| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS004G05 | Sequence | 510 | 000402 (7) | ref|XP_011078363.1| | 3e-89 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | |||||
| JMFS020A08 | Sequence | 625 | 000402 (7) | ref|XP_011078363.1| | 2e-92 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | |||||
| JMFS020F02 | Sequence | 627 | 000402 (7) | ref|XP_011078363.1| | 3e-83 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | |||||
| JMFS031B04 | Sequence | 591 | 000402 (7) | ref|XP_011078363.1| | 6e-72 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | |||||
| JMFS067E07 | Sequence | 624 | 000402 (7) | ref|XP_011078363.1| | 7e-89 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | |||||
| JMSF016C21 | Sequence | 226 | 000402 (7) | ref|XP_011078363.1| | 1e-31 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | 736 | 008489 (2) | ref|XP_009627508.1| | 5e-36 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
| JMSF016L05 | Sequence | 545 | 000402 (7) | ref|XP_011078363.1| | 2e-78 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Se | 776 | 008489 (2) | ref|XP_009627509.1| | 2e-34 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 iso |
This contig is upended
. : . : . : . : . : . :
JMSF016L05+ GGGAACCCCCTCTCACCCG
____________________________________________________________
consensus GGGAACCCCCTCTCACCCG
. : . : . : . : . : . :
JMFS067E07+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS004G05+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS020F02+ TATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS020A08+ TATCTTCTATCCACATAAACATGCTTAATAAAATTACGAAGCCTCTCTACATTACTGC
JMSF016L05+ TGTATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
JMFS031B04+ TATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
____________________________________________________________
consensus TGTATCTTCTATCCACATAAACATGCTTAATAAAATCACGAAGCCTCTCTACATTACTTC
. : . : . : . : . : . :
JMFS067E07+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS004G05+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS020F02+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS020A08+ CATCAGGGAAAGAATTATTCTGTGGATCCCATTCTTTTAGATAAATTTCCTTTGCACTCG
JMSF016L05+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
JMFS031B04+ CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
____________________________________________________________
consensus CATCAGGGAGAGAATTGCGTTGTGGATCCAACTCCTTCAAATAAATTTCCTTTGCACTCG
. : . : . : . : . : . :
JMFS067E07+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS004G05+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS020F02+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS020A08+ CATTTCCACCTCCTTGTAAAGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATATTG
JMSF016L05+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
JMFS031B04+ CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
____________________________________________________________
consensus CATTTCCACCTCCTTGTAGTGCACTAACTTCTTGTGAAGTAAACTTAGCCATGGATACTG
. : . : . : . : . : . :
JMFS067E07+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS004G05+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS020F02+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS020A08+ ACTTCACTCTGTGTGTAAACTCCCGATGTATCCCACTGCAGGTTGTGCAAACAAATGTCC
JMSF016L05+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMSF016C21+ TGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
JMFS031B04+ ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
____________________________________________________________
consensus ACTTTACTCTGTGTGTAAACTCCCGATGTATGCCACTGCAGGTTGTGCAAATAAACGTTG
. : . : . : . : . : . :
JMFS067E07+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS004G05+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS020F02+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS020A08+ AAAAATTAATGCACACATATTGAGGCCCCAAGCTATTACAGTTGATGCACCTCCGGTTCT
JMSF016L05+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMSF016C21+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
JMFS031B04+ AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
____________________________________________________________
consensus AGAAGTTAATGCAGACATATTGAGGACCCAAGCTATTACAGTTTATACACCTCCGGTTGT
. : . : . : . : . : . :
JMFS067E07+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS004G05+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS020F02+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS020A08+ CGGGCAGCTTAAG
JMSF016L05+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMSF016C21+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
JMFS031B04+ CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
____________________________________________________________
consensus CAGGCAGCTTAAGTAGGCCCCGTATAATTCTCTCATTCTTCTCGTCCTCTTTGAACCGAT
. : . : . : . : . : . :
JMFS067E07+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMFS004G05+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTC
JMFS020F02+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMSF016L05+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
JMSF016C21+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAG
JMFS031B04+ TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
____________________________________________________________
consensus TCGCCATTTGGACACCAATCAAAGTCCTATTCTTCTCAATCCTCTGAGGGATAGACAGGG
. : . : . : . : . : . :
JMFS067E07+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMFS020F02+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMSF016L05+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
JMFS031B04+ TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
____________________________________________________________
consensus TGGAACTGGGAGGAATTGGTAGGGGTTTTACAGATCTTCAGTTTTTGGAAACAACGGATT
. : . : . : . : . : . :
JMFS067E07+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAA
JMFS020F02+ ACAGCTCAGAGTGCTTTTCTGAAAACAC
JMSF016L05+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAA
JMFS031B04+ ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAAGAGTGGGTGAAATTATAGG
____________________________________________________________
consensus ACAGCTCAGAGTGCTTTTCTGAAAACACGAAGAGAGAGAAAGAGTGGGTGAAATTATAGG
. : . : . : . : . : . :
JMFS031B04+ ATGCTGTGCGTACTCATAGGAGAAAAGTATGGATTCTATGTCTAGCATAGGATGGTTGAA
____________________________________________________________
consensus ATGCTGTGCGTACTCATAGGAGAAAAGTATGGATTCTATGTCTAGCATAGGATGGTTGAA