Contig 000418:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS160G09+                                         ACCGGGGGATATTGAGGGAGAACCTAACAA
                      ____________________________________________________________
consensus                                           ACCGGGGGATATTGAGGGAGAACCTAACAA
 
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JMFS160G09+           AGATTCGAGGTTCAACGCAACAGACACCTGTGATTCTGTACTCCCCGATAGCCTTGGACT
                      ____________________________________________________________
consensus             AGATTCGAGGTTCAACGCAACAGACACCTGTGATTCTGTACTCCCCGATAGCCTTGGACT
 
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JMFS160G09+           AGTGATGCCTGCAACTCGAGAGGCAATCGAAGGTATTGGCTCGATAACTGGGACACCTTC
                      ____________________________________________________________
consensus             AGTGATGCCTGCAACTCGAGAGGCAATCGAAGGTATTGGCTCGATAACTGGGACACCTTC
 
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JMFS160G09+           GTGGCTCGTTGATCTTCTAGATTCAGAAGAGGGCCGTGCTAGAGATGCTGTTGGAATCGC
JMFS054F11+                                        AGGGCCGTGCTAGAGATGCTGTTGGAATCGC
                      ____________________________________________________________
consensus             GTGGCTCGTTGATCTTCTAGATTCAGAAGAGGGCCGTGCTAGAGATGCTGTTGGAATCGC
 
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JMFS160G09+           ACTAGAATTTACGTCAATGGGCTCTACACACGGAACCTCATACGAGACTGGGGGACCATT
JMFS054F11+           ACTAGAATTTACGTCAATGGGCTCTACACACGGAACCTCATACGAGACTGGGGGACCATT
                      ____________________________________________________________
consensus             ACTAGAATTTACGTCAATGGGCTCTACACACGGAACCTCATACGAGACTGGGGGACCATT
 
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JMFS160G09+           ATACTCGAGAGCTATTGAGTAATCGAGATTAGTCTCCCCTTCGGGAAGGGGAGCCCCCGG
JMFS054F11+           ATACTCGAGAGCTATTGAGTAATCGAGATTAGTCTCCCCTTCGGGAAGGGGAGCCCCCGG
                      ____________________________________________________________
consensus             ATACTCGAGAGCTATTGAGTAATCGAGATTAGTCTCCCCTTCGGGAAGGGGAGCCCCCGG
 
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JMFS160G09+           TGGAAGCATCTTCCTCACTATATCCCTCCAATCCTCATCCTTATTTTGCTCCATTGTTTC
JMFS054F11+           TGGAAGCATCTTCCTCACTATATCCCTCCAATCCTCATCCTTATTTTGCTCCATTGTTTC
                      ____________________________________________________________
consensus             TGGAAGCATCTTCCTCACTATATCCCTCCAATCCTCATCCTTATTTTGCTCCATTGTTTC
 
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JMFS160G09+           TCACCCGAAAACTTGATCAACCTTTGCTCACACTACCCTTAGTTTCACAATCAATCACTT
JMFS054F11+           TCACCCGAAAACTTGATCAACCTTTGCTCACACTACCCTTAGTTTCACAATCAATCACTT
JMFS017H04+                                     CTCACACTACCCTTAGTTTCACAATCAATCACTT
                      ____________________________________________________________
consensus             TCACCCGAAAACTTGATCAACCTTTGCTCACACTACCCTTAGTTTCACAATCAATCACTT
 
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JMFS160G09+           CTAAACGCTATTGCTCTCCACATTCATCATACGAAAAGAAATCAACCACTATCAAACACC
JMFS054F11+           CTAAACGCTATTGCTCTCCACATTCATCATACGAAAAGAAATCAACCACTATCAAACACC
JMFS017H04+           CTAAACGCTATTGCTCTCCACATTCATCATACGAAAAGAAATCAACCACTATCAAACACC
                      ____________________________________________________________
consensus             CTAAACGCTATTGCTCTCCACATTCATCATACGAAAAGAAATCAACCACTATCAAACACC
 
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JMFS160G09+           CAAATCGCGTGCTT                                              
JMFS054F11+           CAAATCGCGTGCTTGAAAATCAAAGCTGCCAAGTCTACTAGTCAAGCTAGAATCAACCCC
JMFS017H04+           CAAATCGCGTGCTTGAAAATCAAAGCTGCCAAGTCTACTAGTCAAGCTAGAATCAACCCC
JMFS047B09+                                               ACTAGTCAAGCTAGAATCANCNCC
                      ____________________________________________________________
consensus             CAAATCGCGTGCTTGAAAATCAAAGCTGCCAAGTCTACTAGTCAAGCTAGAATCAACCCC
 
