Contig 000374:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018G06Sequence622004533 (16)ref|XP_009780494.1|5e-63PREDICTED: receptor-like protein kinase HSL1 [Nicotiana sylvestris]745000374 (8)ref|XP_004232923.1|6e-75PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMFN013L18Sequence616000374 (8)ref|XP_004232923.1|1e-78PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMFN016O17Sequence526000374 (8)ref|XP_004232923.1|2e-54PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMFS002B03Sequence465000374 (8)ref|XP_009621303.1|2e-94PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tomentosiformis]
JMFS141G11Sequence586000374 (8)ref|XP_004232923.1|4e-56PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMFS157G03Sequence626000374 (8)ref|XP_004232923.1|2e-68PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMSF017H01Sequence229004533 (16)786000374 (8)ref|XP_004232923.1|2e-70PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
JMSF050A19Sequence600004533 (16)ref|XP_009621303.1|8e-52PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tomentosiformis]329000374 (8)ref|XP_009621303.1|4e-17PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF018G06- ATTTTGTTCTTCCAGCACATTAAAAAAAATTCACCACAACAAACAATGCTGGGGGACATC
rJMSF017H01- AATTCACCACAACAAACAATGCTGGGGGACATC
                      ____________________________________________________________
consensus ATTTTGTTCTTCCAGCACATTAAAAAAAATTCACCACAACAAACAATGCTGGGGGACATC
 
. : . : . : . : . : . :
JMFS141G11+ TAATACTACTTTTAGCTTCACCTTCATTGTAGAACACAAGT
rJMFF018G06- AGATCAGAGAGTACT-GTTTAATACTACTTTTAGCTTCACCTTCATTGTAGAACACAAGT
rJMSF017H01- AGATCAGAGAGTACTGGTTTAATACTACTTTTAGCTTCACCTTCATTGTAGAACACAAGT
                      ____________________________________________________________
consensus AGATCAGAGAGTACTGGTTTAATACTACTTTTAGCTTCACCTTCATTGTAGAACACAAGT
 
. : . : . : . : . : . :
JMFS141G11+ ACAAAACCTTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
JMFS157G03+ TTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
rJMSF050A19- AAGT
JMFN016O17+ ACAAAACCTTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
rJMFF018G06- ACAAAACCTTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
JMFN013L18+ TAGGAACAGGAATATTGGAAGCAAAGT
rJMSF017H01- ACAAAACCTTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
                      ____________________________________________________________
consensus ACAAAACCTTAAATGCATACAACTTGTTCAAACTAGGAACAGGAATATTGGGAGCAAAGT
 
. : . : . : . : . : . :
JMFS141G11+ TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
JMFS157G03+ TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
rJMSF050A19- TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
JMFN016O17+ TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
rJMFF018G06- TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
JMFN013L18+ TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
rJMSF017H01- TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
                      ____________________________________________________________
consensus TTTGTCGTTGAGTAATTTACAGATTACACTATGCAATTCAAGCAAGCACACTTCAATTCC
 
. : . : . : . : . : . :
JMFS141G11+ TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
JMFS157G03+ TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
rJMSF050A19- TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
JMFN016O17+ TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
rJMFF018G06- TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
JMFN013L18+ TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
rJMSF017H01- TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
                      ____________________________________________________________
consensus TGAAGTGATTAATTTTCTGCTCTCCTTTCCTGCTGTGAGATGAACAAGATCGAATCCATG
 
. : . : . : . : . : . :
JMFS141G11+ ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
JMFS157G03+ ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
rJMSF050A19- ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
JMFN016O17+ ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
rJMFF018G06- ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
JMFN013L18+ ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
rJMSF017H01- ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
                      ____________________________________________________________
consensus ATGAGATGGGCGGGCGGGGGCTTGGCTTCGACCTCGATCTCTAAGCTACACTTCCGTTGT
 
. : . : . : . : . : . :
JMFS141G11+ CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
JMFS157G03+ CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
rJMSF050A19- CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
JMFN016O17+ CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
rJMFF018G06- CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
JMFN013L18+ CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
rJMSF017H01- CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
                      ____________________________________________________________
consensus CTGAGGCATCCTCGTAGTAGTAAGGCGTGAGTTTGCCATCCTTGGAGCCCGACTTGGGGT
 
. : . : . : . : . : . :
JMFS141G11+ GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
JMFS157G03+ GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
rJMSF050A19- GGTTTGNAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCANGGANGGTCGGTTGA
JMFN016O17+ GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
rJMFF018G06- GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
JMFN013L18+ GGTTTGCAGCGCCGATTTCTTGCGGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
rJMSF017H01- GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
                      ____________________________________________________________
consensus GGTTTGCAGCGCCGATTTCTTGCAGCATCTTCACCACGCGTCTCATGGAGGGTCGGTTGA
 
