Contig 000407:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033B12Sequence600000407 (5)ref|XP_007137583.1|2e-122hypothetical protein PHAVU_009G1385000g, partial [Phaseolus vulgaris] gb|ESW0957
JMFS034B07Sequence605000407 (5)ref|XP_007137583.1|1e-123hypothetical protein PHAVU_009G1385000g, partial [Phaseolus vulgaris] gb|ESW0957
JMFS034D04Sequence601000407 (5)ref|XP_007137583.1|2e-123hypothetical protein PHAVU_009G1385000g, partial [Phaseolus vulgaris] gb|ESW0957
JMSF003D23Sequence392004926 (7)ref|XP_009772099.1|5e-05PREDICTED: systemin receptor SR160 [Nicotiana sylvestris]749000407 (5)pdb|4OA2|A9e-102Chain A, Crystal Structure Of The Bri1 Kinase Domain (865-1196) In Complex With
JMSF035J15Sequence104000407 (5)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          ACAACCTCTTTTATGTATAATATTATCAAGATTCTTCTTTTTTTGGTTTTCTTCATGGCA
                      ____________________________________________________________
consensus             ACAACCTCTTTTATGTATAATATTATCAAGATTCTTCTTTTTTTGGTTTTCTTCATGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          CTAATGGTACATACAACATTTTCCAAAAAATACAGTGGCAAATTTTTGATGACATGAGGG
                      ____________________________________________________________
consensus             CTAATGGTACATACAACATTTTCCAAAAAATACAGTGGCAAATTTTTGATGACATGAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035J15-                                              CAAAATTTATCCTTGTGATCTGAT
rJMSF003D23-          GAAAATTTTAGATGGAAGGCAATGGAGAGATGAGAGCAAAATTTATCCTTGTGATCTGAT
                      ____________________________________________________________
consensus             GAAAATTTTAGATGGAAGGCAATGGAGAGATGAGAGCAAAATTTATCCTTGTGATCTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035J15-          CAATGCTCATTGCCTTCTTTTATGCTTTCNTTTATGCTCATGNGTNCCCCTTCTGTANGA
rJMSF003D23-          CAATGCTCATTGCCTTCTTTTATGCTTTCTTTTATGCTCATGTGTACCCCTTCTGTATGA
                      ____________________________________________________________
consensus             CAATGCTCATTGCCTTCTTTTATGCTTTCTTTTATGCTCATGTGTACCCCTTCTGTATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF035J15-          AAGGCANCATCCTCTGCA                                          
rJMSF003D23-          AAAGCAGCATCCTCTGCAGCAATTGTGGATGAGGAATCAATCCCAGAACCTGCTTGAATC
JMFS034B07+           AAAGCAGCATCCTCTGCAGCAATTGTGGATGAGGAATCAATCCCAGAACCTGCTTGAATC
JMFS033B12+           AAAGCAGCATCCTCTGCAGCAATTGTGGATGAGGAATCAATCCCAGAACCTGCTTGAATC
JMFS034D04+           AAAGCAGCATCCTCTGCAGCAATTGTGGATGAGGAATCAATCCCAGAACCTGCTTGAATC
                      ____________________________________________________________
consensus             AAAGCAGCATCCTCTGCAGCAATTGTGGATGAGGAATCAATCCCAGAACCTGCTTGAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          TCCTTGAACATTGCCATGACTTGAATCATTGTGGGGCGTCTGAAAGGCCGATCGTCTAAG
JMFS034B07+           TCCTTGAACATTGCCATGACTTGAATCATTGTGGGGCGTCTGAAAGGCCGATCGTCTAAG
JMFS033B12+           TCCTTGAACATTGCCATGACTTGAATCATTGTGGGGCGTCTGAAAGGCCGATCGTCTAAG
JMFS034D04+           TCCTTGAACATTGCCATGACTTGAATCATTGTGGGGCGTCTGAAAGGCCGATCGTCTAAG
                      ____________________________________________________________
consensus             TCCTTGAACATTGCCATGACTTGAATCATTGTGGGGCGTCTGAAAGGCCGATCGTCTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          CAAGCCACCGATACTTTCAAGTGCTCTAGAAGCTCGAGTTCTAAGCTCGGGTCTTCTTTC
JMFS034B07+           CAAGCCACCGATACTTTCAAGTGCTCTAGAAGCTCGAGTTCTAAGCTCGGGTCTTCTTTC
JMFS033B12+           CAAGCCACCGATACTTTCAAGTGCTCTAGAAGCTCGAGTTCTAAGCTCGGGTCTTCTTTC
JMFS034D04+           CAAGCCACCGATACTTTCAAGTGCTCTAGAAGCTCGAGTTCTAAGCTCGGGTCTTCTTTC
                      ____________________________________________________________
