Contig 000405:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033B08Sequence625000405 (4)ref|XP_009785963.1|3e-48PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri
JMFS062A02Sequence622000405 (4)ref|XP_009785963.1|8e-48PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri
JMFS062A04Sequence633000405 (4)ref|XP_009785963.1|1e-47PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri
JMSF019C17Sequence493000405 (4)ref|XP_009785963.1|2e-30PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri444010072 (2)

Alignment

This contig is upended


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JMSF019C17+           CTGTAGGCACNTCTTNTACATGATTTTTCACTGGAGCAGATGCCGAAGGACCAGAAAGAG
JMFS062A04+                            ACATGATTTTTCACTGGAGCAGATGCCGAAGGACCAGAAAGAG
JMFS062A02+                                              GCAGATGCCGAAGGACCAGAAAGAG
JMFS033B08+                                              GCAGATGCCGAAGGACCAGAAAGAG
                      ____________________________________________________________
consensus             CTGTAGGCACNTCTTNTACATGATTTTTCACTGGAGCAGATGCCGAAGGACCAGAAAGAG
 
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JMSF019C17+           CTGAACCGATTCCAGAGCCAAAGCTACCAAAGCTCAAGTGTGAACAATCTGCACTTTGAA
JMFS062A04+           CTGAACCGATTCCAGAGCCAAAGCTACCAAAGCTCAAGTGTGAACAATCTGCACTTTGAA
JMFS062A02+           CTGAACCGATTCCAGAGCCAAAGCTACCAAAGCTCAAGTGTGAACAATCTGCACTTTGAA
JMFS033B08+           CTGAACCGATTCCAGAGCCAAAGCTACCAAAGCTCAAGTGTGAACAATCTGCACTTTGAA
                      ____________________________________________________________
consensus             CTGAACCGATTCCAGAGCCAAAGCTACCAAAGCTCAAGTGTGAACAATCTGCACTTTGAA
 
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JMSF019C17+           CTTGTAGGTGGTCTGGAATAACCACTGAAGGCCCTTCCTCCTCAGGTGGCACACCTTGAT
JMFS062A04+           CTTGTAGGTGGTCTGGAATAACCACTGAAGGCCCTTCCTCCTCAGGTGGCACACCTTGAT
JMFS062A02+           CTTGTAGGTGGTCTGGAATAACCACTGAAGGCCCTTCCTCCTCAGGTGGCACACCTTGAT
JMFS033B08+           CTTGTAGGTGGTCTGGAATAACCACTGAAGGCCCTTCCTCCTCAGGTGGCACACCTTGAT
                      ____________________________________________________________
consensus             CTTGTAGGTGGTCTGGAATAACCACTGAAGGCCCTTCCTCCTCAGGTGGCACACCTTGAT
 
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JMSF019C17+           CCTGGTGTACAGACAGTTGTTGCAAGTTTTCAGTAGCCGATGAAACTGAAGCATTCACAT
JMFS062A04+           CCTGGTGTACAGACAGTTGTTGCAAGTTTTCAGTAGCCGATGAAACTGAAGCATTCACAT
JMFS062A02+           CCTGGTGTACAGACAGTTGTTGCAAGTTTTCAGTAGCCGATGAAACTGAAGCATTCACAT
JMFS033B08+           CCTGGTGTACAGACAGTTGTTGCAAGTTTTCAGTAGCCGATGAAACTGAAGCATTCACAT
                      ____________________________________________________________
consensus             CCTGGTGTACAGACAGTTGTTGCAAGTTTTCAGTAGCCGATGAAACTGAAGCATTCACAT
 
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JMSF019C17+           CATCAACTGTAAACTCACTTTCCCAGTGCGTGGAAGAATGATCATGATCCTTGTGTCTAT
JMFS062A04+           CATCAACTGTAAACTCACTTTCCCAGTGCGTGGAAGAATGATCATGATCCTTGTGTCTAT
JMFS062A02+           CATCAACTGTAAACTCACTTTCCCAGTGCGTGGAAGAATGATCATGATCCTTGTGTCTAT
JMFS033B08+           CATCAACTGTAAACTCACTTTCCCAGTGCGTGGAAGAATGATCATGATCCTTGTGTCTAT
                      ____________________________________________________________
consensus             CATCAACTGTAAACTCACTTTCCCAGTGCGTGGAAGAATGATCATGATCCTTGTGTCTAT
 
