Contig 000450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N02Sequence595000450 (4)ref|XP_006350514.1|7e-18PREDICTED: WD repeat-containing protein YMR102C-like [Solanum tuberosum]716005354 (2)emb|CDP05030.1|3e-35unnamed protein product [Coffea canephora]
JMFF026K04Sequence475000450 (4)ref|XP_006350514.1|7e-12PREDICTED: WD repeat-containing protein YMR102C-like [Solanum tuberosum]586005354 (2)emb|CDP05030.1|2e-28unnamed protein product [Coffea canephora]
JMFS066F09Sequence631000450 (4)ref|XP_004234989.1|95.5PREDICTED: uncharacterized protein LOC101265109 [Solanum lycopersicum] ref|XP_01
JMFS073B05Sequence617000450 (4)ref|XP_004234989.1|95.5PREDICTED: uncharacterized protein LOC101265109 [Solanum lycopersicum] ref|XP_01

Alignment

This contig is upended


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JMFF009N02+                                                                  CTTCA
                      ____________________________________________________________
consensus                                                                    CTTCA
 
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JMFF009N02+           CTATTCATTAAGTCTNTAATCAAGCGCAATCTATTCAAGCAATGACTCTTCACTCTTTTC
                      ____________________________________________________________
consensus             CTATTCATTAAGTCTNTAATCAAGCGCAATCTATTCAAGCAATGACTCTTCACTCTTTTC
 
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JMFF026K04+                                                                  CCGAG
JMFF009N02+           AGTATCGTCTGAGCTTTCCCATTCACCGGACTTTCTCTTTGTCTGCGTTGCTGAGCCGAG
                      ____________________________________________________________
consensus             AGTATCGTCTGAGCTTTCCCATTCACCGGACTTTCTCTTTGTCTGCGTTGCTGAGCCGAG
 
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JMFF026K04+           GGGGATTCACACGAACGATCCTCAAAGTCTAACCCCACATTTGGGTGATTACTTGACATG
JMFF009N02+           GGGGATTCACACGAACGATCCTCAAAGTCTAACCCCACATTTGGGTGATTACTTGACATG
                      ____________________________________________________________
consensus             GGGGATTCACACGAACGATCCTCAAAGTCTAACCCCACATTTGGGTGATTACTTGACATG
 
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JMFF026K04+           AAATGCTCTGCCAAACTGCGTTCTTTGCAGTCCACTTCGCAATCTGTATTGCCACTTCCA
JMFF009N02+           AAATGCTCTGCCAAACTGCGTTCTTTGCAGTCCACTTCGCAATCTGTATTGCCACTTCCA
JMFS066F09+                                     GCAGTCCACTTCGCAATCTGTATTGCCACTTCCA
JMFS073B05+                                                      CTGTATTGCCACTTCCA
                      ____________________________________________________________
consensus             AAATGCTCTGCCAAACTGCGTTCTTTGCAGTCCACTTCGCAATCTGTATTGCCACTTCCA
 
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JMFF026K04+           AATATGAAGTTCGCAAGTGAACCCGACTCTTGTGATGAACCCGACGCAGAAGATTGGCTA
JMFF009N02+           AATATGAAGTTCGCAAGTGAACCCGACTCTTGTGATGAACCCGACGCAGAAGATTGGCTA
JMFS066F09+           AATATGAAGTTCGCAAGTGAACCCGACTCTTGTGATGAACCCGACGCAGAAGATTGGCTA
JMFS073B05+           AATATGAAGTTCGCAAGTGAACCCGACTCTTGTGATGAACCCGACGCAGAAGATTGGCTA
                      ____________________________________________________________
consensus             AATATGAAGTTCGCAAGTGAACCCGACTCTTGTGATGAACCCGACGCAGAAGATTGGCTA
 
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JMFF026K04+           AAGGAAAATTCATCTTTAGAGATGGAGTTTCGCAGCACAGACCCAGTGCTTACCATAATT
JMFF009N02+           AAGGAAAATTCATCTTTAGAGATGGAGTTTCGCAGCACAGACCCAGTGCTTACCATAATT
JMFS066F09+           AAGGAAAATTCATCTTTAGAGATGGAGTTTCGCAGCACAGACCCAGTGCTTACCATAATT
JMFS073B05+           AAGGAAAATTCATCTTTAGAGATGGAGTTTCGCAGCACAGACCCAGTGCTTACCATAATT
                      ____________________________________________________________
consensus             AAGGAAAATTCATCTTTAGAGATGGAGTTTCGCAGCACAGACCCAGTGCTTACCATAATT
 
