Contig 000373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023A10Sequence506017354ref|XP_009607764.1|6e-55PREDICTED: LOB domain-containing protein 41-like [Nicotiana tomentosiformis]567000373 (3)ref|XP_011099556.1|1e-15PREDICTED: LOB domain-containing protein 41 [Sesamum indicum]
JMFF037K08Sequence580000373 (3)ref|XP_011099556.1|1e-09PREDICTED: LOB domain-containing protein 41 [Sesamum indicum]
JMFN046P07Sequence572000373 (3)ref|XP_011099556.1|2e-20PREDICTED: LOB domain-containing protein 41 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF023A10+ CTTCCTTTAAAAGCTTGTGACATTGGACNCGTGCNCTACAAGGAAGGAAATCGCGGC
rJMFF037K08+ TCCTTCCTTTAAAAGCTTGTGACATTGGACACGTGCACTACAAGGAAGGAAATCGNGGC
JMFN046P07- TGGACACGTGCACTACAAGGAAGGAAATCGCGGC
                      ____________________________________________________________
consensus TCCTTCCTTTAAAAGCTTGTGACATTGGACACGTGCACTACAAGGAAGGAAATCGCGGC
 
. : . : . : . : . : . :
rJMFF023A10+ AAGTCCGGCGATTTTCNCCGGGTCAGGAACCGGGGCCGGTTCAAGAGGTCGGGTGCCAAG
rJMFF037K08+ AAGTCCGGNGATTTTCNCCGGGTCAGGAACCGGGGCCGGTTCAAGAGGTNGGGTGCCAAG
JMFN046P07- AAGTCCGGCGATCTTCACCGGGTCAGGAACCGGGGCCGGTTCAAGAGGTCGGGTGCCAAG
                      ____________________________________________________________
consensus AAGTCCGGCGATTTTCACCGGGTCAGGAACCGGGGCCGGTTCAAGAGGTCGGGTGCCAAG
 
. : . : . : . : . : . :
rJMFF023A10+ ATCAAGGAAAGTAGTNTNTGTNCCGGGTCGAGCGACGAGGAGGTGAACCGATCAACGAGT
rJMFF037K08+ ATCAAGGAAAGTAGTNTNTGTNCCGGGTCGAGCGACGAGGAGGTGAACCGATCAACGAGT
JMFN046P07- ATCAAGGAAAGTAGTATCTGTGCCGGGTCGAGCGACGAGGAGGTGAACCGATCAACGAGT
                      ____________________________________________________________
consensus ATCAAGGAAAGTAGTATCTGTGCCGGGTCGAGCGACGAGGAGGTGAACCGATCAACGAGT
 
. : . : . : . : . : . :
rJMFF023A10+ CNCGAATCCTNGTTGTGCCATCAGTCGCCGGCGGCCAATGAAGAACCGGAAAGTCGCCAG
rJMFF037K08+ CNCGAATCCTNGTTGTGCCATCAGTCGCCGGCGGCCAATGAAGAACCGGAAAGTCGCCAG
JMFN046P07- CACGAATCCTCGTTGTGCCATCAGTCGCCGGCGGCCAATGAAGAACCGGAAAGTCGCCAG
                      ____________________________________________________________
consensus CACGAATCCTCGTTGTGCCATCAGTCGCCGGCGGCCAATGAAGAACCGGAAAGTCGCCAG
 
. : . : . : . : . : . :
rJMFF023A10+ ATCCAGAGACTGAACTCCGTTGAGATATNTCAGCCGGCGCCGGATGTNCGGCATGCCGAC
rJMFF037K08+ ATCCAGAGACTGAACTCCGTTGAGATATNTCAGCCGGCGCCGGATGTNCGGCATGCCGAC
JMFN046P07- ATCCAGAGACTGAACTCCGTTGAGATATCTCAGCCGGCGCCGGATGTACGGCATGCCGAC
                      ____________________________________________________________
consensus ATCCAGAGACTGAACTCCGTTGAGATATCTCAGCCGGCGCCGGATGTACGGCATGCCGAC
 
. : . : . : . : . : . :
rJMFF023A10+ GACGACGAAATTGAACTTGAGCTGACTNTTGGGTTCGCGCCGAGAGTGAAGTGACTNCCG
rJMFF037K08+ GACGACGAAATTGAACTTGAGCTGACTNTTGGGTTCGCGCCGAGAGTGAAGTGACTNCCG
JMFN046P07- GACGACGAAATTGAACTTGAGCTGACTCTTGGGTTCGCGCCGAGAGTGAAGTGACTACCG
                      ____________________________________________________________
consensus GACGACGAAATTGAACTTGAGCTGACTCTTGGGTTCGCGCCGAGAGTGAAGTGACTACCG
 
. : . : . : . : . : . :
rJMFF023A10+ GCTATGACGAAGANCCGAAGAGTGCATCGGTGATNGTGGCCTTTGATTCCCNCGGTGCAA
rJMFF037K08+ GCTATGACGAAGAGCCGAAGAGTGCATCGGTGATNGTGGCCTTTGATTCCCNCGGNGCAA
JMFN046P07- GCTATGACGAAGAGCCGAAGAGTGCATCGGTGATCGTGGCCTTTGATTCCCACGGTGCAA
                      ____________________________________________________________
consensus GCTATGACGAAGAGCCGAAGAGTGCATCGGTGATCGTGGCCTTTGATTCCCACGGTGCAA
 
. : . : . : . : . : . :
rJMFF023A10+ TCAGTTTTGACGGCTCAGATTTACAGTTTNTNTTGA-TTTTTTTTTTCCTTTTAATACTC
rJMFF037K08+ TCAGTTTTGACGGNTCAGATTTACAGTTTNTCTTGATTTTTTTTTTTCCTTTTAATACTC
JMFN046P07- TCAGTTTTGACGGCTCAGATTTACAGTTTCTCTTGA--TTTTTTTTTCCTTTTAATACTC
                      ____________________________________________________________
consensus TCAGTTTTGACGGCTCAGATTTACAGTTTCTCTTGA-TTTTTTTTTTCCTTTTAATACTC
 
. : . : . : . : . : . :
rJMFF023A10+ TGTACCAAATATGTATACCCTGTATACACGTAGGCATAGTAATTAGCGATAGAGTCATAG
rJMFF037K08+ TGTACCAAATATGTATACCCTGTATACACGTAGGCATAGTAATTAGCGATAGAGTCATAG
JMFN046P07- TGTACCAAATATGTATACCCTGTATACACGTAGGCATAGTAATTAGCGATAGAGTCATAG
                      ____________________________________________________________
consensus TGTACCAAATATGTATACCCTGTATACACGTAGGCATAGTAATTAGCGATAGAGTCATAG
 
. : . : . : . : . : . :
rJMFF023A10+ AGACACGGGAAGGATCTTCTTATGAATA
rJMFF037K08+ AGACACGGGAAGGATCTTCTTATGAATANACAGANATATAT
JMFN046P07- AGACACGGGAAGGATCTTCTTATGAATATACAGATATATATGTTTTTTTTTAAATAATTC
                      ____________________________________________________________
consensus AGACACGGGAAGGATCTTCTTATGAATATACAGATATATATGTTTTTTTTTAAATAATTC