Contig 000386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS016E10Sequence623000386 (4)ref|XP_009587397.1|3e-42PREDICTED: WEB family protein At4g27595, chloroplastic [Nicotiana tomentosiform
JMFS040F06Sequence629000386 (4)ref|XP_006349708.1|92.4PREDICTED: centromere-associated protein E-like [Solanum tuberosum]
JMFS099H03Sequence615000386 (4)ref|XP_006349708.1|117PREDICTED: centromere-associated protein E-like [Solanum tuberosum]
JMFS141A11Sequence626000386 (4)ref|XP_011079894.1|1e-12PREDICTED: coiled-coil domain-containing protein 150 [Sesamum indicum] ref|XP_0

Alignment

This contig is upended


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JMFS099H03+                                        ATCGATGTCCTTGGAAGTACTCTCGGCTTCG
                      ____________________________________________________________
consensus                                          ATCGATGTCCTTGGAAGTACTCTCGGCTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           AGTCCTTCGCTCACTTTCATGAGCTCATAAGCCTTGTGCTCATACAAGCAATGACAAAAA
                      ____________________________________________________________
consensus             AGTCCTTCGCTCACTTTCATGAGCTCATAAGCCTTGTGCTCATACAAGCAATGACAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           CTGGAGATTTGCAATTCACTAAATAGCTCCTCCATTTCTGATTCCAATGTGCAGATCTCG
JMFS040F06+                     GCAATTCACTAAATAGCTCCTCCATTTCTGATTCCAATGTGCAGATCTCG
                      ____________________________________________________________
consensus             CTGGAGATTTGCAATTCACTAAATAGCTCCTCCATTTCTGATTCCAATGTGCAGATCTCG
 
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JMFS099H03+           CTCTTTTGTTTTTGGAGCTCAGAATGCAATGCATCGTTTTGCTCTTTCATCTTTCCATTC
JMFS040F06+           CTCTTTTGTTTTTGGAGCTCAGAATGCAATGCATCGTTTTGCTCTTTCATCTTTCCATTC
                      ____________________________________________________________
consensus             CTCTTTTGTTTTTGGAGCTCAGAATGCAATGCATCGTTTTGCTCTTTCATCTTTCCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TCCTCACGCAAGTGCCAAAGTCCATCCTCTAATAACCGAGTTGCTTCGTGAAGATTCCCA
JMFS040F06+           TCCTCACGCAAGTGCCAAAGTCCATCCTCTAATAACCGAGTTGCTTCGTGAAGATTCCCA
                      ____________________________________________________________
consensus             TCCTCACGCAAGTGCCAAAGTCCATCCTCTAATAACCGAGTTGCTTCGTGAAGATTCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TTCTCGGTCCTCAAATTATCACTTTCTGTGGATATCGATGTTATCTGTTTTGCTAGATCT
JMFS040F06+           TTCTCGGTCCTCAAATTATCACTTTCTGTGGATATCGATGTTATCTGTTTTGCTAGATCT
JMFS141A11+                        AATTATCACTTTCTGTGGATATCGATGTTATCTGTTNTGCTAGATCT
                      ____________________________________________________________
consensus             TTCTCGGTCCTCAAATTATCACTTTCTGTGGATATCGATGTTATCTGTTTTGCTAGATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TCTGTGGTCCTTTTAGCCTCACCGTGCTCTCGTATCAGATTCTGCAAACTTTCATGCAAC
JMFS040F06+           TCTGTGGTCCTTTTAGCCTCACCGTGCTCTCGTATCAGATTCTGCAAACTTTCATGCAAC
JMFS141A11+           TCTGTGGTCCTNTTAGCCTCACCGTGCTCTCGTATCAGATTCTGCAAACTTTCATGCAAC
                      ____________________________________________________________
consensus             TCTGTGGTCCTTTTAGCCTCACCGTGCTCTCGTATCAGATTCTGCAAACTTTCATGCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TCCAACTTCTCTTTGTCGGTGAGACTCAGTTTTTCCTCGACTTCCTGAAGTTTATGTTCC
JMFS040F06+           TCCAACTTCTCTTTGTCGGTGAGACTCAGTTTTTCCTCGACTTCCTGAAGTTTATGTTCC
JMFS141A11+           TCCAACTTCTCTTTGTCGGTGAGACTCAGTTTTTCCTCGACTTCCTGAAGTTTATGTTCC
                      ____________________________________________________________
consensus             TCCAACTTCTCTTTGTCGGTGAGACTCAGTTTTTCCTCGACTTCCTGAAGTTTATGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TTCTCCAACAAAGAACTATTTTTTATTTCAATATCACGATCCAATTGATTCTTGACAAAT
JMFS040F06+           TTCTCCAACAAAGAACTATTTTTTATTTCAATATCACGATCCAATTGATTCTTGACAAAT
JMFS141A11+           TTCTCCAACAAAGAACTATTTTTTATTTCAATATCACGATCCAATTGATTCTTGACAAAT
                      ____________________________________________________________
consensus             TTCTCCAACAAAGAACTATTTTTTATTTCAATATCACGATCCAATTGATTCTTGACAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H03+           TGAATGGTATTCAACTCGTCTTCCGACTTCTGCAGTGTCTTCATAAGGTTAAGATTTTCA
JMFS040F06+           TGAATGGTATTCAACTCGTCTTCCGACTTCTGCAGTGTCTTCATAAGGTTAAGATTTTCA
JMFS141A11+           TGAATGGTATTCAACTCGTCTTCCGACTTCTGCAGTGTCTTCATAAGGTTAAGATTTTCA
                      ____________________________________________________________
consensus             TGAATGGTATTCAACTCGTCTTCCGACTTCTGCAGTGTCTTCATAAGGTTAAGATTTTCA
 
