Contig 000445:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS144D09+                                  GTCATCCACTTGTTNTGTTTTCAAATTCTTGGAACTA
                      ____________________________________________________________
consensus                                    GTCATCCACTTGTTNTGTTTTCAAATTCTTGGAACTA
 
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JMFS144D09+           TCATGTAAACAAGAAGAAAGACTCGCTTTTCCACTAGTTCCAGGTCGGTAACATAGCAAT
                      ____________________________________________________________
consensus             TCATGTAAACAAGAAGAAAGACTCGCTTTTCCACTAGTTCCAGGTCGGTAACATAGCAAT
 
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JMFS144D09+           GGATTACGGCCTTCATGGTAGTTCAATGAGCACGAAATACTTCTCCCACCTAGTAACCTA
JMFS068D05+                  GGCCTTCATGGTAGTTCAATGAGCACGAAATACTTCTCCCACCTAGTAACCTA
JMFS070H06+                                                     CTCCCACCTAGTAACCTA
                      ____________________________________________________________
consensus             GGATTACGGCCTTCATGGTAGTTCAATGAGCACGAAATACTTCTCCCACCTAGTAACCTA
 
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JMFS144D09+           AAAATACCAAAATCCGACATTCTGGTAATATTAGCACTACTATCTCCATCCGACTGCATA
JMFS068D05+           AAAATACCAAAATCCGACATTCTGGTAATATTAGCACTACTATCTCCATCCGACTGCATA
JMFS070H06+           AAAATACCAAAATCCGACATTCTGGTAATATTAGCACTACTATCTCCATCCGACTGCATA
                      ____________________________________________________________
consensus             AAAATACCAAAATCCGACATTCTGGTAATATTAGCACTACTATCTCCATCCGACTGCATA
 
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JMFS144D09+           GGTGCTTTGTTTGATTTAACCAACGACAATCCATCCACAGTCAATTCAGAACCTTCTTTT
JMFS068D05+           GGTGCTTTGTCTGATTTAACCAACGACAATCCATCCACAGTCAATTCAGAACCTTCTTTT
JMFS070H06+           GGTGCTTTGTCTGATTTAACCAACGACAATCCATCCACAGTCAATTCAGAACCTTCTTTT
                      ____________________________________________________________
consensus             GGTGCTTTGTCTGATTTAACCAACGACAATCCATCCACAGTCAATTCAGAACCTTCTTTT
 
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JMFS144D09+           TTAGGTAAAAACTCAGGCAATGTTGAAGGGAAGCAAAACAAGTTTGCATTTGGGCATGCA
JMFS068D05+           TTAGGTAAAAACTCAGGCAATGTTGAAGGGAAGCAAAACAAGTTTGCATTTGGGCATGCA
JMFS070H06+           TTAGGTAAAAACTCAGGCAATGTTGAAGGGAAGCAAAACAAGTTTGCATTTGGGCATGCA
                      ____________________________________________________________
consensus             TTAGGTAAAAACTCAGGCAATGTTGAAGGGAAGCAAAACAAGTTTGCATTTGGGCATGCA
 
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JMFS144D09+           ATGTCAAGACTTAACTGAGGTGCAGAAACTTGTGTCAATTCTGAGCCTATATCTCCACCC
JMFS068D05+           ATGTCAAGACTTAACTGAGGTGCAGAAACTTGTGTCAATTCTGAGCCTATATCTCCACCC
JMFS070H06+           ATGTCAAGACTTAACTGAGGTGCAGAAACTTGTGTCAATTCTGAGCCTATATCTCCACCC
                      ____________________________________________________________
consensus             ATGTCAAGACTTAACTGAGGTGCAGAAACTTGTGTCAATTCTGAGCCTATATCTCCACCC
 
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JMFS144D09+           AAAACACCAGGAAAATTTGTATCCACCCCTCTGTAGGATCTATAAGCATCACAGTTAACC
JMFS068D05+           AAAACACCAGGAAAATTTGTATCCACCCCTCTGTAGGATCTATAAGCATCACAGTTAACC
JMFS070H06+           AAAACACCAGGAAAATTTGTATCCACCCCTCTGTAGGATCTATAAGCATCACAGTTAACC
                      ____________________________________________________________
consensus             AAAACACCAGGAAAATTTGTATCCACCCCTCTGTAGGATCTATAAGCATCACAGTTAACC
 
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JMFS144D09+           TCATTTCCAGTTTCTTGACAAGGTTCACATTTAGCCACAGTAAGAAGGGCAGATAACAGA
JMFS068D05+           TCATTTCCAGTTTCTTGACAAGGTTCACATTTAGCCACAGTAAGAAGGGCAGATAACAGA
JMFS070H06+           TCATTTCCAGTTTCTTGACAAGGTTCACATTTAGCCACAGTAAGAAGGGCAGATAACAGA
                      ____________________________________________________________
consensus             TCATTTCCAGTTTCTTGACAAGGTTCACATTTAGCCACAGTAAGAAGGGCAGATAACAGA
 
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JMFS144D09+           ATGACAAGGTGAAACACAGCCCAAGAAGAACGCTGCGGCTGAGGTTTGATCATTTTCAGG
JMFS068D05+           ATGACAAGGTGAAACACAGCCCAAGAAGAACGCTGCGGCTGAGGTTTGATCATTTTCAGG
JMFS070H06+           ATGACAAGGTGAAACACAGCCCAAGAAGAACGCTGCGGCTGAGGTTTGATCATTTTCAGG
                      ____________________________________________________________
consensus             ATGACAAGGTGAAACACAGCCCAAGAAGAACGCTGCGGCTGAGGTTTGATCATTTTCAGG
 
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JMFS144D09+           AAGAGGAAGAATAAGAAGAAGAAGAACTCCATGGCTGAGAAAGCGAA             
JMFS068D05+           AAGAGGAAGAATAAGAAGAAGAAGAACTCCATGGCTGAGAAAGCGAAGAAACCATCCGCA
JMFS070H06+           AAGAGGAAGAATAAGAAGAAGAAGAACTCCATGGCTGAGAAAGCGAAGAAACCATCCGCA
                      ____________________________________________________________
consensus             AAGAGGAAGAATAAGAAGAAGAAGAACTCCATGGCTGAGAAAGCGAAGAAACCATCCGCA
 
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JMFS068D05+           AATCTAGAAGATTCCTTTCCTTGTTGTGTTTCAGTTTTAGGGATTTTTGTTGGAATCGAT
JMFS070H06+           AATCTAGAAGATTCCTTTCCTTGTTGTGTTTCAGTTTTAGGGATTTTTGTTGGAATCGAT
                      ____________________________________________________________
consensus             AATCTAGAAGATTCCTTTCCTTGTTGTGTTTCAGTTTTAGGGATTTTTGTTGGAATCGAT
 
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JMFS068D05+           TTCGTCCAGGAAAATGCTTGGAGCAAAAGCACACCTGATAACAG                
JMFS070H06+           TTCGTCCAGGAAAATGCTTGGAGCAAAAGCACACCTGATAACAGCGATGAATGAATGAAT
                      ____________________________________________________________
consensus             TTCGTCCAGGAAAATGCTTGGAGCAAAAGCACACCTGATAACAGCGATGAATGAATGAAT