. : . : . : . : . : . :
JMFS141G11+ TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCAGATTTCCTCCTTGA
JMFS157G03+ TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCANATTTCCTCGTTGA
rJMSF050A19- TGGGGAGAG
JMFN016O17+ TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCAGATTTCCTCCTTGA
rJMFF018G06- TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCAGATTTCCTCCTTGA
JMFN013L18+ TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCAGATTTCCTCCTTGA
rJMSF017H01- TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCGGGGCTTTGCAGATTTCCTCCTTGA
                      ____________________________________________________________
consensus TGGGGAGAGGGCTGGTGCAGAGGAGGCCTATGTTCAGGGCTTTGCAGATTTCCTCCTTGA
 
. : . : . : . : . : . :
JMFS141G11+ AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
JMFS157G03+ AACAAGTCTCGAGGTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
JMFN016O17+ AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
rJMFF018G06- AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
JMFN013L18+ AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
rJMSF017H01- AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
                      ____________________________________________________________
consensus AACAAGTCTCGAGTTTTGGATCAATCACATGGTCGACGCCCTTCTGGTCTAACGTGATGC
 
. : . : . : . : . : . :
JMFS141G11+ ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTCCCCGTGG
JMFS157G03+ ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTGGGCGTGG
JMFN016O17+ ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGG
rJMFF018G06- ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTCCCCGTGG
JMFN013L18+ ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTCCCCGTGG
rJMSF017H01- ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTCCCCGTGG
                      ____________________________________________________________
consensus ATACCCACTTCACCAGATCCTTTTCCCCGAATTCAGGATCAACGGGGAGCCTCCCCGTGG
 
. : . : . : . : . : . :
JMFS141G11+ CTAAC
JMFS157G03+ CTAGGGCCAGAATCACCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
rJMFF018G06- CTAACTCCAGAATCACCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
JMFN013L18+ CTAACTCCAGAATCACCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
rJMSF017H01- CTAACTCCAGAATCACCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
JMFS002B03+ CCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
                      ____________________________________________________________
consensus CTAACTCCAGAATCACCACCCCAAAACTGTATATATCGCTCTTCTCGTTCACTCTAAGTG
 
. : . : . : . : . : . :
JMFS157G03+ TATAGGCATACTC
rJMFF018G06- TATAGGCATACTCTG
JMFN013L18+ TATAGGCATACTCTG
rJMSF017H01- TATAGGCATACTCTG
JMFS002B03+ TATAGGCATACTCTGGTGCAATATAGCCACACGAGCCTACAACTCGAGACATGGATTTCG
                      ____________________________________________________________
consensus TATAGGCATACTCTGGTGCAATATAGCCACACGAGCCTACAACTCGAGACATGGATTTCG
 
. : . : . : . : . : . :
JMFS002B03+ TTCCTTTTTCGTTTGCATCGACCACCTTGGCTATCCCGAAGTCAGCAACTCGAGCGCCAA
                      ____________________________________________________________
consensus TTCCTTTTTCGTTTGCATCGACCACCTTGGCTATCCCGAAGTCAGCAACTCGAGCGCCAA
 
. : . : . : . : . : . :
JMFS002B03+ AATCCCCATCTAGGAGTATATTATTCGACTTCACATCTCTGTGGACGATTGGGGGAGCAC
                      ____________________________________________________________
consensus AATCCCCATCTAGGAGTATATTATTCGACTTCACATCTCTGTGGACGATTGGGGGAGCAC
 
. : . : . : . : . : . :
JMFS002B03+ AATCGTGGTGAAGATAGGAGAGCCCCTCTGCAGCATCCATGGCGATTTTATACCTCATAG
                      ____________________________________________________________
consensus AATCGTGGTGAAGATAGGAGAGCCCCTCTGCAGCATCCATGGCGATTTTATACCTCATAG
 
. : . : . : . : . : . :
JMFS002B03+ GCCAATCCAGGAGGCCGCTTTTGCTGCTGTGTAGCAAATCGCCCAAGCTCCCGTTGGGCA
                      ____________________________________________________________
consensus GCCAATCCAGGAGGCCGCTTTTGCTGCTGTGTAGCAAATCGCCCAAGCTCCCGTTGGGCA
 
. : . : . : . : . : . :
JMFS002B03+ TGTACTCGTAAACCAAAAGCTTGCAATCTCGTGTAATACATGAACAAAATAGCTTAACAA
                      ____________________________________________________________
consensus TGTACTCGTAAACCAAAAGCTTGCAATCTCGTGTAATACATGAACAAAATAGCTTAACAA
 
. : . : . : . : . : . :
JMFS002B03+ TGTTCTTATGCCTAATCTTCCCCAATGTCTCGATCTCTGCTTCAAACCCGTCGTCTTGAG
                      ____________________________________________________________
consensus TGTTCTTATGCCTAATCTTCCCCAATGTCTCGATCTCTGCTTCAAACCCGTCGTCTTGAG