Contig 000416:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032B14+                                   CCCACGCACTTTTCTTTAGCCTCCATAGTTTGAGTG
                      ____________________________________________________________
consensus                                     CCCACGCACTTTTCTTTAGCCTCCATAGTTTGAGTG
 
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JMSF032B14+           GTAGTGGCGATGGGCGGAGCCACTAGGCTTGCCGTTTTATACCCACCGCCGCCGCCGTGG
                      ____________________________________________________________
consensus             GTAGTGGCGATGGGCGGAGCCACTAGGCTTGCCGTTTTATACCCACCGCCGCCGCCGTGG
 
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JMSF008H13+                                                              AGAACGGAA
JMSF032B14+           GAGGAGGAGGAAGCGGAGGTGGAAGTGGAGGGGCTAGGACTCCTTGTATCCAGAACGGAA
JMFS043G03+                                                              AGAACGGAA
                      ____________________________________________________________
consensus             GAGGAGGAGGAAGCGGAGGTGGAAGTGGAGGGGCTAGGACTCCTTGTATCCAGAACGGAA
 
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JMSF008H13+           ACCGGTTCACTGCTCGCAAAGCCGCCATTTTTCTTGAACTTGGCCGCATCTGGGGGCACC
JMSF032B14+           ACCGGTTCACTGCTCGCAAAGCCGCCATTTTTCTTGAACTTGGCCGCATCTGGGGGCACC
JMFS043G03+           ACCGGTTCACTGCTCGCANAGCCGCCATTTTTCTTGAACTTGGCCGCATCTGGGGGCACC
                      ____________________________________________________________
consensus             ACCGGTTCACTGCTCGCAAAGCCGCCATTTTTCTTGAACTTGGCCGCATCTGGGGGCACC
 
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JMSF008H13+           AAGGAGGAAGAAATTGCAGACCCAAACCGTGAAACTTCAACGACACTTTTCCCCTGCAAG
JMSF032B14+           AAGGAGGAAGAAATTGCAGACCCAAACCGTGAAACTTCAACGACACTTTTCCCCTGCAAG
JMFS043G03+           AAGGAGGAAGAAATTGCAGACCCAAACCGTGAAACTTCAACGACACTTTTCCCCTGCAAG
                      ____________________________________________________________
consensus             AAGGAGGAAGAAATTGCAGACCCAAACCGTGAAACTTCAACGACACTTTTCCCCTGCAAG
 
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JMSF008H13+           CTATTGCTATTATACTGCATTCCTATCATCTGCAAATGCAAGAAACCTGAGAAAAAACAC
JMSF032B14+           CTATTGCTATTATACTGCATTCCTATCATCTGCAAATGCAAGAAACCTGAGAAAAAACAC
JMFS043G03+           CTATTGCTATTATACTGCATTCCTATCATCTGCAAATGCAAGAAACCTGAGAAAAAACAC
                      ____________________________________________________________
consensus             CTATTGCTATTATACTGCATTCCTATCATCTGCAAATGCAAGAAACCTGAGAAAAAACAC
 
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JMSF008H13+           AAAAAAATCCCCAGAACCCAATACCAAATCTCAAGTTCAATAGAGATCCAGGAGAAACAA
JMSF032B14+           AAAAAAATCCCCAGAACCCAATACCAAATCTCAAGTTCAATAGAGATCCAGGAGAAACAA
JMFS043G03+           AAAAAAATCCCCAGAACCCAATACCAAATCTCAAGTTCAATAGAGATCCAGGAGAAACAA
                      ____________________________________________________________
consensus             AAAAAAATCCCCAGAACCCAATACCAAATCTCAAGTTCAATAGAGATCCAGGAGAAACAA
 
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JMSF008H13+           AACCACAAAATAGAGCTTCTTCAATGGCAGAGAAGACTCAAAGGCTTCAAAGCTATGAAC
JMSF032B14+           AACCACAAAATAGAGCTTCTTCAATGGCAGAGAAGACTCAAAGGCTTCAAAGCTATGAAC
JMFS043G03+           AACCACAAAATAGAGCTTCTTCAATGGCAGAGAAGACTCAAAGGCTTCAAAGCTATGAAC
                      ____________________________________________________________
consensus             AACCACAAAATAGAGCTTCTTCAATGGCAGAGAAGACTCAAAGGCTTCAAAGCTATGAAC
 
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JMSF008H13+           TTTACACTCCGGGCATCTTTCTTTCCCAGTAACTTAGCCATACCACCATTGCAGAAGCTC
JMSF032B14+           TTTACACTCCGGGCATCTTTCTTTCCCAGTAACTTAGCCATACCACCATTGCAGAAGCTC
JMFS043G03+           TTTACACTCCGGGCATCTTTCTTTCCCAGTAACTTAGCCATACCACCATTGCAGAAGCTC
                      ____________________________________________________________
consensus             TTTACACTCCGGGCATCTTTCTTTCCCAGTAACTTAGCCATACCACCATTGCAGAAGCTC
 
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JMSF008H13+           CATTCTCTAGTCTCTACACCATACCTCACCCCCCTTGCACCTTTTTCACAATTTCACCCT
JMSF032B14+           CATTCTCTAGTCTCTACACCATACCTCACCCCCCTTGCACCTTTTTCACAATTTCACCCT
JMFS043G03+           CATTCTCTAGTCTCTACACCATACCTCACCCCCCTTGCACCTTTTTCACAATTTCACCCT
                      ____________________________________________________________
consensus             CATTCTCTAGTCTCTACACCATACCTCACCCCCCTTGCACCTTTTTCACAATTTCACCCT
 
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JMSF008H13+           GCAAATTGTAATCTTTC                                           
JMSF032B14+           GCAAATTGTAATCTTTCACTCTTTTTTTGGGTCTTTCCTGAGTCTATATCACAACTCCCT
JMFS043G03+           GCAAATTGTAATCTTTCACTCTTTTTTTGGGTCTTTCCTGAGTCTATATCACAACTCCCT
                      ____________________________________________________________
consensus             GCAAATTGTAATCTTTCACTCTTTTTTTGGGTCTTTCCTGAGTCTATATCACAACTCCCT
 
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JMSF032B14+           AGGCAAGGTCGCTGGGCT                                          
JMFS043G03+           AGGCAAGGTCGCTGGGCTAGGCTTTCTTTTCTTTGATTTTCTTGGTTTTTATACAGTTCT
                      ____________________________________________________________
consensus             AGGCAAGGTCGCTGGGCTAGGCTTTCTTTTCTTTGATTTTCTTGGTTTTTATACAGTTCT
 
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JMFS043G03+           GGGTTGCCTAGCTCGCTAGTCGCTAGGCTACACCACTTTTTGTGTTACTGTTCTGTGCTG
                      ____________________________________________________________
consensus             GGGTTGCCTAGCTCGCTAGTCGCTAGGCTACACCACTTTTTGTGTTACTGTTCTGTGCTG