Contig 000396:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS005E02Sequence566000396 (15)ref|XP_009629144.1|1e-39PREDICTED: chaperone protein ClpD, chloroplastic isoform X3 [Nicotiana tomentos
JMFS024H09Sequence606000396 (15)ref|XP_009792236.1|3e-23PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana sylvestr
JMFS028D08Sequence643000396 (15)ref|XP_009629142.1|2e-41PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana tomentos
JMFS033F12Sequence585000396 (15)ref|XP_009792235.1|2e-18PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana sylvestr
JMFS045E03Sequence603000396 (15)ref|XP_009792236.1|3e-23PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana sylvestr
JMFS054D09Sequence621000396 (15)ref|XP_009629142.1|2e-55PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana tomentos
JMFS097F12Sequence562000396 (15)ref|XP_009629142.1|5e-15PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana tomentos
JMFS104E11Sequence642000396 (15)ref|XP_009629142.1|3e-49PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana tomentos
JMFS108B08Sequence627000396 (15)ref|XP_009629143.1|4e-37PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana tomentos
JMFS119B07Sequence616000396 (15)ref|XP_009629143.1|9e-43PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana tomentos
JMFS120A06Sequence627000396 (15)ref|XP_009792235.1|3e-41PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana sylvestr
JMFS143H01Sequence639000396 (15)ref|XP_009629143.1|9e-30PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana tomentos
JMFS144B11Sequence626000396 (15)ref|XP_009792235.1|4e-40PREDICTED: chaperone protein ClpD, chloroplastic isoform X1 [Nicotiana sylvestr
JMFS159D12Sequence451000396 (15)ref|XP_009629145.1|8e-09PREDICTED: chaperone protein ClpD, chloroplastic isoform X4 [Nicotiana tomentos
JMSF002C05Sequence315000396 (15)755008417 (3)ref|XP_010318683.1|5e-117PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Solanum lycopersic

Alignment

This contig is upended


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JMFS054D09+                      GTTATGCCCCATCGTCCTCGAGTACTCGACCGCAGCCTCGAAAACGCGC
                      ____________________________________________________________
consensus                        GTTATGCCCCATCGTCCTCGAGTACTCGACCGCAGCCTCGAAAACGCGC
 
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JMFS054D09+           TTGACACTTGCGGAAAAGCCTACGTCCGTGACCGAGGTAGCCGAAGCAGAGTGTTCAGAG
JMFS104E11-                      GGAAAAGCCTACGTCCGTGACCGAGGTAGCCGAAGCAGAGTGTTCAGAG
JMFS119B07+                                                                     AG
JMFS028D08+                                                                     AG
                      ____________________________________________________________
consensus             TTGACACTTGCGGAAAAGCCTACGTCCGTGACCGAGGTAGCCGAAGCAGAGTGTTCAGAG
 
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JMFS054D09+           CCCGATTTCGCATCCTCATCCTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS005E02+                                 CATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS104E11-           CCCGATTTCGCATCCTCATCCTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS119B07+           CCCGATTTCGCATCCTCATCCTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS028D08+           CCCGATTTCGCATCNTCATCNTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS120A06+                          TCATCCTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS144B11+                                  ATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
JMFS108B08+                                                AAATGCTCCGTACAGCTTCGCGG
                      ____________________________________________________________
consensus             CCCGATTTCGCATCCTCATCCTCATTTCCATCGTTCCAAATGCTCCGTACAGCTTCGCGG
 
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JMFS054D09+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS005E02+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS104E11-           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS119B07+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS028D08+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS120A06+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS144B11+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS108B08+           GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS143H01+                        TGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
JMFS045E03+                                                                 GCGATC
JMFS024H09+                                                                 GCGATC
                      ____________________________________________________________
consensus             GCCTTCTCAATCGTGATACCAGAGCTCAAAAACCCTCCGGAGCCGCGATCCTCTGCGATC
 
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JMFS054D09+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS005E02+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS104E11-           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS119B07+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS028D08+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS120A06+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS144B11+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS108B08+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS143H01+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS045E03+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS033F12+                          TGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
JMFS097F12+                                                 CCCCAACGCCTTGGCTTCCTTC
JMFS024H09+           AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
                      ____________________________________________________________
consensus             AGCCCTAGCAAAAGGTGCTCCGTAAACACCGTGTCTTTCCCCAACGCCTTGGCTTCCTTC
 
