Contig 000433:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015G01Sequence601000433 (3)ref|XP_009769607.1|253PREDICTED: uncharacterized protein LOC104220433 [Nicotiana sylvestris]
JMFS052F02Sequence608000433 (3)ref|XP_009769607.1|257PREDICTED: uncharacterized protein LOC104220433 [Nicotiana sylvestris]
JMFS061C04Sequence640000433 (3)ref|XP_009769607.1|272PREDICTED: uncharacterized protein LOC104220433 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS052F02+                                                                  CGGAC
JMFS015G01+                                                                  CGGAC
JMFS061C04+                               TTCCACGATGTCCGGCAACTGTTTGAGGATGGCGACGGAC
                      ____________________________________________________________
consensus                                 TTCCACGATGTCCGGCAACTGTTTGAGGATGGCGACGGAC
 
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JMFS052F02+           TTGGCCAGGGGATGGGAGGCGAAGAGCTGCGCCACCAGCCAGAATTCGCCGTAGGTGACG
JMFS015G01+           TTGGCCAGGGGATGGGAGGCGAAGAGCTGCGCCACCAGCCAGAATTCGCCGTAGGTGACG
JMFS061C04+           TTGGCCAGGGGATGGAAGGCGAAGAGCTGCGCCACCAGCCAGAATTCGCCGTAGGTGACG
                      ____________________________________________________________
consensus             TTGGCCAGGGGATGGGAGGCGAAGAGCTGCGCCACCAGCCAGAATTCGCCGTAGGTGACG
 
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JMFS052F02+           GCGAACGCAGCCAGGGATAACACCACCTTTGCGTCCCATTGGTAGTTGGACAGCATGTTC
JMFS015G01+           GCGAACGCAGCCAGGGATAACACCACCTTTGCGTCCCATTGGTAGTTGGACAGCATGTTC
JMFS061C04+           GCGAACGCAGCCAGGGATAACACCACCTTTGCGTCCCATTGGTAGTTGGACAGCATGTTC
                      ____________________________________________________________
consensus             GCGAACGCAGCCAGGGATAACACCACCTTTGCGTCCCATTGGTAGTTGGACAGCATGTTC
 
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JMFS052F02+           AGGATTGCCATTGTTGTTGAGTTGCTGTCACCTCCACCTGAGCACTTGCATGTCAACTCG
JMFS015G01+           AGGATTGCCATTGTTGTTGAGTTGCTGTCACCTCCACCTGAGCACTTGCATGTCAACTCG
JMFS061C04+           AGGATTGCCATTGTTGTTGAGTTGCTGTCACCTCCACCTGAGCACTTGCATGTCAACTCG
                      ____________________________________________________________
consensus             AGGATTGCCATTGTTGTTGAGTTGCTGTCACCTCCACCTGAGCACTTGCATGTCAACTCG
 
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JMFS052F02+           CAGGAGACTTTGTGGGTGATATATGCCAATCCTTCAAGAACCCCATCAACAGCAAGTGAA
JMFS015G01+           CAGGAGACTTTGTGGGTGATATATGCCAATCCTTCAAGAACCCCATCAACAGCAAGTGAA
JMFS061C04+           CAGGAGACTTTGTGGGTGATATATGCCAATCCTTCAAGAACCCCATCAACAGCAAGTGAA
                      ____________________________________________________________
consensus             CAGGAGACTTTGTGGGTGATATATGCCAATCCTTCAAGAACCCCATCAACAGCAAGTGAA
 
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JMFS052F02+           GCTTTCTCTTGTAATTTCTCAATGTTAGCTACTGGCTGAGCGCCTGGAATAGTAGCCCCC
JMFS015G01+           GCTTTCTCTTGTAATTTCTCAATGTTAGCTACTGGCTGAGCGCCTGGAATAGTAGCCCCC
JMFS061C04+           GCTTTCTCTTGTAATTTCTCAATGTTAGCTACTGGCTGAGCGCCTGGAATAGTAGCCCCC
                      ____________________________________________________________
consensus             GCTTTCTCTTGTAATTTCTCAATGTTAGCTACTGGCTGAGCGCCTGGAATAGTAGCCCCC
 
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JMFS052F02+           TGAGTGTCCTGCAGAACGCCCTCAACGCCAGGGTAGGCGTGTTGGAAGATCTCCTCAATG
JMFS015G01+           TGAGTGTCCTGCAGAACGCCCTCAACGCCAGGGTAGGCCTGTTGGAAGATCTCCTCAATG
JMFS061C04+           TGAGTGTCCTGCAGAACGCCCTCAACGCCAGGGTAGGCGTGTTGGAAGATCTCCTCAATG
                      ____________________________________________________________
consensus             TGAGTGTCCTGCAGAACGCCCTCAACGCCAGGGTAGGCGTGTTGGAAGATCTCCTCAATG
 
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JMFS052F02+           ATATGGAGAATGATGTTGGCGTCGACATCGCGGCCGTCAGGGCTATGGGTGTCCTGGATT
JMFS015G01+           ATATGGAGAATGATGTTGGCGTCGACATCGCGGCCGTCAGGGCTATGGGTGTCCTGGATT
JMFS061C04+           ATATGGAGAATGATGTTGGCGTCGACATCGCGGCCGTCAGGGCTATGGGTGTCCTGGATT
                      ____________________________________________________________
consensus             ATATGGAGAATGATGTTGGCGTCGACATCGCGGCCGTCAGGGCTATGGGTGTCCTGGATT
 
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JMFS052F02+           TTCTTAACCATGGCGTGGTCATCTGAGAGAGAGAACAGCGGCGGTGGCCGCCTAGCCAAG
JMFS015G01+           TTCTTAACCATGGCGTGGTCATCTGAGAGAGAGAACAGCGGCGGTGGCCGCCTAGCCAAG
JMFS061C04+           TTCTTAACCATGGCGTGGTCATCTGAGAGAGAGAACAGCGGCGGTGGCCGCCTAGCCAAG
                      ____________________________________________________________
consensus             TTCTTAACCATGGCGTGGTCATCTGAGAGAGAGAACAGCGGCGGTGGCCGCCTAGCCAAG
 
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JMFS052F02+           GGCTGAACCCTAGGCTGCGCTGCCGGAACAAGTGCATGGCTGGCTGCTATCCTTTCCATT
JMFS015G01+           GGCTGAACCCTAGGCTGCGCTGCCGGAACAAGTGCATGGCTGGCTGCTATCCTTTCCATT
JMFS061C04+           GGCTGAACCCTAGGCTGCGCTGCCGGAACAAGTGCATGGCTGGCTGCTATCCTTTCCATT
                      ____________________________________________________________
consensus             GGCTGAACCCTAGGCTGCGCTGCCGGAACAAGTGCATGGCTGGCTGCTATCCTTTCCATT
 
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JMFS052F02+           TCGGAATTCTTCNTGTCTTTTCTTTGATTATGAAAAGGTGGTTTCCACGGACAAAA    
JMFS015G01+           TCGGAATTCTTCTTGTCTTTTCTTTGATTATGAAAAGGTGGTTTCCACGGACAAAA    
JMFS061C04+           TCGGAATTCTTCTTGTCTTTTCTTTGATTATGAAAAGGTGGTTTCCACGGACAAAATGGG
                      ____________________________________________________________
consensus             TCGGAATTCTTCTTGTCTTTTCTTTGATTATGAAAAGGTGGTTTCCACGGACAAAATGGG