Contig 000388:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS012D10Sequence635000388 (5)ref|XP_009767261.1|4e-69PREDICTED: protein LONGIFOLIA 2-like [Nicotiana sylvestris]
JMFS017A03Sequence627000388 (5)emb|CDP18061.1|8e-67unnamed protein product [Coffea canephora]
JMSF007F19Sequence477000388 (5)emb|CDP18061.1|2e-58unnamed protein product [Coffea canephora]717001031 (8)ref|XP_004236058.1|1e-62PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI
JMSF035G18Sequence681000388 (5)ref|XP_004236058.1|2e-70PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI633001031 (8)gb|KDO65710.1|1e-38hypothetical protein CISIN_1g001252mg [Citrus sinensis]
JMSF035J18Sequence682000388 (5)ref|XP_004236058.1|6e-71PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum] ref|XP_010318861.1| PREDI580001031 (8)ref|XP_006345115.1|1e-35PREDICTED: protein LONGIFOLIA 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS012D10+                                                    CTCGAGGCTGGCTTCATTG
                      ____________________________________________________________
consensus                                                      CTCGAGGCTGGCTTCATTG
 
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JMFS012D10+           CTGAATCGGGGTTCCTCCAACGAGGCGAAGTCGGATCCTTCCACAGGTTTCTCGTGGAGC
JMSF035G18+                                                 TTCCACAGGTTTCTCGTGGAGC
JMSF035J18+                                                 TTCCACAGGTTTCTCGTGGAGC
                      ____________________________________________________________
consensus             CTGAATCGGGGTTCCTCCAACGAGGCGAAGTCGGATCCTTCCACAGGTTTCTCGTGGAGC
 
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JMFS012D10+           TAGAAGTTTGGATATGTTTACATTTGTCACTTACTTCCGAAGACCTCGAGAGCGGGAGTG
JMSF035G18+           TAGAAGTTNGGATATGTTTACATTTGTCACTTACTTCCGAAGACCTCGAGAGCGGGAGTG
JMSF035J18+           TAGAAGTTNGGATATGTTTACATTTGTCACTTACTTCCGAAGACCTCGAGAGCGGGAGTG
                      ____________________________________________________________
consensus             TAGAAGTTTGGATATGTTTACATTTGTCACTTACTTCCGAAGACCTCGAGAGCGGGAGTG
 
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JMFS012D10+           GATCATCAACTCGACAATTCTTGGTCGACCTCGTATCACTATCACTCGGTGTCGAAGAAT
JMSF035G18+           GATCATCAACTCGACAATTCTTGGTCGACCTCGTATCACTATCACTCGGTGTCGAAGAAT
JMSF035J18+           GATCATCAACTCGACAATTCTTGGTCGACCTCGTATCACTATCACTCGGTGTCGAAGAAT
                      ____________________________________________________________
consensus             GATCATCAACTCGACAATTCTTGGTCGACCTCGTATCACTATCACTCGGTGTCGAAGAAT
 
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JMFS012D10+           CGGGAAGTGTTTCCAGACCCATTAGCTTAGCTACAACACTCGGAGGCCGTACCGAAGCCT
JMSF035G18+           CGGGAAGTGTTTCCAGACCCATTAGCTTAGCTACAACACTCGGAGGCCGTACCGAAGCCT
JMSF035J18+           CGGGAAGTGTTTCCAGACCCATTAGCTTAGCTACAACACTCGGAGGCCGTACCGAAGCCT
                      ____________________________________________________________
consensus             CGGGAAGTGTTTCCAGACCCATTAGCTTAGCTACAACACTCGGAGGCCGTACCGAAGCCT
 
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JMFS012D10+           CTCTACTACTGTCAAGTGAAAGTCTTGGGAGCTGTTTCAATGCAGATTTGGAAACGTCAC
JMSF035G18+           CTCTACTACTGTCAAGTGAAAGTCTTGGGAGCTGTTTCAATGCAGATTTGGAAACGTCAC
JMSF035J18+           CTCTACTACTGTCAAGTGAAAGTCTTGGGAGCTGTTTCAATGCAGATTTGGAAACGTCAC
JMSF007F19+             CTACTACTGTCAAGTGAAAGTCTTGGGAGCTGTTTCAATGCAGATTNGGAAACGTCAC
JMFS017A03+                                            GTTTCAATGCAGATTTGGAAACGTCAC
                      ____________________________________________________________
consensus             CTCTACTACTGTCAAGTGAAAGTCTTGGGAGCTGTTTCAATGCAGATTTGGAAACGTCAC
 
