Contig 000376:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+                                        CGGCCTGCATACTCGCCACAGCTCTACTCAT
                      ____________________________________________________________
consensus                                          CGGCCTGCATACTCGCCACAGCTCTACTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           CGTCGATGATCCACTGGCTCCGCCGCTTCCACTTTTTCTCGTCCTCATTACCACTGTCCC
                      ____________________________________________________________
consensus             CGTCGATGATCCACTGGCTCCGCCGCTTCCACTTTTTCTCGTCCTCATTACCACTGTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           CGCATCAAACTCGCTGCTATCTCTCACCACGAAAGTGGAAAAATTAACTTCCTCTTCCTC
JMFS004A01+                                       ACGAAAGTGGAAAAATTANCTTCCTCTTCCTC
                      ____________________________________________________________
consensus             CGCATCAAACTCGCTGCTATCTCTCACCACGAAAGTGGAAAAATTAACTTCCTCTTCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           ATCATCATCGTCCTCCTCTTCGTCACCCTCATCCTCAACTCTCCGCTCCCAATACGACGC
JMFS004A01+           ATCATCATCGTCCTCCTCTTCGTCACCCTCATCCTCAACTCTCCGCTCCCAATACGACGC
                      ____________________________________________________________
consensus             ATCATCATCGTCCTCCTCTTCGTCACCCTCATCCTCAACTCTCCGCTCCCAATACGACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           CGGTCCTGAGCGATGCTTTCGGTACGGAGACGACGGATTTGAATACATCGAGCTGCGACT
JMFS004A01+           CGGTCCTGAGCGATGCTTTCGGTACGGAGACGACGGATTTGAATACATCGAGCTGCGACT
                      ____________________________________________________________
consensus             CGGTCCTGAGCGATGCTTTCGGTACGGAGACGACGGATTTGAATACATCGAGCTGCGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           GGTCTTGACTATCATTGTCCCGGAAATTGAGCCCGCCTCGTTGTCGGAATCGGAATCAAT
JMFS004A01+           GGTCTTGACTATCATTGTCCCGGAAATTGAGCCCGCCTCGTTGTCGGAATCGGAATCAAT
                      ____________________________________________________________
consensus             GGTCTTGACTATCATTGTCCCGGAAATTGAGCCCGCCTCGTTGTCGGAATCGGAATCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           TAGACCGCCGCCGCCGAAGTCCTTAGGGAGTCGTTTGAGTAGCGGAGGGAGCGAATCGTC
JMFS004A01+           TAGACCGCCGCCGCCGAAGTCCTTAGGGAGTCGTTTGAGTAGCGGAGGGAGCGAATCGTC
                      ____________________________________________________________
consensus             TAGACCGCCGCCGCCGAAGTCCTTAGGGAGTCGTTTGAGTAGCGGAGGGAGCGAATCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           GTCGTTTGGATCATCAACGACGTCGACGTCGTCGGCGTCGTCCTTGTAGACGATCGTGGC
JMFS004A01+           GTCGTTTGGATCATCAACGACGTCGACGTCGTCGGCGTCGTCCTTGTAGACGATCGTGGC
                      ____________________________________________________________
consensus             GTCGTTTGGATCATCAACGACGTCGACGTCGTCGGCGTCGTCCTTGTAGACGATCGTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           GTAAAGGTCCGAGGCATCCGTTTCTGCGGCGACATTTTTGTTCTTGTCATTGCCTTGGAC
JMFS004A01+           GTAAAGGTCCGAGGCATCCGTTTCTGCGGCGACATTTTTGTTCTTGTCATTGCCTTGGAC
                      ____________________________________________________________
consensus             GTAAAGGTCCGAGGCATCCGTTTCTGCGGCGACATTTTTGTTCTTGTCATTGCCTTGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           GACGACGGTGGAGTAGATGTCCGTCAGCTTCGGCGGAGGCGGTTTCCGGCTCCGCCAAGG
JMFS004A01+           GACGACGGTGGAGTAGATGTCCGTCAGCTTCGGCGGAGGCGGTTTCCGGCTCCGCCAAGG
                      ____________________________________________________________
consensus             GACGACGGTGGAGTAGATGTCCGTCAGCTTCGGCGGAGGCGGTTTCCGGCTCCGCCAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D01+           GGTCTGCGAAAAGTCCATCTCTAGTCTCTCACTTGCGTTTGACCAGACTGGAAA      
JMFS004A01+           GGTCTGCGAAAAGTCCATCTCTAGTCTCTCACTTGCGTTTGACCAGACTGGAAATTCCGC
                      ____________________________________________________________
consensus             GGTCTGCGAAAAGTCCATCTCTAGTCTCTCACTTGCGTTTGACCAGACTGGAAATTCCGC