Contig 000438:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F14Sequence257000438 (20)377006264 (18)ref|XP_011074395.1|65.1PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum]
JMFF007M08Sequence257000438 (20)341006264 (18)ref|XP_006342637.1|103PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF009O22Sequence257000438 (20)358006264 (18)ref|XP_006342637.1|109PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF012A06Sequence257000438 (20)365006264 (18)ref|XP_011074396.1|188PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum]
JMFF014G04Sequence255000438 (20)367006264 (18)ref|XP_006342637.1|95.1PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF015I15Sequence257000438 (20)292006264 (18)ref|XP_006342637.1|102PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF017P20Sequence258000438 (20)326006264 (18)ref|XP_006342637.1|102PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF033B17Sequence255000438 (20)349006264 (18)ref|XP_006342637.1|103PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFF041B06Sequence653000438 (20)ref|XP_008345982.1|151PREDICTED: polyadenylate-binding protein 2-like [Malus domestica]619006264 (18)ref|XP_011074396.1|209PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum]
JMFN010O06Sequence625000438 (20)ref|XP_008345982.1|140PREDICTED: polyadenylate-binding protein 2-like [Malus domestica]
JMFS003F05Sequence562000438 (20)ref|XP_007153580.1|9e-25hypothetical protein PHAVU_003G0475000g, partial [Phaseolus vulgaris] gb|ESW2557
JMFS015D08Sequence572000438 (20)ref|XP_007153580.1|1e-23hypothetical protein PHAVU_003G0475000g, partial [Phaseolus vulgaris] gb|ESW2557
JMFS053E11Sequence612000438 (20)ref|XP_008345982.1|120PREDICTED: polyadenylate-binding protein 2-like [Malus domestica]
JMFS065C05Sequence427000438 (20)
JMSF017P15Sequence259000438 (20)159006264 (18)
JMSF018N19Sequence258000438 (20)199000438 (20)
JMSF025G04Sequence258000438 (20)379006264 (18)ref|XP_006342637.1|125PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMSF033J19Sequence258000438 (20)437006264 (18)ref|XP_006342637.1|134PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMSF043A15Sequence256000438 (20)367006264 (18)ref|XP_006342637.1|134PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041B06+ TCCT
                      ____________________________________________________________
consensus TCCT
 
. : . : . : . : . : . :
JMFN010O06+ CAGGAGTGAAGTTCAATACTTCCATTGCTCTTGCAGCATCCTG
JMFS053E11+ GCTCTNGCAGCATCTTG
JMFF041B06+ AATAGACTTGCTATTGACAGGAGTGAAGTTCAATACTTCCATTGCTCTTGCAGCATCCTG
                      ____________________________________________________________
consensus AATAGACTTGCTATTGACAGGAGTGAAGTTCAATACTTCCATTGCTCTTGCAGCATCCTG
 
. : . : . : . : . : . :
JMFN010O06+ AGGACTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACA
JMFS053E11+ AGTTCTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGATAGTTGATGTCCCGACA
JMFS015D08+ AGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACA
JMFS003F05+ ACTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACA
JMFF041B06+ AGGACTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACA
                      ____________________________________________________________
consensus AGGACTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACA
 
. : . : . : . : . : . :
JMFN010O06+ GACCCTAACTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
JMFS053E11+ GACCTTATCTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
JMFS015D08+ GACCCTAACTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
JMFS003F05+ GACCCTAACTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
JMFF041B06+ GACCCTAACTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
                      ____________________________________________________________
consensus GACCCTAACTGATACCACCTGGCCCACCTGGTTAAACAGATCGTAGAGCTGCGAGTCAGT
 
. : . : . : . : . : . :
JMFN010O06+ GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
JMFS053E11+ GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
JMFS015D08+ GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
JMFS003F05+ GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
JMFF041B06+ GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
                      ____________________________________________________________
consensus GACGGTAGGGTCCAGGTCCCCAACGTACAAAGACGTGGTGGATAACTGGTTTCCAGCCCC
 
. : . : . : . : . : . :
JMFN010O06+ GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
JMFS053E11+ GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
JMFS015D08+ GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
JMFS003F05+ GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
JMFF041B06+ GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
                      ____________________________________________________________
consensus GGCGGCGGACTGGGGAGCAGGGAGGCCGACAGCACCCGGCGGCGGAACTCCATTTGCTAG
 
. : . : . : . : . : . :
JMFN010O06+ CGCCACCGGACTCTGA------TGCTGCACCTGAATCTGAGCCATTATTTCCAATCTATA
JMFS053E11+ CGCCACCGGACTCTGA------TGCTGCACCTGAATCTGAGCCATTATTTCCAATCTATA
JMFS015D08+ CGCCACCGGACTCTGA------TGCTGCACCTGAATCTGAGCCATTATTTCCAATCTATA
JMFS003F05+ CGCCACCGGACTCAGATTCAGGTGCAGCATCAGAATCTGAGCCATTATTTCCAATCTATA
JMFF041B06+ CGCCACCGGACTCTGA------TGCTGCACCTGAATCTGAGCCATTATTTCCAATCTATA
                      ____________________________________________________________
consensus CGCCACCGGACTCTGA------TGCTGCACCTGAATCTGAGCCATTATTTCCAATCTATA
 
