Contig 000436:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS042B03+                                                              TAGCCTTTT
JMFS063B10+                                                          AGCTTAGCCTTTT
                      ____________________________________________________________
consensus                                                            AGCTTAGCCTTTT
 
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JMFS042B03+           CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
JMFS063B10+           CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
                      ____________________________________________________________
consensus             CCACATTGACATTAGGTGCCATTGTGGCTTCTAAGACAACCCTGGCTTCTAAGATTGCCC
 
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JMFS042B03+           TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
JMFS063B10+           TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
                      ____________________________________________________________
consensus             TATTTGCAGTCTCATAATGACCAGCAGAGCGACAAAGCTTTGCATATTGTATCCAACAAT
 
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JMFS042B03+           TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
JMFS063B10+           TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
                      ____________________________________________________________
consensus             TCCCAACTGAAGCCCTGACACCACTAGCACAAAAAACAAGCCTCCGGAAAGCCAAAAGTG
 
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JMFS042B03+           GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
JMFS063B10+           GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
                      ____________________________________________________________
consensus             GCTCCCTTGCCCAGAGAGATGGTTGAGTGAGTTTGAGTCGGTTTTCCCAGTTTTCCGTTA
 
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JMFS042B03+           GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
JMFS063B10+           GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
                      ____________________________________________________________
consensus             GTTTTGGGAACTGTAGTTCATCAAGATGTAATGATTTTTCCAAAAAAAGATTCACCTCCA
 
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JMFS042B03+           AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
JMFS063B10+           AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
                      ____________________________________________________________
consensus             AGAAGAAAGTTGAATTCCTCCAACTCCCGTAGCATGTGAAGCTTTACAACAAATGGGTAA
 
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JMFS042B03+           GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
JMFS063B10+           GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
                      ____________________________________________________________
consensus             GCCCGTGCATAAGAATCCATGCCAGCAGCAGCCAAAGGGCCAATCAAAGCTTGCTTGGAC
 
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JMFS042B03+           AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
JMFS063B10+           AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
                      ____________________________________________________________
consensus             AATGCAATTTTCTCATCAACAGAGAATTGATCTTTCTTCATCATCGCTTGAAGAATCTTT
 
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JMFS042B03+           GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
JMFS063B10+           GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
                      ____________________________________________________________
consensus             GCAACATCCATGTCAAATGAAGCATTACTCTCAGCGCTGCTGCAAATTAAACCTTCTTTA
 
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JMFS042B03+           TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA
JMFS063B10+           TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA
                      ____________________________________________________________
consensus             TCAGCCCCGTTGAGGTACTCATCCATCAAGTCCCATCTGCCAAGTCTCCATGCAGCCTGA