Contig 000448:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS035H06Sequence578000448 (5)ref|XP_006366033.1|1e-35PREDICTED: COBRA-like protein 10-like [Solanum tuberosum]
JMFS040E07Sequence636000448 (5)ref|XP_009796714.1|3e-42PREDICTED: COBRA-like protein 10 [Nicotiana sylvestris] ref|XP_009796715.1| PRED
JMFS067D02Sequence627000448 (5)ref|XP_009796714.1|2e-42PREDICTED: COBRA-like protein 10 [Nicotiana sylvestris] ref|XP_009796715.1| PRED
JMFS072A10Sequence622000448 (5)ref|XP_009796714.1|2e-12PREDICTED: COBRA-like protein 10 [Nicotiana sylvestris] ref|XP_009796715.1| PRED
JMFS074H12Sequence636000448 (5)ref|XP_009796714.1|7e-53PREDICTED: COBRA-like protein 10 [Nicotiana sylvestris] ref|XP_009796715.1| PRED

Alignment

This contig is upended


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JMFS074H12+                TCTGCGCCTGCATCTGGGTGAAATCTCCGGCGGTGTCGATGGCCGTCTTCAAATC
JMFS067D02+                                                                TCAAATC
JMFS040E07+                                                                TCAAATC
                      ____________________________________________________________
consensus                  TCTGCGCCTGCATCTGGGTGAAATCTCCGGCGGTGTCGATGGCCGTCTTCAAATC
 
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JMFS074H12+           CGTCATGGGATCTCCGGCGAACACCGTCCCGTTCTTCCCCACCTTGATCGGGAAGTCGTC
JMFS067D02+           CGTCATGGGATCTCCGGCGAACACCGTCCCGTTCTTCCCCACCTTGATCGGGAAGTCGTC
JMFS035H06+                                                     CTTGATCGGGAAGTCGTC
JMFS040E07+           CGTCATGGGATCTCCGGCGAACACCGTCCCGTTCTTCCCCACCTTGATCGGGAAGTCGTC
                      ____________________________________________________________
consensus             CGTCATGGGATCTCCGGCGAACACCGTCCCGTTCTTCCCCACCTTGATCGGGAAGTCGTC
 
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JMFS074H12+           GCCGTCGACCACGACCGCCCCTTCCGCCGACACCAACAGCTCGCGGTATTGGAACCCTAC
JMFS067D02+           GCCGTCGACCACGACCGCCCCTTCCGCCGACACCAACAGCTCGCGGTATTGGAACCCTAC
JMFS035H06+           GCCGTCGACCACGACCGCCCCTTCCGCCGACACCAACAGCTCGCGGTATTGGAACCCTAC
JMFS040E07+           GCCGTCGACCACGACCGCCCCTTCCGCCGACACCAACAGCTCGCGGTATTGGAACCCTAC
                      ____________________________________________________________
consensus             GCCGTCGACCACGACCGCCCCTTCCGCCGACACCAACAGCTCGCGGTATTGGAACCCTAC
 
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JMFS074H12+           GAACGCCTTCCAGTTTTTGAGCTCCACTTTGCCGGCGTTCAGGATGGACAGCGTGGCCTT
JMFS067D02+           GAACGCCTTCCAGTTTTTGAGCTCCACTTTGCCGGCGTTCAGGATGGACAGCGTGGCCTT
JMFS035H06+           GAACGCCTTCCAGTTTTTGAGCTCCACTTTGCCGGCGTTCAGGATGGACAGCGTGGCCTT
JMFS040E07+           GAACGCCTTCCAGTTTTTGAGCTCCACTTTGCCGGCGTTCAGGATGGACAGCGTGGCCTT
JMFS072A10+                                                TTCAGGATGGACAGCGTGGCC-T
                      ____________________________________________________________
consensus             GAACGCCTTCCAGTTTTTGAGCTCCACTTTGCCGGCGTTCAGGATGGACAGCGTGGCCTT
 