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JMFS012D10+           GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
JMSF035G18+           GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
JMSF035J18+           GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
JMSF007F19+           GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
JMFS017A03+           GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
                      ____________________________________________________________
consensus             GTGATTCAAAGGATAGATGACGGGTTTCCTTCCCATCATATGAAAACCGAGGAGCATCTT
 
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JMFS012D10+           TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
JMSF035G18+           TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
JMSF035J18+           TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
JMSF007F19+           TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
JMFS017A03+           TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
                      ____________________________________________________________
consensus             TGGAGATAGCAATAGAAGAACCATCTTTCGAGTGGTACGATGATGATCTCGAAAGTTGCC
 
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JMFS012D10+           TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
JMSF035G18+           TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
JMSF035J18+           TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
JMSF007F19+           TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
JMFS017A03+           TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
                      ____________________________________________________________
consensus             TAGGCTCATTGTAGTACCAAGGAGCTTCTCGAAGTTTAGCAAGAACTCTAAGAGATTCTT
 
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JMFS012D10+           TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
JMSF035G18+           TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
JMSF035J18+           TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
JMSF007F19+           TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
JMFS017A03+           TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
                      ____________________________________________________________
consensus             TAAGGTCAACGGGCGTATTCTGCTTTGCATAGAGTCCCGGTCCATAGCTCCCGTCAAAGG
 
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JMFS012D10+           TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
JMSF035G18+           TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
JMSF035J18+           TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
JMSF007F19+           TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
JMFS017A03+           TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
                      ____________________________________________________________
consensus             TTTGGGAAAGTTGCAATGGCCTAGGAGAATCCCGGTGCTTCGTAATAGATTCTGCCACCT
 
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JMFS012D10+           CCTCTCTGAGTGTCGA                                            
JMSF035G18+           CCTCTCTGAGTGTCGATTTCACCTGAGATTCTCTATTCATAGAGTCCTTAACCACGTCCC
JMSF035J18+           CCTCTCTGAGTGTCGATTTCACCTGAGATTCTCTATTCATAGAGTCCTTAACCACGTCCC
JMSF007F19+           CCTCTCTGAGTGTCGATTTCACCTGAGATTCTCTATTCATAGAGTCCTTAACCACGTCCC
JMFS017A03+           CCTCTCTGAGTGTCGATTTCACCTGAGATTCTCTATTCATAGAGTCCTTAACCACGTCCC
                      ____________________________________________________________
consensus             CCTCTCTGAGTGTCGATTTCACCTGAGATTCTCTATTCATAGAGTCCTTAACCACGTCCC
 
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JMSF035G18+           GAATATCGAGGCTTTGCCGACCATATTGAGACGTTTTTATCTGGTTCATTGCTTGGTCT 
JMSF035J18+           GAATATCGAGGCTTTGCCGACCATATTGAGACGTTTTTATCTGGTTCATTGCTTGGTCT 
JMSF007F19+           GAATATCGAGGCTTTGCCGACCATATTGAGACGTTTTTATCTGGTTCATTGCTTGGTCT 
JMFS017A03+           GAATATCGAGGCTTTGCCGACCATATTGAGACGTTTTTATCTGGTTCATTGCTTGGTCTC
                      ____________________________________________________________
consensus             GAATATCGAGGCTTTGCCGACCATATTGAGACGTTTTTATCTGGTTCATTGCTTGGTCTC
 
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JMFS017A03+           TCGAGGGAGTTTCGGGAAAAATCACGCGATCAAAAGCCATGGGCTCTGGCTGAACTGTTC
                      ____________________________________________________________
consensus             TCGAGGGAGTTTCGGGAAAAATCACGCGATCAAAAGCCATGGGCTCTGGCTGAACTGTTC
 
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JMFS017A03+           TATTACAATCAAGAGAAGAGAACGAAGAGGAGCGGGATGAAGACGAGAACGAGGGTCTCG
                      ____________________________________________________________
consensus             TATTACAATCAAGAGAAGAGAACGAAGAGGAGCGGGATGAAGACGAGAACGAGGGTCTCG
 
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JMFS017A03+           AXXXXXXXXXXXXXXXXXTTTGTTTCTCCTGAACGTTTTTATGAATTTGGTTATCTGGTC
                      ____________________________________________________________
consensus             ANNNNNNNNNNNNNNNNNTTTGTTTCTCCTGAACGTTTTTATGAATTTGGTTATCTGGTC