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JMSF019C17+           AAATGTCAATGTCATTTTCATATAGAGATTCACCTCTAGAATCATCCTCCGGAAACTTTC
JMFS062A04+           AAATGTCAATGTCATTTTCATATAGAGATTCACCTCTAGAATCATCCTCCGGAAACTTTC
JMFS062A02+           AAATGTCAATGTCATTTTCATATAGAGATTCACCTCTAGAATCATCCTCCGGAAACTTTC
JMFS033B08+           AAATGTCAATGTCATTTTCATATAGAGATTCACCTCTAGAATCATCCTCCGGAAACTTTC
                      ____________________________________________________________
consensus             AAATGTCAATGTCATTTTCATATAGAGATTCACCTCTAGAATCATCCTCCGGAAACTTTC
 
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JMSF019C17+           TGTTTGGAACGGAACCAGATTGCACATGGCTTGCACCAACACTTAAGCCATGATCTTCTG
JMFS062A04+           TGTTTGGAACGGAACCAGATTGCACATGGCTTGCACCAACACTTAAGCCATGATCTTCTG
JMFS062A02+           TGTTTGGAACGGAACCAGATTGCACATGGCTTGCACCAACACTTAAGCCATGATCTTCTG
JMFS033B08+           TGTTTGGAACGGAACCAGATTGCACATGGCTTGCACCAACACTTAAGCCATGATCTTCTG
                      ____________________________________________________________
consensus             TGTTTGGAACGGAACCAGATTGCACATGGCTTGCACCAACACTTAAGCCATGATCTTCTG
 
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JMSF019C17+           TTCCCTGAACCTCATCCACCTGGAGATGCTGGTTAATTCTATCATAAACTAGGTTAGAAG
JMFS062A04+           TTCCCTGAACCTCATCCACCTGGAGATGCTGGTTAATTCTATCATAAACTAGGTTAGAAG
JMFS062A02+           TTCCCTGAACCTCATCCACCTGGAGATGCTGGTTAATTCTATCATAAACTAGGTTAGAAG
JMFS033B08+           TTCCCTGAACCTCATCCACCTGGAGATGCTGGTTAATTCTATCATAAACTAGGTTAGAAG
                      ____________________________________________________________
consensus             TTCCCTGAACCTCATCCACCTGGAGATGCTGGTTAATTCTATCATAAACTAGGTTAGAAG
 
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JMSF019C17+           AGTCTGGATCTGC                                               
JMFS062A04+           AGTCTGGATCTGCAGAAGGCTCTGAAATAGAAGGGAGAACAGAAGCTGATGGCTGCTCGA
JMFS062A02+           AGTCTGGATCTGCAGAAGGCTCTGAAATAGAAGGGAGAACAGAAGCTGATGGCTGCTCGA
JMFS033B08+           AGTCTGGATCTGCAGAAGGCTCTGAAATAGAAGGGAGAACAGAAGCTGATGGCTGCTCGA
                      ____________________________________________________________
consensus             AGTCTGGATCTGCAGAAGGCTCTGAAATAGAAGGGAGAACAGAAGCTGATGGCTGCTCGA
 
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JMFS062A04+           TTAAAGGCCATTCATCATTACTTGAATCATGTTGTGCAGAGCAAACCCCTTGATCCATGT
JMFS062A02+           TTAAAGGCCATTCATCATTACTTGAATCATGTTGTGCAGAGCAAACCCCTTGATCCATGT
JMFS033B08+           TTAAAGGCCATTCATCATTACTTGAATCATGTTGTGCAGAGCAAACCCCTTGATCCATGT
                      ____________________________________________________________
consensus             TTAAAGGCCATTCATCATTACTTGAATCATGTTGTGCAGAGCAAACCCCTTGATCCATGT
 
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JMFS062A04+           GTACCTCAGAAACTTTAGAAGCCTGATCGTCTGGAAACTGAAAGTTATGA          
JMFS062A02+           GTACCTCAGAAACTTTAGAAGCCTGATCGTCTGGAAACTGAAAGTTATGA          
JMFS033B08+           GTACCTCAGAAACTTTAGAAGCCTGATCGTCTGGAAACTGAAAGTTATGACCTGCAGCCC
                      ____________________________________________________________
consensus             GTACCTCAGAAACTTTAGAAGCCTGATCGTCTGGAAACTGAAAGTTATGACCTGCAGCCC