Contig 000444:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011H12Sequence490000444 (4)ref|XP_009618751.1|101PREDICTED: uncharacterized protein LOC104110895 [Nicotiana tomentosiformis]748012253 (4)ref|XP_009618751.1|141PREDICTED: uncharacterized protein LOC104110895 [Nicotiana tomentosiformis]
JMFS069D05Sequence623000444 (4)ref|XP_009618751.1|147PREDICTED: uncharacterized protein LOC104110895 [Nicotiana tomentosiformis]
JMSF001J16Sequence339000444 (4)677012253 (4)ref|XP_009618751.1|152PREDICTED: uncharacterized protein LOC104110895 [Nicotiana tomentosiformis]
JMSF011G14Sequence425000444 (4)ref|XP_009763999.1|114PREDICTED: uncharacterized protein LOC104215799 [Nicotiana sylvestris]780012253 (4)ref|XP_009618751.1|141PREDICTED: uncharacterized protein LOC104110895 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF011G14+                                               GCCTTCTTGTTGCTGATAATGGAC
JMFS069D05+                                                  TTCTTGTTGCTGATAATGGAC
                      ____________________________________________________________
consensus                                                 GCCTTCTTGTTGCTGATAATGGAC
 
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JMSF011G14+           GCTCGAACTCCTCTGGTTTTGGAGACACAGCCTATCCCTTTCCTCGCCCAGATTCATCCC
JMFS069D05+           GCTCGAACTCCTCTGGTTTTGGAGACACAGCCTATCCCTTTCCTCGCTCAGATTCATCCC
                      ____________________________________________________________
consensus             GCTCGAACTCCTCTGGTTTTGGAGACACAGCCTATCCCTTTCCTCGCTCAGATTCATCCC
 
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JMSF011G14+           TTCCTGGGCCTGTTCTAATTTCCTGAAACTCAAATCCCCACTTCTTCTCTTCGACAAGCT
JMFF011H12+                        TCTAATTTCCTGAAACTCAAATCCCCACTTCTTCTCTTCGACAAGCT
JMFS069D05+           GTCCTGCGCTTGTTCTACTTTCCTGAAACTCAAATCCCCACTTCTTCGCGTCGACAAGCT
                      ____________________________________________________________
consensus             TTCCTGGGCTTGTTCTAATTTCCTGAAACTCAAATCCCCACTTCTTCTCTTCGACAAGCT
 
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JMSF011G14+           TCTGCTGTGCTTCACCTTCTTCTTACTCTTCACCCGGACTTGCCCAATGCAAGTAACCTT
JMFF011H12+           TCTGCTGTGCTTCACCTTCTTCTTACTCTTCACCCGGACTTGCCCAATGCAAGTAACCTT
JMFS069D05+           TCTGCTGTGCTTCACCTTCTTCTTAGTCTTCACCCGGACTTGCCCAATGCAAGTAACCTT
                      ____________________________________________________________
consensus             TCTGCTGTGCTTCACCTTCTTCTTACTCTTCACCCGGACTTGCCCAATGCAAGTAACCTT
 
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JMSF011G14+           AGGGGAAGACGGCTCCGGATTCTCGAAACCCGACCCGCGCTTCTTGGCGGAACTGGGGAA
JMFF011H12+           AGGGGAAGACGGCTCCGGATTCTCGAAACCCGACCCGCGCTTCTTGGCGGAACTGGGGAA
JMSF001J16+                                                               CTGGGGAA
JMFS069D05+           GGGGGAAGACGGCTCCGGATTCTCGAAAGCAGAGCCGCGCTTCTTGGCGGAACTGGGGAA
                      ____________________________________________________________
consensus             AGGGGAAGACGGCTCCGGATTCTCGAAACCCGACCCGCGCTTCTTGGCGGAACTGGGGAA
 
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JMSF011G14+           CATGGGGGAAGCCTGACCCGCCTTGATGCTGCCATTGGAGCGCAGCCTCCGGCTAAGGGA
JMFF011H12+           CATGGGGGAAGCCTGACCCGCCTTGATGCTGCCATTGGAGCGCAGCCTCCGGCTAAGGGA
JMSF001J16+           CATGGGGGAAGCCTGACCCGCCTTGATGCTGCCATTGGAGCGCAGCNTCCGGCTAAGGGA
JMFS069D05+           CATGGGGGAAGCCTGACCGGCCTTGATGCTGCCATTGGAGCGGAGCCTCCGGCTAAGGGA
                      ____________________________________________________________
consensus             CATGGGGGAAGCCTGACCCGCCTTGATGCTGCCATTGGAGCGCAGCCTCCGGCTAAGGGA
 
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JMSF011G14+           AGTTGAGAGAGAAACAGAAGGGTCTCGAGCCCGACCCGGACTGAGTATAGATTTGGAAAG
JMFF011H12+           AGTTGAGAGAGAAACAGAAGGGTCTCGAGCCCGACCCGGACTGAGTATAGATTTGGAAAG
JMSF001J16+           AGTTGAGAGAGAAACAGAAGGGTCTCGAGCCCGACCCGGACTGAGTATAGATTTGGAAAG
JMFS069D05+           AGTTGAGAGAGAAACGGAGGGGTCTCGAGCCCGACCCGGACTGAGTATAGATTTGGAAAG
                      ____________________________________________________________
consensus             AGTTGAGAGAGAAACAGAAGGGTCTCGAGCCCGACCCGGACTGAGTATAGATTTGGAAAG
 
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JMSF011G14+           CTTCATGGAAGAGGAAGAAGAAAGACGAGAAGTGAAA                       
JMFF011H12+           CTTCATGGAAGAGGAAGAAGAAAGACGAGAAGTGAAACAAACAAAGAGCTCACCAGTAGG
JMSF001J16+           CTTCATGGAAGAGGAAGAAGAAAGACGAGAAGTGAAACAAACAAAGAGCTCACCAGTAGG
JMFS069D05+           CTTCATTGAAGAGGAAGAAGAAAGACGAGATGTGAAACAAACAAAGAGCTCACCAGTAGG
                      ____________________________________________________________
consensus             CTTCATGGAAGAGGAAGAAGAAAGACGAGAAGTGAAACAAACAAAGAGCTCACCAGTAGG
 
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JMFF011H12+           GGTACTAGTAGTAGTA                                            
JMSF001J16+           GGTACTAGTAGTAGTA                                            
JMFS069D05+           GGTAGTAGTAGTAGTACTTGCGCTTGGAGTTCTGTGATGGGGGGGTCTATCCAAGTCCAT
                      ____________________________________________________________
consensus             GGTACTAGTAGTAGTACTTGCGCTTGGAGTTCTGTGATGGGGGGGTCTATCCAAGTCCAT
 
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JMFS069D05+           ACCGTCAAAATTTTACCTTGTTGTTTTGCCCATGAACTGTTTGATAGTGGGTCTGAGTAC
                      ____________________________________________________________
consensus             ACCGTCAAAATTTTACCTTGTTGTTTTGCCCATGAACTGTTTGATAGTGGGTCTGAGTAC
 
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JMFS069D05+           TGAAAGACTGCACAAATGGTGAACGATAATTGAAGCGAGGAGAGGAGAATTGGTTCTGTA
                      ____________________________________________________________
consensus             TGAAAGACTGCACAAATGGTGAACGATAATTGAAGCGAGGAGAGGAGAATTGGTTCTGTA