACTGCAAGGAGA
JMFS081D10+ TCTGCAACATCTTGCTTGTATATATTTTCAGCAGCTCTACCACACACAACTGCAAGGAGA
                      ____________________________________________________________
consensus TCTGCAACATCTTGCTTGTATATATTTTCAGCAGCTCTACCACACACAACTGCAAGGAGA
 
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JMSF043D05+ CTGCAACTATGTTTGGAAGTCCCTTGAACAGAATACATCAGATGTTGTCTCCTGACTGCC
JMFS081D10+ CTGCAACTATGTTTGGAAGTCCCTTGAACAGAATACATCAGATGTTGTCTCCTGACTGCC
                      ____________________________________________________________
consensus CTGCAACTATGTTTGGAAGTCCCTTGAACAGAATACATCAGATGTTGTCTCCTGACTGCC
 
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JMSF043D05+ AACTTGTTTGAACTACAGAACCAATCAAGCTCCTCACTTTATGATGTGAGAGTATGGAAA
JMFS081D10+ AACTTGTTTGAACTACAGAACCAATCAAGCTCCTCACTTTATGATGTGAGAGTATGGAAA
                      ____________________________________________________________
consensus AACTTGTTTGAACTACAGAACCAATCAAGCTCCTCACTTTATGATGTGAGAGTATGGAAA
 
. : . : . : . : . : . :
JMSF043D05+ TCTGCAATTTCTGCTACATCAAACACTCCAAAGCTACTCAAACCCAATATAGAATCCTGG
JMFS081D10+ TCTGCAATTTCTGCTACATCAAACACTCCAAAGCTACTCAAACCCAATATAGAATCCTGG
                      ____________________________________________________________
consensus TCTGCAATTTCTGCTACATCAAACACTCCAAAGCTACTCAAACCCAATATAGAATCCTGG
 
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JMSF043D05+ ACTTGCATAACCAATCACCATGCCACCAAGACTCCCTTGAACTCCGACCCAGATGAGAAA
JMFS081D10+ ACTTGCATAACCAATCACCATGCCACCAAGACTCCCTTGAACTCCGACCCAGATGAGAAA
                      ____________________________________________________________
consensus ACTTGCATAACCAATCACCATGCCACCAAGACTCCCTTGAACTCCGACCCAGATGAGAAA
 
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JMSF043D05+ ACAGAGGAATCCGAAGAACCCAAAAGGAGAAATCAACAACGATCGAGGGTCCACGTCACT
JMFS081D10+ ACAGAGGAATCCGAAGAACCCAAAAGGAGAAATCAACAACGATCGAGGGTCCACGTCACT
                      ____________________________________________________________
consensus ACAGAGGAATCCGAAGAACCCAAAAGGAGAAATCAACAACGATCGAGGGTCCACGTCACT
 
. : . : . : . : . : . :
JMSF043D05+ TGGAAGCTCCAAATCCACAAAAAGAATGCGTACGAGTAAGGAATGAAAGAAACCCTAATA
JMFS081D10+ TGGAAGCTCCAAATCCACAAAAAGAATGCGTACGAGTAAGGAATGAAAGAAACCCTAATA
                      ____________________________________________________________
consensus TGGAAGCTCCAAATCCACAAAAAGAATGCGTACGAGTAAGGAATGAAAGAAACCCTAATA
 
. : . : . : . : . : . :
JMSF043D05+ CCCTATTCTTAAAAATCTAACCATCCATCCACCCACCCATC
JMFS081D10+ CCCTATTCTTAAAAATCTAACCATCCATCCACCCATCCATCCAATCAATGTGGAAAAAGG
                      ____________________________________________________________
consensus CCCTATTCTTAAAAATCTAACCATCCATCCACCCATCCATCCAATCAATGTGGAAAAAGG
 
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JMFS081D10+ AAAATAGAAAAGAAAAGAACAAAAAAACGGTGATTTAAGAATCTTTCTTTCACATATATC
                      ____________________________________________________________
consensus AAAATAGAAAAGAAAAGAACAAAAAAACGGTGATTTAAGAATCTTTCTTTCACATATATC