Contig 000415:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P12Sequence417006039 (2)796000415 (4)ref|XP_009764318.1|8e-81PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana sylvestris] r
JMFF037H16Sequence505006039 (2)800000415 (4)ref|XP_009764318.1|2e-81PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana sylvestris] r
JMFS043F04Sequence589000415 (4)ref|XP_009625190.1|1e-25PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana tomentosiform
JMFS046G11Sequence532000415 (4)ref|XP_009625190.1|3e-17PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana tomentosiform

Alignment

This contig is upended


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rJMFF012P12+                         TCAGCAAGAGCGAGAGGAAGAGAATCTGCAGGTTGATGGACTGCA
rJMFF037H16+                      GGATCAGCAAGAGCGAGAGGAAGAGAATCTGCAGGTTGATGGACTGCA
                      ____________________________________________________________
consensus                         GGATCAGCAAGAGCGAGAGGAAGAGAATCTGCAGGTTGATGGACTGCA
 
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rJMFF012P12+          AGAAGCTTTCTGCAGATGCATGCATGCACGCAGTTCAGAACGAGAGGCTCCCTCTGCGTG
rJMFF037H16+          AGAAGCTTTCTGCAGATGCATGCATGCACGCAGTTCAGAACGAGAGGCTCCCTCTGCGTG
                      ____________________________________________________________
consensus             AGAAGCTTTCTGCAGATGCATGCATGCACGCAGTTCAGAACGAGAGGCTCCCTCTGCGTG
 
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rJMFF012P12+          TCGTTGTGCAGGTGCTGTTCTTCGAGCAAGTCCGGGCTAATGCATCATCCGGAAGTAGCA
rJMFF037H16+          TCGTTGTGCAGGTGCTGTTCTTCGAGCAAGTCCGGGCTAATGCATCATCCGGAAGTAGCA
                      ____________________________________________________________
consensus             TCGTTGTGCAGGTGCTGTTCTTCGAGCAAGTCCGGGCTAATGCATCATCCGGAAGTAGCA
 
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rJMFF012P12+          CGCCCGACCTGCCAAAAGCCATAAAGGACCTCAACTGTGCCTCCTATGGCAGCTCGAGAT
rJMFF037H16+          CGCCCGACCTGCCAAAAGCCATAAAGGACCTCAACTGTGCCTCCTATGGCAGCTCGAGAT
                      ____________________________________________________________
consensus             CGCCCGACCTGCCAAAAGCCATAAAGGACCTCAACTGTGCCTCCTATGGCAGCTCGAGAT
 
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rJMFF012P12+          CTGCAACGACTACGACCGAGGAAGACTGGGATGGCGTCGCCTCTGCTGACGAGCTCAGAG
rJMFF037H16+          CTGCAACGACTACGACCGAGGAAGACTGGGATGGCGTCGCCTCTGCTGACGAGCTCAGAG
JMFS046G11+                                                                     AG
JMFS043F04+                      ACGACCGAGGAAGACTGGGATGGCGTCGCCTCTGCTGACGAGCTCAGAG
                      ____________________________________________________________
consensus             CTGCAACGACTACGACCGAGGAAGACTGGGATGGCGTCGCCTCTGCTGACGAGCTCAGAG
 
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rJMFF012P12+          CTTTGAAAGGCGAGCTGGCAGCTTTACGGTTGGGAAATGCAGGAATGGCTGATAGAGCCA
rJMFF037H16+          CTTTGAAAGGCGAGCTGGCAGCTTTACGGTTGGGAAATGCAGGAATGGCTGATAGAGCCA
JMFS046G11+           CTTTGAAAGGCGAGCTGGCAGCTTTACGGTTGGGAAATGCAGGAATGGCTGATAGAGCCA
JMFS043F04+           CTTTGAAAGGCGAGCTGGCAGCTTTACGGTTGGGAAATGCAGGAATGGCTGATAGAGCCA
                      ____________________________________________________________
consensus             CTTTGAAAGGCGAGCTGGCAGCTTTACGGTTGGGAAATGCAGGAATGGCTGATAGAGCCA
 
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rJMFF012P12+          ATGGAGATACTACTAAGACTGTCGCCTCCTCCGACAAGGCTGCTGCCATCAGTAAAATGA
rJMFF037H16+          ATGGAGATACTACTAAGACTGTCGCCTCCTCCGACAAGGCTGCTGCCATCAGTAAAATGA
JMFS046G11+           ATGGAGATACTACTAAGACTGTCGCCTCCTCCGACAAGGCTGCTGCCATCAGTAAAATGA
JMFS043F04+           ATGGAGATACTACTAAGACTGTCGCCTCCTCCGACAAGGCTGCTGCCATCAGTAAAATGA
                      ____________________________________________________________
consensus             ATGGAGATACTACTAAGACTGTCGCCTCCTCCGACAAGGCTGCTGCCATCAGTAAAATGA
 
