Contig 000430:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS058E10Sequence627000430 (2)gb|KDO41066.1|8e-148hypothetical protein CISIN_1g0010543mg, partial [Citrus sinensis] gb|KDO41067.1|
JMFS125H01Sequence552000430 (2)gb|KDO41066.1|4e-128hypothetical protein CISIN_1g0010543mg, partial [Citrus sinensis] gb|KDO41067.1|

Alignment

This contig is upended


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JMFS058E10+                                            AGTTGGTCCACAGCCACATTACTGGGA
                      ____________________________________________________________
consensus                                              AGTTGGTCCACAGCCACATTACTGGGA
 
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JMFS125H01+               AGACCAAAACCTGGCCCTGGCCCTGTTTGGCCATATGATACACAATGGCAGCAGAT
JMFS058E10+           GCACAGACCAAAACCTGGCCCTGGCCCTGTTTGGCCATATGATACACAATGGCAGCAGAT
                      ____________________________________________________________
consensus             GCACAGACCAAAACCTGGCCCTGGCCCTGTTTGGCCATATGATACACAATGGCAGCAGAT
 
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JMFS125H01+           GTGACAGTCTTTCCAGTGCCAGGGGGACCTTGAATCAGACTAATGGGCTTTTGAAGCACA
JMFS058E10+           GTGACAGTCTTTCCAGTGCCAGGGGGACCTTGAATCAGACTAATGGGCTTTTGAAGCACA
                      ____________________________________________________________
consensus             GTGACAGTCTTTCCAGTGCCAGGGGGACCTTGAATCAGACTAATGGGCTTTTGAAGCACA
 
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JMFS125H01+           CTTTTTACAGCAAAAACTTGAGATGCATTGAGCTCAGGAAGACCAGGAGCACCAAAGCGG
JMFS058E10+           CTTTTTACAGCAAAAACTTGAGATGCATTGAGCTCAGGAAGACCAGGAGCACCAAAGCGG
                      ____________________________________________________________
consensus             CTTTTTACAGCAAAAACTTGAGATGCATTGAGCTCAGGAAGACCAGGAGCACCAAAGCGG
 
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JMFS125H01+           CGGGGCAGTGTATTACGGACCAGCTGCATCTCAACTTCATGACCTAACAAGTGGTGATAA
JMFS058E10+           CGGGGCAGTGTATTACGGACCAGCTGCATCTCAACTTCATGACCTAACAAGTGGTGATAA
                      ____________________________________________________________
consensus             CGGGGCAGTGTATTACGGACCAGCTGCATCTCAACTTCATGACCTAACAAGTGGTGATAA
 
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JMFS125H01+           ATGTACCCACTCACACTTGTCTCATCCACGGCAAAACTTTTCATTGCACTTTGCATCCGG
JMFS058E10+           ATGTACCCACTCACACTTGTCTCATCCACGGCAAAACTTTTCATTGCACTTTGCATCCGG
                      ____________________________________________________________
consensus             ATGTACCCACTCACACTTGTCTCATCCACGGCAAAACTTTTCATTGCACTTTGCATCCGG
 
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JMFS125H01+           TCAAAGCTGGTACTCTTCCAGACAAAGTCAACACTAAACCCATGGTTAACATCAACAGGA
JMFS058E10+           TCAAAGCTGGTACTCTTCCAGACAAAGTCAACACTAAACCCATGGTTAACATCAACAGGA
                      ____________________________________________________________
consensus             TCAAAGCTGGTACTCTTCCAGACAAAGTCAACACTAAACCCATGGTTAACATCAACAGGA
 
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JMFS125H01+           ACACCCTGACTAGCACGAAGTTCAAGTGCAACCTCCTCTTGTGCAGTTAGTTTTATCACA
JMFS058E10+           ACACCCTGACTAGCACGAAGTTCAAGTGCAACCTCCTCTTGTGCAGTTAGTTTTATCACA
                      ____________________________________________________________
consensus             ACACCCTGACTAGCACGAAGTTCAAGTGCAACCTCCTCTTGTGCAGTTAGTTTTATCACA
 
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JMFS125H01+           TGCCCTACTGACTGCCAAGCTGGATGAGCTGCATCTCCTGAATAACGTAACCGCAACTCA
JMFS058E10+           TGCCCTACTGACTGCCAAGCTGGATGAGCTGCATCTCCTGAATAACGTAACCGCAACTCA
                      ____________________________________________________________
consensus             TGCCCTACTGACTGCCAAGCTGGATGAGCTGCATCTCCTGAATAACGTAACCGCAACTCA
 
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JMFS125H01+           TCACCAGGTACAAGGCGCAACTCGTTATCTTCCTTAGGAAAAACAAAATATGCAATGCGC
JMFS058E10+           TCACCAGGTACAAGGCGCAACTCGTTATCTTCCTTAGGAAAAACAAAATATGCAATGCGC
                      ____________________________________________________________
consensus             TCACCAGGTACAAGGCGCAACTCGTTATCTTCCTTAGGAAAAACAAAATATGCAATGCGC
 
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JMFS125H01+           TTCTTGTTTAGACCGA                                            
JMFS058E10+           TTCTTGTTTAGACCGACATCCCAGCGAACAGTCAAATTGTCTTTACTCTGGGACTCTTTC
                      ____________________________________________________________
consensus             TTCTTGTTTAGACCGACATCCCAGCGAACAGTCAAATTGTCTTTACTCTGGGACTCTTTC