Contig 000372:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008M13Sequence596010232 (6)ref|XP_004239242.1|81.3PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum]695000372 (6)ref|XP_010656174.1|2e-49PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera]
JMFF025A10Sequence588010232 (6)780000372 (6)ref|XP_010656174.1|5e-30PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera]
JMFF032B20Sequence505010232 (6)660000372 (6)ref|XP_010656174.1|2e-30PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera]
JMFN046I21Sequence544000372 (6)ref|XP_010656172.1|9e-17PREDICTED: uncharacterized protein LOC100266157 isoform X1 [Vitis vinifera] emb
JMSF008N06Sequence371010232 (6)ref|XP_004239242.1|122PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum]745000372 (6)ref|XP_010656174.1|2e-57PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera]
JMSF010N15Sequence225010232 (6)ref|XP_004239242.1|77.4PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum]765000372 (6)ref|XP_010656172.1|8e-54PREDICTED: uncharacterized protein LOC100266157 isoform X1 [Vitis vinifera] emb

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008N06+ C
                      ____________________________________________________________
consensus C
 
. : . : . : . : . : . :
rJMSF008N06+ GGAGAGCTTTTCCAGAAAACCAAGTTAGCAGATGAAAACTCTGGAGGAGCAAAATATGAC
                      ____________________________________________________________
consensus GGAGAGCTTTTCCAGAAAACCAAGTTAGCAGATGAAAACTCTGGAGGAGCAAAATATGAC
 
. : . : . : . : . : . :
rJMSF008N06+ AGGGGCGAAAAACGTATGGACAAGGAACACGACAAATCTGCTGTGCACCTTGTGAAGAAA
                      ____________________________________________________________
consensus AGGGGCGAAAAACGTATGGACAAGGAACACGACAAATCTGCTGTGCACCTTGTGAAGAAA
 
. : . : . : . : . : . :
rJMSF008N06+ ATACTGAAGAAAGGAATGCCCCATGCCTCTTCCAAGAGCTCAACCGCAGCTTCTGGCTGT
                      ____________________________________________________________
consensus ATACTGAAGAAAGGAATGCCCCATGCCTCTTCCAAGAGCTCAACCGCAGCTTCTGGCTGT
 
. : . : . : . : . : . :
rJMSF008N06+ ACTATTGATTCTGCTGCTGCTGATTCAAAACTGCACAAGATCCTGAATATGTTCCACAGG
rJMFF032B20+ AGATCCTGAATATGTTCCACAGG
rJMSF010N15+ AGATCCTGAATATGTTCCACAGG
rJMFF008M13+ AGATCCTGAATATGTTCCACAGG
rJMFF025A10+ AGATCCTGAATATGTTCCACAGG
                      ____________________________________________________________
consensus ACTATTGATTCTGCTGCTGCTGATTCAAAACTGCACAAGATCCTGAATATGTTCCACAGG
 
. : . : . : . : . : . :
rJMSF008N06+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF032B20+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMSF010N15+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF008M13+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF025A10+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
JMFN046I21+ TGAG
                      ____________________________________________________________
consensus AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
 
. : . : . : . : . : . :
rJMSF008N06+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF032B20+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMSF010N15+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF008M13+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF025A10+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
JMFN046I21+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
                      ____________________________________________________________
consensus ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
 
. : . : . : . : . : . :
rJMSF008N06+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF032B20+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMSF010N15+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF008M13+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF025A10+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
JMFN046I21+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTTTGAAGAGCCAATCCAAC
                      ____________________________________________________________
consensus CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
 
. : . : . : . : . : . :
rJMSF008N06+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF032B20+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMSF010N15+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF008M13+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF025A10+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
JMFN046I21+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
                      ____________________________________________________________
consensus ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
 
. : . : . : . : . : . :
rJMSF008N06+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF032B20+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMSF010N15+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF008M13+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF025A10+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
JMFN046I21+ AGCGACGCAGACTACCTGGTTTTGGAGCTTTAAGACCAAGAACCGGAAACATCAGAAGCA
                      ____________________________________________________________
consensus AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
 
. : . : . : . : . : . :
rJMSF008N06+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF032B20+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMSF010N15+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF008M13+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF025A10+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
JMFN046I21+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
                      ____________________________________________________________
consensus GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
 
. : . : . : . : . : . :
rJMSF008N06+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF032B20+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMSF010N15+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF008M13+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF025A10+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
JMFN046I21+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
                      ____________________________________________________________
consensus TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
 
. : . : . : . : . : . :
rJMSF008N06+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF032B20+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMSF010N15+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF008M13+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF025A10+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
JMFN046I21+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
                      ____________________________________________________________
consensus AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
 
. : . : . : . : . : . :
rJMSF008N06+ TATGTAC
rJMFF032B20+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTAT
rJMSF010N15+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTAT
rJMFF008M13+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATT
rJMFF025A10+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
JMFN046I21+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
                      ____________________________________________________________
consensus TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
 
. : . : . : . : . : . :
JMFN046I21+ TGAGATATGAAGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCAGACTAGTTCTCTCTC
                      ____________________________________________________________
consensus TGAGATATGAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGACTAGTTCTCTCTC