Contig 000408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS034E04Sequence624000408 (2)emb|CDP07868.1|2e-54unnamed protein product [Coffea canephora]
JMSF046P21Sequence674000408 (2)ref|XP_009615784.1|5e-69PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390667022650ref|XP_006357269.1|8e-73PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-prot

Alignment

This contig is upended


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JMSF046P21+               TGTGGAACCTGGGATCTCAGGGAATTGTTGGCTAGGACAAGTTTAACAATGTTGTT
                      ____________________________________________________________
consensus                 TGTGGAACCTGGGATCTCAGGGAATTGTTGGCTAGGACAAGTTTAACAATGTTGTT
 
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JMSF046P21+           TCCCAAGGAGGGGAAACTTGGTCCTAAGTTGTTGCCACTCAAATCAACCTCTTCGAGCCC
JMFS034E04+                                                         ACCTCTTCGAGCNC
                      ____________________________________________________________
consensus             TCCCAAGGAGGGGAAACTTGGTCCTAAGTTGTTGCCACTCAAATCAACCTCTTCGAGCCC
 
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JMSF046P21+           CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
JMFS034E04+           CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
                      ____________________________________________________________
consensus             CGATACCCCCTTCAGATCCGGGATACTCCCATTCAACAAGTTATGACTCAAAACCAGGCT
 
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JMSF046P21+           TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
JMFS034E04+           TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
                      ____________________________________________________________
consensus             TTTCAGGTTCTTGAACTTGGCTATGGATTGGGGAATGCCGCCACGGATTTGGTTCGAGCT
 
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JMSF046P21+           GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
JMFS034E04+           GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
                      ____________________________________________________________
consensus             GAGGTTTAACGCCTCGAGCCCGCCAAACCTGGTGATCTTAGCCGGCAAAGAACCCCATAA
 
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JMSF046P21+           CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
JMFS034E04+           CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
                      ____________________________________________________________
consensus             CCCGAGATTCACCAATGACAATCTCTTCAAGCTGGAAAGCTTGGTGAGAAGAGTGAAGAA
 
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JMSF046P21+           TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
JMFS034E04+           TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
                      ____________________________________________________________
consensus             TGAATCAAGAGAGAAATTCTGGGAAAGATGGGAGGCTTTGTTTCCAAGAATTGTAAGTTC
 
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JMSF046P21+           TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
JMFS034E04+           TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
                      ____________________________________________________________
consensus             TGTGATGTGATTCCCAGAACAGGTGATCACTAGAGAAGGGGTTTGTGGGAGAAAGCAGAA
 
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JMSF046P21+           ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
JMFS034E04+           ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
                      ____________________________________________________________
consensus             ATTTGTCCAGTTATTCCAGCCTTGAAGAGCTTGGGGGTATTCAAGAAGCTGCTGAACCTG
 
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JMSF046P21+           GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
JMFS034E04+           GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
                      ____________________________________________________________
consensus             GAATAGGATCCTCTTCTCTGAGGATAACAATTGTGCAGAAGAAACTGGGATTAGCAGAAG
 
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JMSF046P21+           CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
JMFS034E04+           CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
                      ____________________________________________________________
consensus             CAGGAACAGGGAACAAACCAAGAAACTGGGCTTCATCTTTTTTCTTGTTTTTGTGAGGAA
 
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JMSF046P21+           TTGAATCTCAAGTTCCC                                           
JMFS034E04+           TTGAATCTCAAGTTCCCATCAATCTACTAGGCTAGAAAGAAAAATATGGAGCTTTTTCAC
                      ____________________________________________________________
consensus             TTGAATCTCAAGTTCCCATCAATCTACTAGGCTAGAAAGAAAAATATGGAGCTTTTTCAC