consensus             CAAGCCACCGATACTTTCAAGTGCTCTAGAAGCTCGAGTTCTAAGCTCGGGTCTTCTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          AGTAACTCTGGATCGAACACATCACGAATTCTTATTTTCGCTTGCTGCTTTACCCACCCA
JMFS034B07+           AGTAACTCTGGATCGAACACATCACGAATTCTTATTTTCGCTTGCTGCTTTACCCACCCA
JMFS033B12+           AGTAACTCTGGATCGAACACATCACGAATTCTTATTTTCGCTTGCTGCTTTACCCACCCA
JMFS034D04+           AGTAACTCTGGATCGAACACATCACGAATTCTTATTTTCGCTTGCTGCTTTACCCACCCA
                      ____________________________________________________________
consensus             AGTAACTCTGGATCGAACACATCACGAATTCTTATTTTCGCTTGCTGCTTTACCCACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          ACGAGATTGTTGTCGCCAAAATCTGGGGAGTCTGTTGGCTGTTTGCCAGTGAGCAGCTCG
JMFS034B07+           ACGAGATTGTTGTCGCCAAAATCTGGGGAGTCTGTTGGCTGTTTGCCAGTGAGCAGCTCG
JMFS033B12+           ACGAGATTGTTGTCGCCAAAATCTGGGGAGTCTGTTGGCTGTTTGCCAGTGAGCAGCTCG
JMFS034D04+           ACGAGATTGTTGTCGCCAAAATCTGGGGAGTCTGTTGGCTGTTTGCCAGTGAGCAGCTCG
                      ____________________________________________________________
consensus             ACGAGATTGTTGTCGCCAAAATCTGGGGAGTCTGTTGGCTGTTTGCCAGTGAGCAGCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          AGCAGAACCACACCATAGCTATACACATCTCCTTTGGTTGAACATCTAAAGCTCTGGTAG
JMFS034B07+           AGCAGAACCACACCATAGCTATACACATCTCCTTTGGTTGAACATCTAAAGCTCTGGTAG
JMFS033B12+           AGCAGAACCACACCATAGCTATACACATCTCCTTTGGTTGAACATCTAAAGCTCTGGTAG
JMFS034D04+           AGCAGAACCACACCATAGCTATACACATCTCCTTTGGTTGAACATCTAAAGCTCTGGTAG
                      ____________________________________________________________
consensus             AGCAGAACCACACCATAGCTATACACATCTCCTTTGGTTGAACATCTAAAGCTCTGGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          TACTCAGGAGGGACATATCCGGGAGTGCCTGCTAGGGTGCTCACGCTCAAATGAGTGTCC
JMFS034B07+           TACTCAGGAGGGACATATCCGGGAGTGCCTGCTAGGGTGCTCACGCTCAAATGAGTGTCC
JMFS033B12+           TACTCAGGAGGGACATATCCGGGAGTGCCTGCTAGGGTGCTCACGCTCAAATGAGTGTCC
JMFS034D04+           TACTCAGGAGGGACATATCCGGGAGTGCCTGCTAGGGTGCTCACGCTCAAATGAGTGTCC
                      ____________________________________________________________
consensus             TACTCAGGAGGGACATATCCGGGAGTGCCTGCTAGGGTGCTCACGCTCAAATGAGTGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          ACAGTGTTCATTAGCCTTGCCATCCCGAAATCAGAAACTCTAGCTTCCAAGTTTTCGTCC
JMFS034B07+           ACAGTGTTCATTAGCCTTGCCATCCCGAAATCAGAAACTCTAGCTTCCAAGTTTTCGTCC
JMFS033B12+           ACAGTGTTCATTAGCCTTGCCATCCCGAAATCAGAAACTCTAGCTTCCAAGTTTTCGTCC
JMFS034D04+           ACAGTGTTCATTAGCCTTGCCATCCCGAAATCAGAAACTCTAGCTTCCAAGTTTTCGTCC
                      ____________________________________________________________
consensus             ACAGTGTTCATTAGCCTTGCCATCCCGAAATCAGAAACTCTAGCTTCCAAGTTTTCGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003D23-          AGCAACACATTGCTGGATT                                         
JMFS034B07+           AGCAACACATTGCTGGATTTCATGTCCCTGTGGATAATGTGTGGAGTGCAGTTGTGGTGA
JMFS033B12+           AGCAACACATTGCTGGATTTCATGTCCCTGTGGATAATGTGTGGAGTGCAGTTGTGGTGA
JMFS034D04+           AGCAACACATTGCTGGATTTCATGTCCCTGTGGATAATGTGTGGAGTGCAGTTGTGGTGA
                      ____________________________________________________________
consensus             AGCAACACATTGCTGGATTTCATGTCCCTGTGGATAATGTGTGGAGTGCAGTTGTGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034B07+           AGGAAGGCCAATCCCCTTGCAGCTCCTATCGCAACTTTCCTTCTTGCACCGAACTAGTTC
JMFS033B12+           AGGAAGGCCAATCCCCTTGCAGCTCCTATCGCAACTTTCCTTCTTGCACCGAACTAGTTC
JMFS034D04+           AGGAAGGCCAATCCCCTTGCAGCTCCTATCGCAACTTTCCTTCTTGCACCGAACTAGTTC
                      ____________________________________________________________
consensus             AGGAAGGCCAATCCCCTTGCAGCTCCTATCGCAACTTTCCTTCTTGCACCGAACTAGTTC