. : . : . : . : . : . :
JMFN010O06+ CTCTCAAACACTAACAAACAAATTCACTTCTAC-TTTTTTTTTTTTTTTTTACTTTTTAA
JMFS053E11+ CTCTCAAACACTAACAAACAAATTCACTTCTAC-TTTTTTTTTTTTTTTTTACTTTTTAA
JMFS015D08+ CTCTCAAACACTAACAAACAAATTCACTTCTACTTTTTTTTTTTTTTTTTTACTTTTTAA
JMFS003F05+ CTCTCAAACACTAACAAACAAATTCACTTCTAC-TTTTTTTTTTTTTTTTTACTTTTTAA
JMFF041B06+ CTCTCAAACACTAACAAACAAATTCACTTCTAC-TTTTTTTTTTTTTTTTTACTTTTTAA
JMFF033B17+ TTTTTTTTTTACTTTTTAA
JMSF043A15+ TTTTTTTTTTACTTTTTAA
JMFF017P20+ TTTTTTTTTTACTTTNTAA
JMFF009O22+ TTTTTTTTTTACTTTTTAA
JMFF005F14+ TTTTTTTTTTACTTTTTAA
JMFF012A06+ TTTTTTTTTTACTTTTTAA
JMFF015I15+ TTTTTTTTTTACTTTTTAA
JMFF007M08+ TTTTTTTTTTACTTTTTAA
JMFF014G04+ TTTTTTTTTTACTTTTTAA
JMSF018N19+ TTTTTTTTTTACTTTTTAA
JMSF033J19+ TTTTTTTTTTACTTTTTAA
JMSF017P15+ TTTTTTTTTTACTTTTTAA
JMSF025G04+ TTTTTTTTTTACTTTTTAA
JMFS065C05+ ACTTTTTAA
                      ____________________________________________________________
consensus CTCTCAAACACTAACAAACAAATTCACTTCTAC-TTTTTTTTTTTTTTTTTACTTTTTAA
 
. : . : . : . : . : . :
JMFN010O06+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFS053E11+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFS015D08+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFS003F05+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF041B06+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF033B17+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMSF043A15+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF017P20+ TTCCCTCTCCTNTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF009O22+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF005F14+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF012A06+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF015I15+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF007M08+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMFF014G04+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMSF018N19+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMSF033J19+ TTCCCTCTCCTCTGATATTTTTATTGGCAGAAGAGAATGCAAGCTACCACCGACGGTTAG
JMSF017P15+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
JMSF025G04+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
rJMSF018N19- GGTTAG
JMFS065C05+ TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
                      ____________________________________________________________
consensus TTCCCTCTCCTCTGATATTTTTATTGGCAGCAGAGAATGCAAGCTACCACCGACGGTTAG
 
. : . : . : . : . : . :
JMFN010O06+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFS053E11+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFS015D08+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFS003F05+ GTTATGGAAGCAGGAACCCAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF041B06+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF033B17+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMSF043A15+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF017P20+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGGTTTTTTTTTAGATAGATG
JMFF009O22+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF005F14+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF012A06+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF015I15+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF007M08+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFF014G04+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMSF018N19+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMSF033J19+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMSF017P15+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMSF025G04+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
rJMSF018N19- GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
JMFS065C05+ GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
                      ____________________________________________________________
consensus GTTATGGAAGCAGGAAGCGAGCGCAGGCGGAGATTTTTTGGG-TTTTTTTTAGATAGATG
 
. : . : . : . : . : . :
JMFN010O06+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFS053E11+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFS015D08+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFS003F05+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF041B06+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF033B17+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMSF043A15+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF017P20+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF009O22+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF005F14+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF012A06+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF015I15+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF007M08+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMFF014G04+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMSF018N19+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMSF033J19+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMSF017P15+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
JMSF025G04+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
rJMSF018N19- TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATANAA
JMFS065C05+ TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
                      ____________________________________________________________
consensus TAATAAGAGAGGAGAGGGAAGGGTAAAACGGGGATAGAAATCGTCGGAGATCCGATAGAA
 
. : . : . : . : . : . :
JMFN010O06+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAA
JMFS053E11+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAA
JMFS015D08+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAA
JMFS003F05+ AGAGGGCTGGGAATGAAGAATAATA-TT
JMFF041B06+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACC
JMFF033B17+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACC
JMSF043A15+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACC
JMFF017P20+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF009O22+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF005F14+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF012A06+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF015I15+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF007M08+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMFF014G04+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACC
JMSF018N19+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCA
JMSF033J19+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACC
JMSF017P15+ AGAGGGCTGGGAATGAAGAATAATATTTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
JMSF025G04+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
rJMSF018N19- AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCA
JMFS065C05+ AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
                      ____________________________________________________________
consensus AGAGGGCTGGGAATGAAGAATAATA-TTTTTTGGGGGGAGCGCAGGGAAAACTGCACCGC
 
. : . : . : . : . : . :
JMFS065C05+ GAACCGGCGAGCTGGACACTGTGAGGTTTATATACTGACCCCAGGTACGGCGGCTATTCT
                      ____________________________________________________________
consensus GAACCGGCGAGCTGGACACTGTGAGGTTTATATACTGACCCCAGGTACGGCGGCTATTCT
 
. : . : . : . : . : . :
JMFS065C05+ AGAAACCCTAGTTAGCAACGGAGATGACACCTCCGCCGTTTGATCGTAAGATCAAGACCT
                      ____________________________________________________________
consensus AGAAACCCTAGTTAGCAACGGAGATGACACCTCCGCCGTTTGATCGTAAGATCAAGACCT
 
. : . : . : . : . : . :
JMFS065C05+ TTTGACCCGCATTAAACTTCGTTTTCCAGAACTTGACACGTTACGGGTATGATCAAATCC
                      ____________________________________________________________
consensus TTTGACCCGCATTAAACTTCGTTTTCCAGAACTTGACACGTTACGGGTATGATCAAATCC