Contig 000439:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067A11Sequence627000439 (3)ref|XP_009587784.1|4e-74PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMFS114H06Sequence554000439 (3)ref|XP_009587783.1|2e-60PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMSF035H22Sequence702000439 (3)ref|XP_009587784.1|8e-110PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c734024632ref|XP_009771387.1|4e-84PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c

Alignment

This contig is upended


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JMSF035H22+                       ACAGGATTCGAGACGACCCCAAAAACTCTCGTGTCTGCATTCATATTT
                      ____________________________________________________________
consensus                         ACAGGATTCGAGACGACCCCAAAAACTCTCGTGTCTGCATTCATATTT
 
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JMSF035H22+           TCGAGCTGATATACTTCTTTGATGCTATTCAGACATGGCAAGCCAGGAATGGACTTTCCA
                      ____________________________________________________________
consensus             TCGAGCTGATATACTTCTTTGATGCTATTCAGACATGGCAAGCCAGGAATGGACTTTCCA
 
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JMSF035H22+           TTCAAGGATCCACACACAAAGAAAGCACCATATTTTGGACCAAGTAATTGGCTTATAAGA
                      ____________________________________________________________
consensus             TTCAAGGATCCACACACAAAGAAAGCACCATATTTTGGACCAAGTAATTGGCTTATAAGA
 
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JMSF035H22+           CCCCTATCTCCCACAGCCCTTGCAATTAGGGGCACCTGACAATGGGTGAGTGTCTGAAAA
JMFS067A11+                                            ACCTGACAATGGGTGAGTGTCTGAAAA
                      ____________________________________________________________
consensus             CCCCTATCTCCCACAGCCCTTGCAATTAGGGGCACCTGACAATGGGTGAGTGTCTGAAAA
 
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JMSF035H22+           ACCGGGGCTACATCTGTGATATAAGAGACATCAATTACAAGCTTAACGATGTCTGCTCCC
JMFS114H06+                                              TACAAGCTTAACGATGTCTGCTCCC
JMFS067A11+           ACCGGGGCTACATCTGTGATATAAGAGACATCAATTACAAGCTTAACGATGTCTGCTCCC
                      ____________________________________________________________
consensus             ACCGGGGCTACATCTGTGATATAAGAGACATCAATTACAAGCTTAACGATGTCTGCTCCC
 
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JMSF035H22+           GTTGCTTGTAGATTTATGATCAGGTTTCCTAGTTTCTCAGCGGTTGGAGGCCCGCCACCA
JMFS114H06+           GTTGCTTGTAGATTTATGATCAGGTTTCCTAGTTTCTCAGCGGTTGGAGGCCCGCCACCA
JMFS067A11+           GTTGCTTGTAGATTTATGATCAGGTTTCCTAGTTTCTCAGCGGTTGGAGGCCCGCCACCA
                      ____________________________________________________________
consensus             GTTGCTTGTAGATTTATGATCAGGTTTCCTAGTTTCTCAGCGGTTGGAGGCCCGCCACCA
 
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JMSF035H22+           TTCACATAACTCGACACGATTATCTTGGTGTTCAACCGCACACTCATTAACTCCGCCATA
JMFS114H06+           TTCACATAACTCGACACGATTATCTTGGTGTTCAACCGCACACTCATTAACTCCGCCATA
JMFS067A11+           TTCACATAACTCGACACGATTATCTTGGTGTTCAACCGCACACTCATTAACTCCGCCATA
                      ____________________________________________________________
consensus             TTCACATAACTCGACACGATTATCTTGGTGTTCAACCGCACACTCATTAACTCCGCCATA
 