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JMFS074H12+           GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
JMFS067D02+           GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
JMFS035H06+           GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
JMFS040E07+           GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
JMFS072A10+           GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
                      ____________________________________________________________
consensus             GAAGGACCAGGCCTGCGCCGACGTGTTCTTCACCAGGGGATAGATCTTCTCCCGCCCCTG
 
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JMFS074H12+           GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
JMFS067D02+           GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
JMFS035H06+           GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
JMFS040E07+           GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
JMFS072A10+           GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
                      ____________________________________________________________
consensus             GAAGCTGTAGGTGAGGAATATGCCGTCGCATTTCTGCTGCTCCGGCGGCGGGGCGGCCGG
 
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JMFS074H12+           CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
JMFS067D02+           CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
JMFS035H06+           CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
JMFS040E07+           CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
JMFS072A10+           CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
                      ____________________________________________________________
consensus             CTTGTCACCGTCCTCGTCGTAGTCATAATCGTCGTCGACTTTGGCGGCTTTGGCGGCTTT
 
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JMFS074H12+           GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
JMFS067D02+           GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
JMFS035H06+           GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
JMFS040E07+           GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
JMFS072A10+           GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
                      ____________________________________________________________
consensus             GGCGGCCTGGGAGGTGTAACAGAGGGCGGCGATGCAGTAAGCAAAGGCCAATATCCTCCA
 
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JMFS074H12+           TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
JMFS067D02+           TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
JMFS035H06+           TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
JMFS040E07+           TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
JMFS072A10+           TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
                      ____________________________________________________________
consensus             TGATATTCTCATACTATACCTGGAGGTAGGTATTAGGGTTTTTTTTTGGATAGGAAATTA
 
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JMFS074H12+           ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
JMFS067D02+           ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
JMFS035H06+           ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
JMFS040E07+           ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
JMFS072A10+           ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
                      ____________________________________________________________
consensus             ATTTAAGGTTTATTTGTTTTTGTGGCTAATTAGGTTTTCGGCCGGGTACGGTGGATTTAC
 
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JMFS074H12+           ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCG                   
JMFS067D02+           ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCGGCCACTACCAGAACGAAGC
JMFS035H06+           ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCGGCCACTACCAGAACGAAGC
JMFS040E07+           ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCGGCCACTACCAGAACGAAGC
JMFS072A10+           ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCGGCCACTACCAGAACGAAGC
                      ____________________________________________________________
consensus             ACGGCCGCAGGGGAAATGAAAAGCGGAAAAACACGACGGCGGCCACTACCAGAACGAAGC
 
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JMFS067D02+           AGGTGAGAGGCCGCAGCGTA                                        
JMFS035H06+           AGGTGAGAGGCCGCAGCGTA                                        
JMFS040E07+           AGGTGAGAGGCCGCAGCGTACGTGAGAG                                
JMFS072A10+           AGGTGAGAGGCCGCAGCGTACGTGAGAGGGAGGGTGAGCGATTGATGGATGTATCGGAGA
                      ____________________________________________________________
consensus             AGGTGAGAGGCCGCAGCGTACGTGAGAGGGAGGGTGAGCGATTGATGGATGTATCGGAGA
 
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JMFS072A10+           TGAAAAGAAAAATAATGAAGAAGAAATGATGGAGAAGAGGAAGGAGGATTTCCGACACCG
                      ____________________________________________________________
consensus             TGAAAAGAAAAATAATGAAGAAGAAATGATGGAGAAGAGGAAGGAGGATTTCCGACACCG
 
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JMFS072A10+           CTAAAAATGGCGTGGCTGATAATAATGCACAAAGACCTTTTCTTCGCCATTCTCATCCGA
                      ____________________________________________________________
consensus             CTAAAAATGGCGTGGCTGATAATAATGCACAAAGACCTTTTCTTCGCCATTCTCATCCGA