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JMFS054D09+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS005E02+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS104E11-           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS119B07+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS028D08+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS120A06+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS144B11+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS108B08+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS143H01+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS045E03+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS033F12+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS097F12+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS159D12+                        CCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
JMFS024H09+           TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
                      ____________________________________________________________
consensus             TGGGAGGTCACCACCGCTTTGACAGCTCTCTCGGTGAATCTCTCAAACACCCCGCAGACA
 
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JMFS054D09+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS005E02+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS104E11-           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS119B07+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS028D08+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS120A06+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS144B11+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS108B08+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS143H01+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS045E03+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS033F12+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS097F12+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS159D12+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
JMFS024H09+           ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
                      ____________________________________________________________
consensus             ATAGTCAGAGATCGCCTCTCTTTACGTGGAAGCGCGCCGCAGCCCCTGGCCGAAACTGAA
 
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JMFS054D09+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS005E02+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS104E11-           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS119B07+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS028D08+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS120A06+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS144B11+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS108B08+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS143H01+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS045E03+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS033F12+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS097F12+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMFS159D12+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
JMSF002C05+                                                                   GGAA
JMFS024H09+           ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
                      ____________________________________________________________
consensus             ATTCCGAAAAGCGACGAGGAGCTAGAGCTGGAGCTAGTACTGCACGACGCCCTAGCGGAA
 
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JMFS054D09+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS005E02+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS104E11-           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS119B07+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS028D08+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS120A06+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS144B11+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS108B08+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS143H01+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS045E03+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS033F12+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS097F12+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS159D12+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMSF002C05+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
JMFS024H09+           ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
                      ____________________________________________________________
consensus             ACATTGAGCGCGGCAGAACGAGATTTTGAGGAAAGGGAGCAGCGCACATACCGATTTTTC
 
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JMFS054D09+           CGGTGA                                                      
JMFS005E02+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS104E11-           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS119B07+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS028D08+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS120A06+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS144B11+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS108B08+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS143H01+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS045E03+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS033F12+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS097F12+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS159D12+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMSF002C05+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
JMFS024H09+           CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
                      ____________________________________________________________
consensus             CGGTGACTGTAAACCGAAACACGCCGGCCAAGCGGCGAAGAGAAGCGGTTAACGGTGGAG
 
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JMFS005E02+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACA       
JMFS104E11-           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS119B07+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS028D08+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS120A06+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS144B11+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS108B08+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS143H01+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS045E03+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS033F12+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS097F12+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS159D12+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMSF002C05+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
JMFS024H09+           TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
                      ____________________________________________________________
consensus             TTAACAGACAACGGCGATGAACACGACAATTCCATCTCAAAATCCTTCAAACACTATATA
 
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JMFS104E11-           TAGATATAGATATGCCACTTCTTCTGCACGTATCAGAGTAATAAATAGCCGAA       
JMFS119B07+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS028D08+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS120A06+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS144B11+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS108B08+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS143H01+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS045E03+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS033F12+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS097F12+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS159D12+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTC
JMSF002C05+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
JMFS024H09+           TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
                      ____________________________________________________________
consensus             TAGATATAGATATGCAACTTCTTGTCGGCCGGAAAGGAGGAGAGGAACACCGGCGAGCTG
 
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JMFS119B07+           CGGCGGAGGGAGAA                                              
JMFS028D08+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTT                   
JMFS120A06+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTG                  
JMFS144B11+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTT           
JMFS108B08+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS143H01+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS045E03+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS033F12+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS097F12+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS159D12+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGA                
JMSF002C05+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
JMFS024H09+           CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
                      ____________________________________________________________
consensus             CGGCGGAGGGAGAAGTTATCGGAGGCTTCAAAGGCACGTTTGGATCTTTGAAAGCTGCAA
 
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JMFS108B08+           GTTA                                                        
JMFS143H01+           GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAA        
JMFS045E03+           GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAATGCCA   
JMFS033F12+           GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAATGCCATAC
JMFS097F12+           GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAATGCCATAC
JMSF002C05+           G                                                           
JMFS024H09+           GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAATGCCATAC
                      ____________________________________________________________
consensus             GTTAGAAATGGTTGTATGGCACCAAATGATATATAAAAAAAGAGGATTTGAATGCCATAC