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JMSF035H22+           ACAGCATCAGAAGCCACCTCGAGTGCTACTTCGACGAACTCAACGTCCAAGCGAAGAGCG
JMFS114H06+           ACAGCATCAGAAGCCACCTCGAGTGCTACTTCGACGAACTCAACGTCCAAGCGAAGAGCG
JMFS067A11+           ACAGCATCAGAAGCCACCTCGAGTGCTACTTCGACGAACTCAACGTCCAAGCGAAGAGCG
                      ____________________________________________________________
consensus             ACAGCATCAGAAGCCACCTCGAGTGCTACTTCGACGAACTCAACGTCCAAGCGAAGAGCG
 
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JMSF035H22+           AGTTTGAGAACTTGTAAGCACGTGCTCTTCCAGTCTCCTCCGTTGCCGGAAACCGCCGCC
JMFS114H06+           AGTTTGAGAACTTGTAAGCACGTGCTCTTCCAGTCTCCTCCGTTGCCGGAAACCGCCGCC
JMFS067A11+           AGTTTGAGAACTTGTAAGCACGTGCTCTTCCAGTCTCCTCCGTTGCCGGAAACCGCCGCC
                      ____________________________________________________________
consensus             AGTTTGAGAACTTGTAAGCACGTGCTCTTCCAGTCTCCTCCGTTGCCGGAAACCGCCGCC
 
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JMSF035H22+           GCCGCATTCGGCCTGCAGCAGACAATGGAGGGAAGAGTTCTGGTCCTGAGGATATGTTCA
JMFS114H06+           GCCGCATTCGGCCTGCAGCAGACAATGGAGGGAAGAGTTCTGGTCCTGAGGATATGTTCA
JMFS067A11+           GCCGCATTCGGCCTGCAGCAGACAATGGAGGGAAGAGTTCTGGTCCTGAGGATATGTTCA
                      ____________________________________________________________
consensus             GCCGCATTCGGCCTGCAGCAGACAATGGAGGGAAGAGTTCTGGTCCTGAGGATATGTTCA
 
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JMSF035H22+           ACCTCGGAGATGTGGGAGAAAGACAAGGAATGGATGCAAAGCTCCACAAGATCTGCTCCT
JMFS114H06+           ACCTCGGAGATGTGGGAGAAAGACAAGGAATGGATGCAAAGCTCCACAAGATCTGCTCCT
JMFS067A11+           ACCTCGGAGATGTGGGAGAAAGACAAGGAATGGATGCAAAGCTCCACAAGATCTGCTCCT
                      ____________________________________________________________
consensus             ACCTCGGAGATGTGGGAGAAAGACAAGGAATGGATGCAAAGCTCCACAAGATCTGCTCCT
 
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JMSF035H22+           TCTTCCTTGGCTACTTTCATGCAGCCTAACATCTCTTCCTGGGTTTCGCATTC       
JMFS114H06+           TCTTCCTTGGCTACTTTCATGCAGCCTAACATCTCTTCCTGGGTTTCGCATTCCAACGTT
JMFS067A11+           TCTTCCTTGGCTACTTTCATGCAGCCTAACATCTCTTCCTGGGTTTCGCATTCCAACGTT
                      ____________________________________________________________
consensus             TCTTCCTTGGCTACTTTCATGCAGCCTAACATCTCTTCCTGGGTTTCGCATTCCAACGTT
 
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JMFS114H06+           GTGTAAACCACCATGTCGCTCTTAAACCCCATAATATAATATAATATAATATAATATAAT
JMFS067A11+           GTGTAAACCACCATGTCGCTCTTAAACCCCATAATATAATATAATATAATATAATATAAT
                      ____________________________________________________________
consensus             GTGTAAACCACCATGTCGCTCTTAAACCCCATAATATAATATAATATAATATAATATAAT
 
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JMFS114H06+           ATAATGCAGATAATGAATGGAGCCCAGACAACAACAATAATCCTCAAAT           
JMFS067A11+           ATAATGCAGATAATGAATGGAGCCCAGACAACAACAATAATCCTCAAATGTTTCCCTTCT
                      ____________________________________________________________
consensus             ATAATGCAGATAATGAATGGAGCCCAGACAACAACAATAATCCTCAAATGTTTCCCTTCT