Contig 000442:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046A23+                                     CGCCAGAAGAGGAGCCGGAAAACGAAGGCTGAG
                      ____________________________________________________________
consensus                                        CGCCAGAAGAGGAGCCGGAAAACGAAGGCTGAG
 
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rJMSF046A23+          ACGAAAATGATGGCGACCTCGNCGACACCAACGACGACCCGTNTCCGAACCCGGGCATCA
                      ____________________________________________________________
consensus             ACGAAAATGATGGCGACCTCGNCGACACCAACGACGACCCGTNTCCGAACCCGGGCATCA
 
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rJMSF046A23+          AATTNGGAGCCGAGTGATTGTTATGGGGCATTGCCAACCCCTTTTTCCCCAGCTGATACT
JMFS100B11+                                              AACCCCTTTTTCCCCAGCTGATACT
                      ____________________________________________________________
consensus             AATTNGGAGCCGAGTGATTGTTATGGGGCATTGCCAACCCCTTTTTCCCCAGCTGATACT
 
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rJMSF046A23+          CCACCGTNCTATACGTCGGGAAAAGCTCCGCCGGGATGTTGTTCTCGCTGATGGCGAGAT
JMFS100B11+           CCACCGTACTATACGTCGGGAAAAGCTCCGCCGGGATGTTGTTCTCGCTGATGGCGAGAT
                      ____________________________________________________________
consensus             CCACCGTACTATACGTCGGGAAAAGCTCCGCCGGGATGTTGTTCTCGCTGATGGCGAGAT
 
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rJMSF046A23+          ACGATTTGGNGAAGGGGTTTTTCCGGTAGCAAAACGGGCAGGACCAAATTCTGGTGGTGT
JMFS100B11+           ACGATTTGGGGAAGGGGTTTTTCCGGTAGCAAAACGGGCAGGACCAAATTCTGGTGGTGT
                      ____________________________________________________________
consensus             ACGATTTGGGGAAGGGGTTTTTCCGGTAGCAAAACGGGCAGGACCAAATTCTGGTGGTGT
 
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rJMSF046A23+          AATCGACGCGGGCATAGGGATTCAAAACCGCGCCGCAGTCGGAGCAGATGAGAGGGTCGT
JMFS100B11+           AATCGACGCGGGCATAGGGATTCAAAACCGCGCCGCAGTCGGAGCAGATGAGAGGGTCGT
                      ____________________________________________________________
consensus             AATCGACGCGGGCATAGGGATTCAAAACCGCGCCGCAGTCGGAGCAGATGAGAGGGTCGT
 
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rJMSF046A23+          AAGGGAGCAGCGGGAGCTCATTGAAAGCCATCAGCGGCGTGGCCATGATCGCGAGAGGGA
JMFS100B11+           AAGGGAGCAGCGGGAGCTCATTGAAAGCCATCAGCGGCGTGGCCATGATCGCGAGAGGGA
                      ____________________________________________________________
consensus             AAGGGAGCAGCGGGAGCTCATTGAAAGCCATCAGCGGCGTGGCCATGATCGCGAGAGGGA
 
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rJMSF046A23+          CTACTAAACCCGAAGCTTCGGATTTCGAAACGGGCCAGGAGTTCCACGACCATCGGAGGC
JMFS100B11+           CTACTAAACCCGAAGCTTCGGATTTCGAAACGGGCCAGGAGTTCCACGACCATCGGAGGC
                      ____________________________________________________________
consensus             CTACTAAACCCGAAGCTTCGGATTTCGAAACGGGCCAGGAGTTCCACGACCATCGGAGGC
 
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rJMSF046A23+          CCTCGATCGCCTCCAGCTCCACGAAATCCATGGGCGACCCAGTTCGAGAAATCAGCTGGA
JMFS100B11+           CCTCGATCGCCTCCAGCTCCACGAAATCCATGGGCGACCCAGTTCGAGAAATCAGCTGGA
JMFS068H01+                                  AAATCCATGGGCGACCCAGTTCGAGAAATCAGCTGGA
                      ____________________________________________________________
consensus             CCTCGATCGCCTCCAGCTCCACGAAATCCATGGGCGACCCAGTTCGAGAAATCAGCTGGA
 
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rJMSF046A23+          TTCGACGGAAACTTGGGTGGATTGCATTAAAAATTCAGTACTGTAGATTTGGGTAGCTAG
JMFS100B11+           TTCGACGGAAACTTGGGTGGATTGCATTAAAAATTCAGTACTGTAGATTTGGGTAGCTAG
JMFS068H01+           TTCGACGGAAACTTGGGTGGATTGCATTAAAAATTCAGTACTGTAGATTTGGGTAGCTAG
                      ____________________________________________________________
consensus             TTCGACGGAAACTTGGGTGGATTGCATTAAAAATTCAGTACTGTAGATTTGGGTAGCTAG
 
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rJMSF046A23+          GGCTTAAGGGGCTGAAAACCCCTATCTGGGATTTGGTATTCTCGGAGGGGAGATCTGGAA
JMFS100B11+           GGCTTAAGGGGCTGAAAACCCCTATCTGGGATTTGGTATTCTCGGAGGGGAGATCTGGAA
JMFS068H01+           GGCTTAAGGGGCTGAAAACCCCTATTTGGGATTTGGTATTCTCGGAGGGGAGATCTGGAA
                      ____________________________________________________________
consensus             GGCTTAAGGGGCTGAAAACCCCTATCTGGGATTTGGTATTCTCGGAGGGGAGATCTGGAA
 
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rJMSF046A23+          TTCCA                                                       
JMFS100B11+           TTCCAGTGAGAGTATTGAATCCAAAGCTTTTATCTTTGCGGCTAAGGATTTCAAGAAA  
JMFS068H01+           TTCCAGTGAGAGTATTGAATCCAAAGCTTTTATCTTTGCGGCTAAGGATTTCAAGAAACC
                      ____________________________________________________________
consensus             TTCCAGTGAGAGTATTGAATCCAAAGCTTTTATCTTTGCGGCTAAGGATTTCAAGAAACC