Contig 000412:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN017J05+                                         TGATCTGTTTGCCAGTTAACAAAACCAAAT
                      ____________________________________________________________
consensus                                           TGATCTGTTTGCCAGTTAACAAAACCAAAT
 
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JMFN017J05+           TCAAGTACATAGTACGTGGCAACGTACACGCCTAACATTTCTGGTCTCTAGATGTTTCCA
                      ____________________________________________________________
consensus             TCAAGTACATAGTACGTGGCAACGTACACGCCTAACATTTCTGGTCTCTAGATGTTTCCA
 
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JMFN017J05+           CAGTGGTTGTACTAACATTGTAACAATTACGAGATAGCTTAATGCAATCTAGCCAATGGA
JMFN042N11+                   GTACTAACATTGTAACAATTACGAGATAGCTTAATGCAATCTAGCCAATGGA
JMFN034N07+                   GTACTAACATTGTAACAATTACGAGATAGCTTAATGCAATCTAGCCAATGGA
                      ____________________________________________________________
consensus             CAGTGGTTGTACTAACATTGTAACAATTACGAGATAGCTTAATGCAATCTAGCCAATGGA
 
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JMFN017J05+           GGATCTCAAAATTAGGATCTCTCTCGACGATGACGTCAGACACAGTTATCTGTACGGATC
JMFN042N11+           GGATCTCAAAATTAGGATCTCTCTCGACGATGACGTCAGACACAGTTATCTGTACGGATC
JMFN034N07+           GGATCTCAAAATTAGGATCTCTCTCGACGATGACGTCAGACACAGTTATCTGTACGGATC
                      ____________________________________________________________
consensus             GGATCTCAAAATTAGGATCTCTCTCGACGATGACGTCAGACACAGTTATCTGTACGGATC
 
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JMFN017J05+           CGCGGTAGCCGGTGATCTTTCCCCGGACTCTAGCGAGGACGCCGAGTTGAGCTTCGGAGG
JMFN042N11+           CGCGGTAGCCGGTGATCTTTCCCCGGACTCTAGCGAGGACGCCGAGTTGAGCTTCGGAGG
JMFN034N07+           CGCGGTAGCCGGTGATCTTTCCCCGGACTCTAGCGAGGACGCCGAGTTGAGCTTCGGAGG
                      ____________________________________________________________
consensus             CGCGGTAGCCGGTGATCTTTCCCCGGACTCTAGCGAGGACGCCGAGTTGAGCTTCGGAGG
 
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JMFN017J05+           CAAACTTGACAGCCATTTCGGCAATTGCTCGAACATCTGGTGGGCTTCTGCGAGAGAAAT
JMFN042N11+           CAAACTTGACAGCCATTTCGGCAATTGCTCGAACATCTGGTGGGCTTCTGCGAAAGAAAT
JMFN034N07+           CAAACTTGACAGCCATTTCGGCAATTGCTCGAACATCTGGTGGGCTTCTGCGAGAGAAAT
                      ____________________________________________________________
consensus             CAAACTTGACAGCCATTTCGGCAATTGCTCGAACATCTGGTGGGCTTCTGCGAGAGAAAT
 
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JMFN017J05+           ACGGAGAGCTCAACTGGTTGAGCCAAAGCACGCAGGGGATGCAACCAGTGGTGTCATCAA
JMFN042N11+           ACGGAGAGCTCAACTGGTTGAGCCAAAGCACGCAGGGGATGCAACCAGTGGTGTCATCAA
JMFN034N07+           ACGGAGAGCTCAACTGGTTGAGCCAAAGCACGCAGGGGATGCAACCAGTGGTGTCATCAA
                      ____________________________________________________________
consensus             ACGGAGAGCTCAACTGGTTGAGCCAAAGCACGCAGGGGATGCAACCAGTGGTGTCATCAA
 
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JMFN017J05+           TGGAGAATTTCAAAAACCTTCCTAGCTTGAACTCCCGGCTTACGACCACGCCCACAGCCT
JMFN042N11+           TGGAGAATTTCAAAAACCTTCCTGGCTTGAACTCCCGGCTTACGACCACGCCCACAGCCT
JMFN034N07+           TGGAGAATTTCAAAAACCTTCCTGGCTTGAACTCCCGGCTTACGACCACGCCCACAGCCT
                      ____________________________________________________________
consensus             TGGAGAATTTCAAAAACCTTCCTGGCTTGAACTCCCGGCTTACGACCACGCCCACAGCCT
 
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JMFN017J05+           CCGCCCAACAGAGGCGAACGCCATTGCGGGAGAATGAGGTTTGGTCTACAGAATTCGGCA
JMFN042N11+           CCGCCCAACAGAGGCGAACGCCATTGCGGGAGAATGAGGTTTGGTCTACAGAATTCGGCA
JMFN034N07+           CCGCCCAACAGAGGCGAACGCCATTGCGGGAGAATGAGGTTTGGTCTACAGAATTCGGCA
                      ____________________________________________________________
consensus             CCGCCCAACAGAGGCGAACGCCATTGCGGGAGAATGAGGTTTGGTCTACAGAATTCGGCA
 