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rJMFF012P12+          AAGGCTTACTTGTTTCGAAGAGGATCTTCTCCAAAATCTGGTCTAGTAAAGGTGGAAATG
rJMFF037H16+          AAGGCTTACTTGTTTCGAAGAGGATCTTCTCCAAAATCTGGTCTAGTAAAGGTGGAAATG
JMFS046G11+           AAGGCTTACTTGTTTCGAAGAGGATCTTCTCCAAAATCTGGTCTAGTAAAGGTGGAAATG
JMFS043F04+           AAGGCTTACTTGTTTCGAAGAGGATCTTCTCCAAAATCTGGTCTAGTAAAGGTGGAAATG
                      ____________________________________________________________
consensus             AAGGCTTACTTGTTTCGAAGAGGATCTTCTCCAAAATCTGGTCTAGTAAAGGTGGAAATG
 
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rJMFF012P12+          GGGAGAACAGTGGCTCTGATTCGTCGGAAAGTCTGGGCTCTACCACCATGGAAGAAGCAA
rJMFF037H16+          GGGAGAACAGTGGCTCTGATTCGTCGGAAAGTCTGGGCTCTACCACCATGGAAGAAGCAA
JMFS046G11+           GGGAGAACAGTGGCTCTGATTCGTCGGAAAGTCTGGGCTCTACCACCATGGAAGAAGCAA
JMFS043F04+           GGGAGAACAGTGGCTCTGATTCGTCGGAAAGTCTGGGCTCTACCACCATGGAAGAAGCAA
                      ____________________________________________________________
consensus             GGGAGAACAGTGGCTCTGATTCGTCGGAAAGTCTGGGCTCTACCACCATGGAAGAAGCAA
 
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rJMFF012P12+          AATCCACCCCTTCAAGGAAGGGCAGATATTCTGTTTCTTAGTTCAATATCTGAAGATGTA
rJMFF037H16+          AATCCACCCCTTCAAGGAAGGGCAGATATTCTGTTTCTTAGTTCAATATCTGAAGATGTA
JMFS046G11+           AATCCACCCCTTCAAGGAAGGGCAGATATTCTGTTTCTTAGTTCAATATCTGAAGATGTA
JMFS043F04+           AATCCACCCCTTCAAGGAAGGGCAGATATTCTGTTTCTTAGTTCAATATCTGAAGATGTA
                      ____________________________________________________________
consensus             AATCCACCCCTTCAAGGAAGGGCAGATATTCTGTTTCTTAGTTCAATATCTGAAGATGTA
 
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rJMFF012P12+          TAGATATCTAAGCTTATAGCCTTATTAGTTCACAGAATGACAGTTCCATTCCAGGTCAAA
rJMFF037H16+          TAGATATCTAAGCTTATAGCCTTATTAGTTCACAGAATGACAGTTCCATTCCAGGTCAAA
JMFS046G11+           TAGATATCTAAGCTTATAGCCTTATTAGTTCACAGAATGACAGTTCCATTCCAGGTCAAA
JMFS043F04+           TAGATATCTAAGCTTATAGCCTTATTAGTTCACAGAATGACAGTTCCATTCCAGGTCAAA
                      ____________________________________________________________
consensus             TAGATATCTAAGCTTATAGCCTTATTAGTTCACAGAATGACAGTTCCATTCCAGGTCAAA
 
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rJMFF012P12+          TCCAAAAGGAATTGCCATTCTCATTTTCACTTAGACATGTTTTCTAGGGCTAGTTTGAGC
rJMFF037H16+          TCCAAAAGGAATTGCCATTCTCATTTTCACTTAGACATGTTTTCTAGGGCTAGTTTGAGC
JMFS046G11+           TCCAAAAGGAATTGCCATTTTCATTTTCACTTAGACATGTTTTTTAGGGCTAGTTTGAGC
JMFS043F04+           TCCAAAAGGAATTGCCATTCTCATTTTCACTTAGACATGTTTTCTAGGGCTAGTTTGAGC
                      ____________________________________________________________
consensus             TCCAAAAGGAATTGCCATTCTCATTTTCACTTAGACATGTTTTCTAGGGCTAGTTTGAGC
 
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rJMFF012P12+          CTAACCATTAGCAATATGGTTTCACAAGGAAGATCACTGTACTTTGGACCCATAATACAA
rJMFF037H16+          CTAACCATTAGCAATATGGTTTCACAAGGAAGATCACTGTACTTTGGACCCATAATACAA
JMFS046G11+           CTAACCATTAGCAATATGGTTTCTCAAGGAAGATCAATGTACTTTGGTCCCATAATACAA
JMFS043F04+           CTAACCATTAGCAATATGGTTTCACAAGGAAGATCACTGTACTTTGGACCCATAATACAA
                      ____________________________________________________________
consensus             CTAACCATTAGCAATATGGTTTCACAAGGAAGATCACTGTACTTTGGACCCATAATACAA
 
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rJMFF012P12+          ATTGCATGAGCCAAAAAACAAT                                      
rJMFF037H16+          ATTGCATGAGCCAAAAAACAAT                                      
JMFS046G11+           ATTGCATGAGCCAAAAAACAATTAAGCGGATTGTTAAAATAAATGCAAGA          
JMFS043F04+           ATTGCATGAGCCAAAAAACAATTAAGCGGATTGTTAATATAATTGCAAGACTAGAAGATT
                      ____________________________________________________________
consensus             ATTGCATGAGCCAAAAAACAATTAAGCGGATTGTTAATATAATTGCAAGACTAGAAGATT