Contig 000389:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P06Sequence515000389 (4)ref|XP_011095467.1|2e-52PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]482021244ref|XP_011097829.1|6e-39PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum] ref|XP_0110
JMFS017G11Sequence611000389 (4)ref|XP_011095467.1|4e-78PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]
JMFS100B04Sequence599000389 (4)ref|XP_011095467.1|1e-77PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]
JMFS131F11Sequence619000389 (4)ref|XP_011095467.1|3e-70PREDICTED: 65-kDa microtubule-associated protein 1 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS100B04+ AAACT
JMFS017G11+ GCTCACAAACT
                      ____________________________________________________________
consensus GCTCACAAACT
 
. : . : . : . : . : . :
JMFS131F11+ TTTCTTTNTGAAGTTCTTGAAGCTGAACACCAA
JMFS100B04+ CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
JMFS017G11+ CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
                      ____________________________________________________________
consensus CAAGAACCTTGCGCAATCTCTCACTCTTTTCTTTTTGAAGTTCTTGAAGCTGAACACCAA
 
. : . : . : . : . : . :
JMFS131F11+ ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
JMFS100B04+ ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
JMFS017G11+ ATTCATCTAACTTTNTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
                      ____________________________________________________________
consensus ATTCATCTAACTTTTTCTGGGATAAATCAGACTCATCTACTTTCACACTCTCCGGCTGGT
 
. : . : . : . : . : . :
JMFS131F11+ CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
JMFS100B04+ CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
JMFF012P06+ TTTGAATTTGTGATTGTACATCAAAGAACT
JMFS017G11+ CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
                      ____________________________________________________________
consensus CACTAGTCCCCGATATCTCATTCCTTATCTTTTGAATTTGTGATTGTACATCAAAGAACT
 
. : . : . : . : . : . :
JMFS131F11+ CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFS100B04+ CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFF012P06+ CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
JMFS017G11+ CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
                      ____________________________________________________________
consensus CCTTTACCCTCTCCCCTTTCTGTTTCCACAGTTTCTCAAGTGCAGGTTCTATAGCTGCAA
 
. : . : . : . : . : . :
JMFS131F11+ GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFS100B04+ GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFF012P06+ GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
JMFS017G11+ GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
                      ____________________________________________________________
consensus GCTGTTCCTTGATTGTTCTTGAAGTTTTATCTGGGATAATCCCATTATTGCATGTCATCT
 
. : . : . : . : . : . :
JMFS131F11+ CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFS100B04+ CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFF012P06+ CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
JMFS017G11+ CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
                      ____________________________________________________________
consensus CTCCAAGTGATGCTTGAAGACTGGAGAGTTCATCTTTGGCATCTGCAAGTTCCTGAAGAA
 
. : . : . : . : . : . :
JMFS131F11+ GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFS100B04+ GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFF012P06+ GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
JMFS017G11+ GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
                      ____________________________________________________________
consensus GTTTAGCCCTACACTTCACTGCACAGCTGATCTTTCTCTTGTATACATCAAAACACTCTT
 
. : . : . : . : . : . :
JMFS131F11+ GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFS100B04+ GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFF012P06+ GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
JMFS017G11+ GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
                      ____________________________________________________________
consensus GTTCCAACTCAAGAAGCATCTTATCCCTCTCTTCATCACTTTCACCAACCTCATCCCATA
 
. : . : . : . : . : . :
JMFS131F11+ ATTTCTGCAGCTGCTGCAATAAAGTACCACA
JMFS100B04+ ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
JMFF012P06+ ATTTCTGCAGCTGCTGCAATAAAGTACCACA
JMFS017G11+ ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
                      ____________________________________________________________
consensus ATTTCTGCAGCTGCTGCAATAAAGTACCACAAGTAGGCTGGGGATCTTCAGCATCCACTG
 
. : . : . : . : . : . :
JMFS100B04+ CTTCCATTGC
JMFS017G11+ CTTCCATTGCCTGCTAAGTACACATAAAAAGCTCAGATTTTGTGTATAATCTGACTTTAA
                      ____________________________________________________________
consensus CTTCCATTGCCTGCTAAGTACACATAAAAAGCTCAGATTTTGTGTATAATCTGACTTTAA