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JMFN017J05+           CGAGAGTGAGCAGATCAAAGGCTAACAGCTTCACGTGGGTGTTGAATAGGGATGCCGGAG
JMFN042N11+           CGAGAGTGAGCAGATCAAAGGCTAACAGCTTCACGTGGGTGTTGAATAGGGATGCCGGAG
JMFN034N07+           CGAGAGTGAGCAGATCAAAGGCTAACAGCTTCACGTGGGTGTTGAATAGGGATGCCGGAG
                      ____________________________________________________________
consensus             CGAGAGTGAGCAGATCAAAGGCTAACAGCTTCACGTGGGTGTTGAATAGGGATGCCGGAG
 
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JMFN017J05+           CGTCCATCTCTCCATCACCGCCGCAAAATCATGATTCAAACT                  
JMFN042N11+           CGTCCATCTCTCCATCACCGCCGCAAAATCATGATTCAAACTGAGGATATTGTTGGCACC
JMFN034N07+           CGTCCATCTCTCCATCACCGCCGCAAAATCATGATTCAAACTGAGGATATTGTTGGCACC
JMFS040H07+                                            ATTCAAACTGAGGATATTGTTGGCACC
                      ____________________________________________________________
consensus             CGTCCATCTCTCCATCACCGCCGCAAAATCATGATTCAAACTGAGGATATTGTTGGCACC
 
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JMFN042N11+           ATTTTCCAACCAATAAGCGCATTGAACATAAAATTTTGGTTGAAACGTCGCAATATGAC 
JMFN034N07+           ATTTTCCAACCAATAAGCGCATTGAACATAAAATTTTGGTTGAAACGTCGCAATATGACA
JMFS040H07+           ATTTTCCAACCAATAAGCGCATTGAACATAAAATTTTGGTTGAAACGTCGCAATATGACA
                      ____________________________________________________________
consensus             ATTTTCCAACCAATAAGCGCATTGAACATAAAATTTTGGTTGAAACGTCGCAATATGACA
 
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JMFN034N07+           TTATACACAACAAATTTGATCCAGTCTACTCCT                           
JMFS040H07+           TTATACACAACAAATTTGATCCAGTCTACTCCTGAACAGAATTGAAAAACAAACTTCCAA
                      ____________________________________________________________
consensus             TTATACACAACAAATTTGATCCAGTCTACTCCTGAACAGAATTGAAAAACAAACTTCCAA
 
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JMFS040H07+           CAAATTAATTCTAAAAAATCAAATCAGTTATGCAAGCCACGCTCTAACTCCGATATTGTT
                      ____________________________________________________________
consensus             CAAATTAATTCTAAAAAATCAAATCAGTTATGCAAGCCACGCTCTAACTCCGATATTGTT
 
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JMFS040H07+           TAAAAGCTAACATTTAATCCTATTTAGATCCATAAATTTAAGACTTAACACATTAAAATG
                      ____________________________________________________________
consensus             TAAAAGCTAACATTTAATCCTATTTAGATCCATAAATTTAAGACTTAACACATTAAAATG
 
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JMFS040H07+           CAGAATATATGAATGAACATCAATCAAATTCAAGAAATTAATGTTATGCCGATCAATCGA
                      ____________________________________________________________
consensus             CAGAATATATGAATGAACATCAATCAAATTCAAGAAATTAATGTTATGCCGATCAATCGA
 
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JMFS040H07+           TCTTGCCAGAAACTAGGTTAAATATCAACATTTTACACTAAATTAGAAATACTCTGCAGA
                      ____________________________________________________________
consensus             TCTTGCCAGAAACTAGGTTAAATATCAACATTTTACACTAAATTAGAAATACTCTGCAGA
 
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JMFS040H07+           TGAGTTCGAGAAGATGAAATGTGAGTCTAATCCAGGCCCGCTAATCATAAACCCTAGAAG
                      ____________________________________________________________
consensus             TGAGTTCGAGAAGATGAAATGTGAGTCTAATCCAGGCCCGCTAATCATAAACCCTAGAAG
 
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JMFS040H07+           GGCGTCAGAGAGAGCAGACATGACGACTCAAGGATTCAATCTCCGTGCACATTACCATGC
                      ____________________________________________________________
consensus             GGCGTCAGAGAGAGCAGACATGACGACTCAAGGATTCAATCTCCGTGCACATTACCATGC
 
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JMFS040H07+           TTCCTTCATTATATGAATCCAGAGCATCGGCTTATTGTACACGGATCCATTGACAGACTA
                      ____________________________________________________________
consensus             TTCCTTCATTATATGAATCCAGAGCATCGGCTTATTGTACACGGATCCATTGACAGACTA
 
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JMFS040H07+           CTGCAGAGTTAATTTCAACTCATATAACTATCTTCTAAGTAAGATTAAACAAGAAAACTA
                      ____________________________________________________________
consensus             CTGCAGAGTTAATTTCAACTCATATAACTATCTTCTAAGTAAGATTAAACAAGAAAACTA