Contig 000452:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS140D12+                                               ACTCCATATACTGCGCGAGTAGCT
                      ____________________________________________________________
consensus                                                 ACTCCATATACTGCGCGAGTAGCT
 
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JMFS140D12+           GCATTAGCTGACTCACTCAGCCCAGTGCTACCCATCATCTCCTTTATAACAAGTCACAAA
JMFS131C12+                               CCCAGTGCTACCCATCATCTCCTTTATAACAAGTCACAAA
JMFS074G05+                                            ATCATCTCCTTTATAACAAGTCACAAA
                      ____________________________________________________________
consensus             GCATTAGCTGACTCACTCAGCCCAGTGCTACCCATCATCTCCTTTATAACAAGTCACAAA
 
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JMFS140D12+           TAATTGTTTTTATTTTTATTTTTTATTTTTTTCTCCAACTGCAAAACACAATATCTCACA
JMFS131C12+           TAATTGTTTTTATTTTTATTTTTTATTTTTTTCTCCAACTGCAAAACACAATATCTCACA
JMFS074G05+           TAATTGTTTTTATTTTTATTTTTTATTTTTTTCTCCAACTGCAAAACACAATATCTCACA
                      ____________________________________________________________
consensus             TAATTGTTTTTATTTTTATTTTTTATTTTTTTCTCCAACTGCAAAACACAATATCTCACA
 
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JMFS140D12+           AACGCACTCTTCTTTTATTGCCAATCAATAACAACAATCAACCTTCAATCAATAATCAAA
JMFS131C12+           AACGCACTCTTCTTTTATTGCCAATCAATAACAACAATCAACCTTCAATCAATAATCAAA
JMFS074G05+           AACGCACTCTTCTTTTATTGCCAATCAATAACAACAATCAACCTTCAATCAATAATCAAA
                      ____________________________________________________________
consensus             AACGCACTCTTCTTTTATTGCCAATCAATAACAACAATCAACCTTCAATCAATAATCAAA
 
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JMFS140D12+           TACACAA-TTTTTTTTTTGTGCAGCTCTACTTCAAGAATTCAACACAACTGACCAAAAAC
JMFS131C12+           TACACAA-TTTTTTTTTTGTGCAGCTCTACTTCAAGAATTCAACACAACTGACCAAAAAC
JMFS074G05+           TACACAATTTTTTTTTTTGTGCAGCTCTACTTCAAGAATTCAACACAACTGACCAAAAAC
                      ____________________________________________________________
consensus             TACACAA-TTTTTTTTTTGTGCAGCTCTACTTCAAGAATTCAACACAACTGACCAAAAAC
 
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JMFS140D12+           ACAAAAACAAAGATTCAGAAAAAGTAAAATTTAAGGGATTTCCTCAGAATCCGCCAGAAA
JMFS131C12+           ACAAAAACAAAGATTCAGAAAAAGTAAAATTTAAGGGATTTCCTCAGAATCCGCCAGAAA
JMFS074G05+           ACAAAAACAAAGATTCAGAAAAAGTAAAATTTAAGGGATTTCCTCAGAATCCGCCAGAAA
                      ____________________________________________________________
consensus             ACAAAAACAAAGATTCAGAAAAAGTAAAATTTAAGGGATTTCCTCAGAATCCGCCAGAAA
 
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JMFS140D12+           TTCTCATTAATACAGATGATACAATTAAACAAGAAAAACTACAAAAAAAGAATTGCCTCC
JMFS131C12+           TTCTCATTAATACAGATGATACAATTAAACAAGAAAAACTACAAAAAAAGAATTGCCTCC
JMFS074G05+           TTCTCATTAATACAGATGATACAATTAAACAAGAAAAACTACAAAAAAAGAATTGCCTCC
                      ____________________________________________________________
consensus             TTCTCATTAATACAGATGATACAATTAAACAAGAAAAACTACAAAAAAAGAATTGCCTCC
 
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JMFS140D12+           AAAAAGAAACCCTAAATTTCAGGCACTTCCTTCTTTTCTTTTCTTTTCTTTTCTAGATTT
JMFS131C12+           AAAAAGAAACCCTAAATTTCAGGCACTTCCTTCTTTTCTTTTCTTTTCTTTTCTAGATTT
JMFS074G05+           AAAAAGAAACCCTAAATTTCAGGCACTTCCTTCTTTTCTTTTCTTTTCTTTTCTAGATTT
                      ____________________________________________________________
consensus             AAAAAGAAACCCTAAATTTCAGGCACTTCCTTCTTTTCTTTTCTTTTCTTTTCTAGATTT
 
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JMFS140D12+           CTAAAACAACTCATCCAACTTTCTCTCCACTTCAGAAACCAAAACCGAAACCCGAAAGAG
JMFS131C12+           CTAAAACAACTCATCCAACTTTCTCTCCACTTCAGAAACCAAAACCGAAACCCGAAAGAG
JMFS074G05+           CTAAAACAACTCATCCAACTTTCTCTCCACTTCAGAAACCAAAACCGAAACCCGAAAGAG
                      ____________________________________________________________
consensus             CTAAAACAACTCATCCAACTTTCTCTCCACTTCAGAAACCAAAACCGAAACCCGAAAGAG
 
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JMFS140D12+           TAACTGTATATAGTGAAAGCTGCCGCTATCTCGATCGGCCAGTACGACGCCGTAATCTGG
JMFS131C12+           TAACTGTATATAGTGAAAGCTGCCGCTATCTCGATCGGCCAGTACGACGCCGTAATCTGG
JMFS074G05+           TAACTGTATATAGTGAAAGCTGCCGCTATCTCGATCGGCCAGTACGACGCCGTAATCTGG
                      ____________________________________________________________
consensus             TAACTGTATATAGTGAAAGCTGCCGCTATCTCGATCGGCCAGTACGACGCCGTAATCTGG
 
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JMFS140D12+           AGTGTGCGGCCTTCGATAACCTCTTGGATTGATCGATTACGCAATCAAAATCC       
JMFS131C12+           AGTGTGCGGCCTTCGATAACCTCTTGGATTGATCGATTACGCAATCAAAATCC       
JMFS074G05+           AGTGTGCGGCCTTCGATAACCTCTTGGATTGATCGATTACGCAATCAAAATCCCGGACAA
                      ____________________________________________________________
consensus             AGTGTGCGGCCTTCGATAACCTCTTGGATTGATCGATTACGCAATCAAAATCCCGGACAA
 
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JMFS074G05+           CGGAAGGAACCGTATAGTAAATATATATGCTTACGGAGGAGAAGATGGCAGTAACTAGGG
                      ____________________________________________________________
consensus             CGGAAGGAACCGTATAGTAAATATATATGCTTACGGAGGAGAAGATGGCAGTAACTAGGG