Contig 000414:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF030F13+                                                 CAAAGCACAAAAATCTCTGAAA
                      ____________________________________________________________
consensus                                                   CAAAGCACAAAAATCTCTGAAA
 
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JMSF030F13+           CCATGTCGTTGATCAACTGCCAAGCTTGAGGGTACCCCGTGCTCNTCATCCGGGCGACAA
                      ____________________________________________________________
consensus             CCATGTCGTTGATCAACTGCCAAGCTTGAGGGTACCCCGTGCTCNTCATCCGGGCGACAA
 
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JMSF030F13+           GTTGCAACCCTGCGTCATTCTGAATGTCGCACTCGGCCAAAGTCTGCTCCCACTGGAGCT
JMFS166E08+                                                              ACTGGAGCT
                      ____________________________________________________________
consensus             GTTGCAACCCTGCGTCATTCTGAATGTCGCACTCGGCCAAAGTCTGCTCCCACTGGAGCT
 
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JMSF030F13+           GCTTCCCTCGGTAGATTAGCCGCTGCTCGGTCACCGGAATTCCGGTGCTGTCTTGGATTT
JMFS166E08+           GCTTCCCTCGGTAGATTAGCCGCTGCTCGGTCACCGGAATTCCGGTGCTGTCTTGGATTT
                      ____________________________________________________________
consensus             GCTTCCCTCGGTAGATTAGCCGCTGCTCGGTCACCGGAATTCCGGTGCTGTCTTGGATTT
 
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JMSF030F13+           TCTCGTGGATGGATTTCACTGTGTCGTCAAAGTCGGCGTGTATAACCAAAGTATTTCCGC
JMFS166E08+           TCTCGTGGATGGATTTCACTGTGTCGTCAAAGTCGGCGTGTATAACCAAAGTATTTCCGC
                      ____________________________________________________________
consensus             TCTCGTGGATGGATTTCACTGTGTCGTCAAAGTCGGCGTGTATAACCAAAGTATTTCCGC
 
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JMSF030F13+           CAGACAGCAAACGGACAAAGAACTGAAGCCGACCGAAAACCCTAGTTGACTCCGCATACG
JMFS166E08+           CAGACAGCAAACGGACAAAGAACTGAAGCCGACCGAAAACCCTAGTTGACTCCGCATACG
                      ____________________________________________________________
consensus             CAGACAGCAAACGGACAAAGAACTGAAGCCGACCGAAAACCCTAGTTGACTCCGCATACG
 
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JMSF030F13+           GAGCGGACCCGGGGGACGACGATGTCGAGCAAGCAGCATCAGAGGACGACGATGATCGGC
JMFS166E08+           GAGCGGACCCGGGGGACGACGATGTCGAGCAAGCAGCATCAGAGGACGACGATGATCGGC
JMFS042D08+                                                            CGATAATCGGC
                      ____________________________________________________________
consensus             GAGCGGACCCGGGGGACGACGATGTCGAGCAAGCAGCATCAGAGGACGACGATGATCGGC
 
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JMSF030F13+           AGTCGGAGGCTCCGGATGTGGAGCGGAGGTGGAAATCGGTGGGGGAGGAAGGGAGAGGCT
JMFS166E08+           AGTCGGAGGCTCCGGATGTGGAGCGGAGGTGGAAATCGGTGGGGGAGGAAGGGAGAGGCT
JMFS042D08+           AGTCGGAGGCTCCGGATGTGGAGCGGAGGTGGAAATCGGTGGGGGAGGAAGNNANAGGCT
                      ____________________________________________________________
consensus             AGTCGGAGGCTCCGGATGTGGAGCGGAGGTGGAAATCGGTGGGGGAGGAAGGGAGAGGCT
 
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JMSF030F13+           GGTCTTTTCGCATCCTGACGGGGCAAGAGACTAGATACTCAGATGAAAGGTCGTCCGCAT
JMFS166E08+           GGTCTTTTCGCATCCTGACGGGGCAAGAGACTAGATACTCAGATGAAAGGTCGTCCGCAT
JMFS042D08+           GGTCTTTTCGCATCCTGACGGGGCAAGAGACTAGATACTCAGATGAAAGGTCGTCCGCAT
                      ____________________________________________________________
consensus             GGTCTTTTCGCATCCTGACGGGGCAAGAGACTAGATACTCAGATGAAAGGTCGTCCGCAT
 
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JMSF030F13+           AATCGTCGAGCTTACGCTTGGTGTTGGGGGCGGAGACGGCGGTTGCGTTGCGATGGTTGA
JMFS166E08+           AATCGTCGAGCTTACGCTTGGTGTTGGGGGCGGAGACGGCGGTTGCGTTGCGATGGTTGA
JMFS042D08+           AATCGTCGAGCTTACGCTTGGTGTTGGGGGCGGAGACGGCGGTTGCGTTGCGATGGTTGA
                      ____________________________________________________________
consensus             AATCGTCGAGCTTACGCTTGGTGTTGGGGGCGGAGACGGCGGTTGCGTTGCGATGGTTGA
 
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JMSF030F13+           CGGCGTCGAGGTAAGACGTCATTGGAGGCGTAAGAGAGGAGGTTTAAGGTACACCAGAGT
JMFS166E08+           CGGCGTCGAGGTAAGACGTCATTGGAGGCGTAAGAGAGGAGGTTTAAGGTACACCAGAGT
JMFS042D08+           CGGCGTCGAGGTAAGACGTCATTGGAGGCGTAAGAGAGGAGGTTTAAGGTACACCAGAGT
                      ____________________________________________________________
consensus             CGGCGTCGAGGTAAGACGTCATTGGAGGCGTAAGAGAGGAGGTTTAAGGTACACCAGAGT
 
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JMSF030F13+           CCATGGAGTTGAAGCTCTCACCGCGCAGACGGTCAAATTGCCAAAACCC           
JMFS166E08+           CCATGGAGTTGAAGCTCTCACCGCGCAGACGGTCAAATTGCCAAAACCCTAGCTCTATCT
JMFS042D08+           CCATGGAGTTGAAGCTCTCACCGCGCAGACGGTCAAATTGCCAAAACCCTAGCTCTATCT
                      ____________________________________________________________
consensus             CCATGGAGTTGAAGCTCTCACCGCGCAGACGGTCAAATTGCCAAAACCCTAGCTCTATCT
 
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JMFS166E08+           TCTACCTTCTTCGTCTTCTTTATAGAGTATCAGTGAGAGGTGAGAGCAG           
JMFS042D08+           TCTACCTTCTTCGTCTTCTTTATAGAGTATCAGTGAGAGGTGAGAGCAGAAAAATGTAAA
                      ____________________________________________________________
consensus             TCTACCTTCTTCGTCTTCTTTATAGAGTATCAGTGAGAGGTGAGAGCAGAAAAATGTAAA