Contig 000383:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019A02Sequence606000383 (6)ref|XP_006338753.1|6e-102PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal-like [Solanum tub756008373 (4)emb|CDP16759.1|2e-122unnamed protein product [Coffea canephora]
JMFF019I14Sequence574000383 (6)ref|XP_009802178.1|1e-66PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [144008373 (4)
JMFF020C06Sequence396000383 (6)ref|XP_006338753.1|4e-37PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal-like [Solanum tub745022328ref|XP_008379025.1|3e-76PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal [Malus domestica]
JMFF048F15Sequence411000383 (6)ref|XP_006338753.1|2e-41PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal-like [Solanum tub257008373 (4)
JMFS009F04Sequence598000383 (6)ref|XP_006338753.1|1e-60PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal-like [Solanum tub
JMFS082A03Sequence621000383 (6)ref|XP_006338753.1|1e-84PREDICTED: acetate--CoA ligase ACS, chloroplastic/glyoxysomal-like [Solanum tub

Alignment

This contig is upended


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JMFF019A02+                       TCAAGTAATTTGCAAGCTGGCAAACTCTTGCTAACAGTTGGTTGTATG
JMFF019I14+                                                               GTTGTATG
                      ____________________________________________________________
consensus                         TCAAGTAATTTGCAAGCTGGCAAACTCTTGCTAACAGTTGGTTGTATG
 
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JMFF019A02+           TCAGAGTTGCGTCAACTCCAGGCTCATTTCCTTCCCAATAAATTGCGATTTTGTCACCAT
JMFF019I14+           TCAGAGTTGCGTCAACTCCAGGCTCATTTCCTTCCCAATAAATTGCGATTTTGTCACCAT
JMFS082A03+                               GGCTCATTTCCTTCCCAATAAATTGCGATTNTGTCACCAT
                      ____________________________________________________________
consensus             TCAGAGTTGCGTCAACTCCAGGCTCATTTCCTTCCCAATAAATTGCGATTTTGTCACCAT
 
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JMFF019A02+           TTCCAGATTCAATGTTTCTATCCAAGCAGTTGTAACAAATATTGGTGATCCCACCTTTGA
JMFF019I14+           TTCCAGATTCAATGTTTCTATCCAAGCAGTTGTAACAAATATTGGTGATCCCACCTTTGA
JMFS082A03+           TTCCAGATTCAATGTTTCTATCCAAGCAGTTGTAACAAATATTGGTGATCCCACCTTTGA
                      ____________________________________________________________
consensus             TTCCAGATTCAATGTTTCTATCCAAGCAGTTGTAACAAATATTGGTGATCCCACCTTTGA
 
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JMFF019A02+           ACCACTCAATATGAATTTTCCCCTTACGTATGTCAAGATTATCGTGGCAAACCTGATGAT
JMFF019I14+           ACCACTCAATATGAATTTTCCCCTTACGTATGTCAAGATTATCGTGGCAAACCTGATGAT
JMFS082A03+           ACCACTCAATATGAATTTTCCCCTTACGTATGTCAAGATTATCGTGGCAAACCTGATGAT
JMFS009F04+            CCACTCAATATGAATTTTCCCCTTACGTATGTCAAGATTATCGTGGCAAACCTGATGAT
                      ____________________________________________________________
consensus             ACCACTCAATATGAATTTTCCCCTTACGTATGTCAAGATTATCGTGGCAAACCTGATGAT
 
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JMFF019A02+           CCCATTTTTCTTTCCAATAAAACTGAGATGCAATGTCTGCCCAGAATCCGCTGGGATCCT
JMFF019I14+           CCCATTTTTCTTTCCAATAAAACTGAGATGCAATGTCTGCCCAGAATCCGCTGGGATCCT
JMFF048F15+                                              TCTGCCCAGAATCCGCTGGGATCCT
JMFS082A03+           CCCATTTTTCTTTCCAATAAAACTGAGATGCAATGTCTGCCCAGAATCCGCTGGGATCCT
JMFS009F04+           CCCATTTTTCTTTCCAATAAAACTGAGATGCAATGTCTGCCCAGAATCCGCTGGGATCCT
                      ____________________________________________________________
consensus             CCCATTTTTCTTTCCAATAAAACTGAGATGCAATGTCTGCCCAGAATCCGCTGGGATCCT
 