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JMFS054F11+           GAGTACCACCACACCAGATCCTCCCAGATGATCTGTCGAGCCGGGGCGTGGGGCCCTTGA
JMFS017H04+           GAGTACCACCACACCAGATCCTCCCAGATGATCTGTCGAGCCGGGGCGTGGGGCCCTTGA
JMFS047B09+           GAGTACCACCACACCAGATCCTCCCAGATGATCTGTCGAGCCGGGGCGTGGGGCCCTTGA
                      ____________________________________________________________
consensus             GAGTACCACCACACCAGATCCTCCCAGATGATCTGTCGAGCCGGGGCGTGGGGCCCTTGA
 
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JMFS054F11+           GGTTGGGGATTCATCCTTTTGGGAACAACAACAATGTCCATGAATTCAAGTCATACTGAT
JMFS017H04+           GGTTGGGGATTCATCCTTTTGGGAACAACAACAATGTCCATGAATTCAAGTCATACTGAT
JMFS047B09+           GGTTGGGGATTCATCCTTTTGGGAACAACAACAATGTCCATGAATTCAAGTCATACTGAT
                      ____________________________________________________________
consensus             GGTTGGGGATTCATCCTTTTGGGAACAACAACAATGTCCATGAATTCAAGTCATACTGAT
 
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JMFS054F11+           CAGCCTACTGA                                                 
JMFS017H04+           CAGCCTACTGAACCAAGAAAAGTTACCTCCACCAAAGTCAAAACCCAAAGGTTTCAAATA
JMFS047B09+           CAGCCTACTGAACCAAGAAAAGTTACCTCCACCAAAGTCAAAACCCAAAGGTTTCAAATA
                      ____________________________________________________________
consensus             CAGCCTACTGAACCAAGAAAAGTTACCTCCACCAAAGTCAAAACCCAAAGGTTTCAAATA
 
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JMFS017H04+           CTAATGAACCAATAACTCTTGAAATTCCACAAAATTCAATAGTCCAAGATACCACCATTT
JMFS047B09+           CTAATGAACCAATAACTCTTGAAATTCCACAAAATTCAATAGTCCAAGATACCACCATTT
                      ____________________________________________________________
consensus             CTAATGAACCAATAACTCTTGAAATTCCACAAAATTCAATAGTCCAAGATACCACCATTT
 
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JMFS017H04+           TCAACTTCAACTAAACAAACACAAAAAAGACTCATCCACCAACTACAAAAGGACAAACAA
JMFS047B09+           TCAACTTCAACTAAACAAACACAAAAAAGACTCATCCACCAACTACAAAAGGACAAACAA
                      ____________________________________________________________
consensus             TCAACTTCAACTAAACAAACACAAAAAAGACTCATCCACCAACTACAAAAGGACAAACAA
 
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JMFS017H04+           AAACATTTCAATAACATCCAAGAAACAATACTTGACTACAAATGGGAATCAACACCTCTG
JMFS047B09+           AAACATTTCAATAACATCCAAGAAACAATACTTGACTACAAATGGGAATCAACACCTCTG
                      ____________________________________________________________
consensus             AAACATTTCAATAACATCCAAGAAACAATACTTGACTACAAATGGGAATCAACACCTCTG
 
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JMFS017H04+           AAATTCAAAACTAAAACAAGAAAATCCCAACCCTAACAAGCTAGAGACAGTTCAACCTTC
JMFS047B09+           AAATTCAAAACTAAACCAAGAAAATCCCAACCCTAACAAGCTAGAGACAGTTCAACCTTC
                      ____________________________________________________________
consensus             AAATTCAAAACTAAACCAAGAAAATCCCAACCCTAACAAGCTAGAGACAGTTCAACCTTC
 
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JMFS017H04+           AACTACCATATCCACATCAAGCGTAAGAATAAGATAATCTAAA                 
JMFS047B09+           AACTACCATATCCACATCAAGCGTAAGAATAAGATAATCTAAAGAAATGGGTATGCAATT
                      ____________________________________________________________
consensus             AACTACCATATCCACATCAAGCGTAAGAATAAGATAATCTAAAGAAATGGGTATGCAATT
 
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JMFS047B09+           TCAAAAAGAGTTTTCAATAACAGTAAAAGTGGGAACTTTTGCATCTTGGTAGATGGTACA
                      ____________________________________________________________
consensus             TCAAAAAGAGTTTTCAATAACAGTAAAAGTGGGAACTTTTGCATCTTGGTAGATGGTACA
 
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JMFS047B09+           AAAAAGGTATGAGTTGAAATTTTTTACCTGATAAAATGACAAGGAGTATCCGAAGCTGAG
                      ____________________________________________________________
consensus             AAAAAGGTATGAGTTGAAATTTTTTACCTGATAAAATGACAAGGAGTATCCGAAGCTGAG
 
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JMFS047B09+           GTGAGCTGGTGGGTGCTAGTAAAAGTCTGGTGTTTTGAGGAATCTACCTGCCTGCAGCCC
                      ____________________________________________________________
consensus             GTGAGCTGGTGGGTGCTAGTAAAAGTCTGGTGTTTTGAGGAATCTACCTGCCTGCAGCCC