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JMFS099H03+           AGCTTTAGCTCTTCCACCATCTTCTCGGTTAAGCTCAGTTTTTC                
JMFS040F06+           AGCTTTAGCTCTTCCACCATCTTCTCGGTTAAGCTCAGTTTTTCGCCTTTTTCACCATTG
JMFS141A11+           AGCTTTAGCTCTTCCACCATCTTCTCGGTTAAGCTCAGTTTTTCGCCTTTTTCACCATTG
                      ____________________________________________________________
consensus             AGCTTTAGCTCTTCCACCATCTTCTCGGTTAAGCTCAGTTTTTCGCCTTTTTCACCATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS040F06+           ATTTCATTAAGCTCGTTTAGCTCGGCAGCAAGCATCTTTAGTTCCAAAGATTTCTCATTG
JMFS141A11+           ATTTCATTAAGCTCGTTTAGCTCGGCAGCAAGCATCTTTAGTTCCAAAGATTTCTCATTG
                      ____________________________________________________________
consensus             ATTTCATTAAGCTCGTTTAGCTCGGCAGCAAGCATCTTTAGTTCCAAAGATTTCTCATTG
 
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JMFS040F06+           ACACAGTTCTTTAAAACCGCAAAAAGGCTCTCGAGAGAG                     
JMFS141A11+           ACACAGTTCTTTAAAACCGCAAAAAGGCTCTCGAGAGAGAGCATTTCACCGCAGATTACA
                      ____________________________________________________________
consensus             ACACAGTTCTTTAAAACCGCAAAAAGGCTCTCGAGAGAGAGCATTTCACCGCAGATTACA
 
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JMFS141A11+           TAATTTTCCTCTTCTAGGCTACGACTCCTTTCCTCCATTAAAGCCTTCTCTTCGTGAAGT
                      ____________________________________________________________
consensus             TAATTTTCCTCTTCTAGGCTACGACTCCTTTCCTCCATTAAAGCCTTCTCTTCGTGAAGT
 