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JMFF019A02+           CAACGGACCTTTGATACATCTCCAAATACTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
JMFF020C06+                                       CTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
JMFF019I14+           CAACGGAC--------------------CTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
JMFF048F15+           CAACGGACCTNTGATACATCTCCAAATACTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
JMFS082A03+           CAACGGACCTTTGATACATCTCCAAATACTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
JMFS009F04+           CAACGGACCTTTGATACATCTCCAAATACTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
                      ____________________________________________________________
consensus             CAACGGACCTTTGATACATCTCCAAATACTCTTGGGGGGAAGAAACGTGCGCCTGTCGGG
 
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JMFF019A02+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
JMFF020C06+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
JMFF019I14+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
JMFF048F15+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
JMFS082A03+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
JMFS009F04+           AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
                      ____________________________________________________________
consensus             AGAAATCCTCATTAGGGAAGACGAGATCGTCCTCTTCAGAAGCAAGTGCCTCCCCAAGGA
 
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JMFF019A02+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
JMFF020C06+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
JMFF019I14+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
JMFF048F15+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
JMFS082A03+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
JMFS009F04+           TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
                      ____________________________________________________________
consensus             TAACGGCGTTCAATCTAGGTATCTTGCCGGCGCCTGATGGAAGGTTAGCCATAGACTCGA
 
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JMFF019A02+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
JMFF020C06+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
JMFF019I14+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
JMFF048F15+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
JMFS082A03+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
JMFS009F04+           CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
                      ____________________________________________________________
consensus             CATGACGCAAATGATTGGATGTGGTCAAAATCTTCCGAGGACTGATCTTAGAAGACAAAG
 
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JMFF019A02+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
JMFF020C06+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
JMFF019I14+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
JMFF048F15+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
JMFS082A03+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
JMFS009F04+           AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTC-TTCTCTTTCTCTAT
                      ____________________________________________________________
consensus             AAGAATCGGATCTCGCAAAATGGTCTTCCATGGTCACAAAAGCTCTTTCTCTTTCTCTAT
 
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JMFF019A02+           TCCCGGCGGCTGAACAAC                                          
JMFF020C06+           TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGCCTAT              
JMFF019I14+           TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGCCTAT              
JMFF048F15+           TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGACTATAGACCAGGTCTGGC
JMFS082A03+           TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGACTATAGACCAGGTCTGGC
JMFS009F04+           TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGACTATAGACCAGGTCTGGC
                      ____________________________________________________________
consensus             TCCCGGCGGCTGAACAACAAATACAAAGTTTTTTGTGGTTGACTATAGACCAGGTCTGGC
 
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JMFF048F15+           ACTGGCAGGTAGCCTTCAAATTGTGC                                  
JMFS082A03+           ACTGGCAGGTAGCCTTCAAATTGTGCGAGAACGGAATCTGA                   
JMFS009F04+           ACTGGCAGGTAGCCTTCAAATTGTGCGAGAACGGAATCTGATTGCGTATCGCAGCAGAAG
                      ____________________________________________________________
consensus             ACTGGCAGGTAGCCTTCAAATTGTGCGAGAACGGAATCTGATTGCGTATCGCAGCAGAAG
 
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JMFS009F04+           CAGCTACAGCTGTCCCATTATTATAGCAAGTAATAATACAGTTAAACGAGGGAACGACCA
                      ____________________________________________________________
consensus             CAGCTACAGCTGTCCCATTATTATAGCAAGTAATAATACAGTTAAACGAGGGAACGACCA