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JMFF026K04+           CGATCAATCTCTTCACTAAGGGCATTGGCACCACCATATAAATCATCTGGATCTTCACTG
JMFF009N02+           CGATCAATCTCTTCACTAAGGGCATTGGCACCACCATATAAATCATCTGGATCTTCACTG
JMFS066F09+           CGATCAATCTCTTCACTAAGGGCATTGGCACCACCATATAAATCATCTGGATCTTCACTG
JMFS073B05+           CGATCAATCTCTTCACTAAGGGCATTGGCACCACCATATAAATCATCTGGATCTTCACTG
                      ____________________________________________________________
consensus             CGATCAATCTCTTCACTAAGGGCATTGGCACCACCATATAAATCATCTGGATCTTCACTG
 
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JMFF026K04+           GGCACCCTATCTAACGATAAGTCCATCCATTCATCAAGGAACTTCCTACGGCGCTCTCTT
JMFF009N02+           GGCACCCTATCTAACGATAAGTCCATCCATTCATCAAGGAACTTCCTACGGCGCTCTCTT
JMFS066F09+           GGCACCCTATCTAACGATAAGTCCATCCATTCATCAAGGAACTTCCTACGGCGCTCTCTT
JMFS073B05+           GGCACCCTATCTAACGATAAGTCCATCCATTCATCAAGGAACTTCCTACGGCGCTCTCTT
                      ____________________________________________________________
consensus             GGCACCCTATCTAACGATAAGTCCATCCATTCATCAAGGAACTTCCTACGGCGCTCTCTT
 
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JMFF026K04+           ACACTTCTGGGCCTTCGAACCCACAAATCATATTCATAGCTATCAGAGGTAGACTCCAGG
JMFF009N02+           ACACTTCTGGGCCTTCGAACCCACAAATCATATTCATAGCTATCAGAGGTAGACTCCAGG
JMFS066F09+           ACACTTCTGGGCCTTCGAACCCACAAATCATATTCATAGCTATCAGAGGTAGACTCCAGG
JMFS073B05+           ACACTTCTGGGCCTTCGAACCCACAAATCATATTCATAGCTATCAGAGGTAGACTCCAGG
                      ____________________________________________________________
consensus             ACACTTCTGGGCCTTCGAACCCACAAATCATATTCATAGCTATCAGAGGTAGACTCCAGG
 
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JMFF026K04+           CAACTAGAACATAAATCAGATCCCTGAGCAATAGTCTCAGGGGCACCAAA          
JMFF009N02+           CAACTAGAACATAAATCAGATCCCTGAGCAATAGTCTCAGGGGCATCAAA          
JMFS066F09+           CAACTAGAACATAAATCAGATCCCTGAGCAATAGTCTCAGGGGCATCAAAATACCGACAT
JMFS073B05+           CAACTAGAACATAAATCAGATCCCTGAGCAATAGTCTCAGGGGCATCAAAATACCGACAT
                      ____________________________________________________________
consensus             CAACTAGAACATAAATCAGATCCCTGAGCAATAGTCTCAGGGGCATCAAAATACCGACAT
 
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JMFS066F09+           TCCCCTTCATCGTCACTGAAGCTACCCATGGTACCTCGAGTTCACCCCATGAAATCCCAC
JMFS073B05+           TCCCCTTCATCGTCACTGAAGCTACCCATGGTACCTCGAGTTCACCCCATGAAATCCCAC
                      ____________________________________________________________
consensus             TCCCCTTCATCGTCACTGAAGCTACCCATGGTACCTCGAGTTCACCCCATGAAATCCCAC
 
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JMFS066F09+           CTCAAGACATCACCTCTGTTAGCCATAGACAATGTAGGTAATTTGTTCCCTTATGATAGA
JMFS073B05+           CTCAAGACATCACCTCTGTTAGCCATAGACAATGTAGGTAATTTGTTCCCTTATGATAGA
                      ____________________________________________________________
consensus             CTCAAGACATCACCTCTGTTAGCCATAGACAATGTAGGTAATTTGTTCCCTTATGATAGA
 
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JMFS066F09+           ACATGGGTATAATTGAATCTGTGCAGGATAAAATTGGTCAGCATTGATAGCAAGATTTAC
JMFS073B05+           ACATGGGTATAATTGAATCTGTGCAGGATAAAATTGGTCAGCATTGATAGCAAGATTTAC
                      ____________________________________________________________
consensus             ACATGGGTATAATTGAATCTGTGCAGGATAAAATTGGTCAGCATTGATAGCAAGATTTAC
 
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JMFS066F09+           GAAGGCGTAAATATGGGTCTTCGTTCCTCTCTCTATCGCCTCTTAAGCAAAGAAGAG   
JMFS073B05+           GAAGGCGTAAATATGGGTCTTCGTTCCTCTCTCTATCGCCTCTTAAGCAAAGAAGAGAGA
                      ____________________________________________________________
consensus             GAAGGCGTAAATATGGGTCTTCGTTCCTCTCTCTATCGCCTCTTAAGCAAAGAAGAGAGA