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JMFS141A11+           TCTAAATGCTCTCTCTCCAAATTGTTGTAATCTCCTTGTAGATTCATCAACCTGCTGCCT
JMFS016E10+                                                GTAGATTCATCAACCTGCTGCCT
                      ____________________________________________________________
consensus             TCTAAATGCTCTCTCTCCAAATTGTTGTAATCTCCTTGTAGATTCATCAACCTGCTGCCT
 
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JMFS141A11+           AGATTCTCTACCTGAACTTCTAGCAGCTTCTCCTTGTGA                     
JMFS016E10+           AGATTCTCTACCTGAACTTCTAGCAGCTTCTCCTTGTGATCTTTCTCCTTTATCTTTGAT
                      ____________________________________________________________
consensus             AGATTCTCTACCTGAACTTCTAGCAGCTTCTCCTTGTGATCTTTCTCCTTTATCTTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS016E10+           TCCATTTCTTCGTTTGTCTCTTGCAGTTTAACAGCTTCACTCTGCAACGTGCAAAACCGA
                      ____________________________________________________________
consensus             TCCATTTCTTCGTTTGTCTCTTGCAGTTTAACAGCTTCACTCTGCAACGTGCAAAACCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS016E10+           TCAGATTCATTCCTGTACTCCCGCTCGATGGTGGTCTTTTCTAAACGGAGATTCTCTGCC
                      ____________________________________________________________
consensus             TCAGATTCATTCCTGTACTCCCGCTCGATGGTGGTCTTTTCTAAACGGAGATTCTCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS016E10+           GCTAATTCTAGCTGCCTCAGCAATGCGACAAGAACGAAATTTTCTACAATATTTTGCTGA
                      ____________________________________________________________
consensus             GCTAATTCTAGCTGCCTCAGCAATGCGACAAGAACGAAATTTTCTACAATATTTTGCTGA
 
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JMFS016E10+           TTTTCTTCCTCAGTTCTGGTTAAAGACTTCAATAACTTGTGCATCTCGTTCCTCAGAGTA
                      ____________________________________________________________
consensus             TTTTCTTCCTCAGTTCTGGTTAAAGACTTCAATAACTTGTGCATCTCGTTCCTCAGAGTA
 
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JMFS016E10+           CTAGCCTGATCGGACAAAGATTTTGCCTCGGTTTTCTGTTCGAGATTCCTTTGCTCTAAG
                      ____________________________________________________________
consensus             CTAGCCTGATCGGACAAAGATTTTGCCTCGGTTTTCTGTTCGAGATTCCTTTGCTCTAAG
 
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JMFS016E10+           TCTAGAATCCGTTTCTCTGACAATGCAGATGCTTCTAGAAGCTTGTGATATTCGGTCAGC
                      ____________________________________________________________
consensus             TCTAGAATCCGTTTCTCTGACAATGCAGATGCTTCTAGAAGCTTGTGATATTCGGTCAGC
 
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JMFS016E10+           AGAGAGGAACTCTTTCCTTGAAGATCTCGTGCACTTTTCTGCAAGATGAAGATCTGAATT
                      ____________________________________________________________
consensus             AGAGAGGAACTCTTTCCTTGAAGATCTCGTGCACTTTTCTGCAAGATGAAGATCTGAATT
 
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JMFS016E10+           TGAGCGTCCAAAGCTTTATCGAGCTCCTCGGAGTATTCTCGAGTTCTGCATTGTAAGTCT
                      ____________________________________________________________
consensus             TGAGCGTCCAAAGCTTTATCGAGCTCCTCGGAGTATTCTCGAGTTCTGCATTGTAAGTCT
 
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JMFS016E10+           TCTCGTAAAAGGTGCATCTCGGATTCCATAGCAGACAACTGTTTATTACTCGTCTGAATG
                      ____________________________________________________________
consensus             TCTCGTAAAAGGTGCATCTCGGATTCCATAGCAGACAACTGTTTATTACTCGTCTGAATG