| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008M13 | Sequence | 596 | 010232 (6) | ref|XP_004239242.1| | 81.3 | PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum] | 695 | 000372 (6) | ref|XP_010656174.1| | 2e-49 | PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera] |
| JMFF025A10 | Sequence | 588 | 010232 (6) | 780 | 000372 (6) | ref|XP_010656174.1| | 5e-30 | PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera] | |||
| JMFF032B20 | Sequence | 505 | 010232 (6) | 660 | 000372 (6) | ref|XP_010656174.1| | 2e-30 | PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera] | |||
| JMFN046I21 | Sequence | 544 | 000372 (6) | ref|XP_010656172.1| | 9e-17 | PREDICTED: uncharacterized protein LOC100266157 isoform X1 [Vitis vinifera] emb | |||||
| JMSF008N06 | Sequence | 371 | 010232 (6) | ref|XP_004239242.1| | 122 | PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum] | 745 | 000372 (6) | ref|XP_010656174.1| | 2e-57 | PREDICTED: uncharacterized protein LOC100266157 isoform X2 [Vitis vinifera] |
| JMSF010N15 | Sequence | 225 | 010232 (6) | ref|XP_004239242.1| | 77.4 | PREDICTED: uncharacterized protein LOC101252392 [Solanum lycopersicum] | 765 | 000372 (6) | ref|XP_010656172.1| | 8e-54 | PREDICTED: uncharacterized protein LOC100266157 isoform X1 [Vitis vinifera] emb |
This contig is upended
. : . : . : . : . : . :
rJMSF008N06+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
rJMSF008N06+ GGAGAGCTTTTCCAGAAAACCAAGTTAGCAGATGAAAACTCTGGAGGAGCAAAATATGAC
____________________________________________________________
consensus GGAGAGCTTTTCCAGAAAACCAAGTTAGCAGATGAAAACTCTGGAGGAGCAAAATATGAC
. : . : . : . : . : . :
rJMSF008N06+ AGGGGCGAAAAACGTATGGACAAGGAACACGACAAATCTGCTGTGCACCTTGTGAAGAAA
____________________________________________________________
consensus AGGGGCGAAAAACGTATGGACAAGGAACACGACAAATCTGCTGTGCACCTTGTGAAGAAA
. : . : . : . : . : . :
rJMSF008N06+ ATACTGAAGAAAGGAATGCCCCATGCCTCTTCCAAGAGCTCAACCGCAGCTTCTGGCTGT
____________________________________________________________
consensus ATACTGAAGAAAGGAATGCCCCATGCCTCTTCCAAGAGCTCAACCGCAGCTTCTGGCTGT
. : . : . : . : . : . :
rJMSF008N06+ ACTATTGATTCTGCTGCTGCTGATTCAAAACTGCACAAGATCCTGAATATGTTCCACAGG
rJMFF032B20+ AGATCCTGAATATGTTCCACAGG
rJMSF010N15+ AGATCCTGAATATGTTCCACAGG
rJMFF008M13+ AGATCCTGAATATGTTCCACAGG
rJMFF025A10+ AGATCCTGAATATGTTCCACAGG
____________________________________________________________
consensus ACTATTGATTCTGCTGCTGCTGATTCAAAACTGCACAAGATCCTGAATATGTTCCACAGG
. : . : . : . : . : . :
rJMSF008N06+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF032B20+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMSF010N15+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF008M13+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
rJMFF025A10+ AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
JMFN046I21+ TGAG
____________________________________________________________
consensus AAAGTCCATCCTGAGAGCACAACAACAGCAGAAAAGCTCGACAAGCCCTCCAAAAATGAG
. : . : . : . : . : . :
rJMSF008N06+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF032B20+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMSF010N15+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF008M13+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
rJMFF025A10+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
JMFN046I21+ ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
____________________________________________________________
consensus ATCAGGAACAATCTAATGTATGATGGGGCCTACAACCTTGGAGGTGCTGAAAATGTCGCC
. : . : . : . : . : . :
rJMSF008N06+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF032B20+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMSF010N15+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF008M13+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
rJMFF025A10+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
JMFN046I21+ CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTTTGAAGAGCCAATCCAAC
____________________________________________________________
consensus CTGATGCCTAAGCAACGCATGTCAAAGGAGAGCATAAGGCGTCTGAAGAGCCAATCCAAC
. : . : . : . : . : . :
rJMSF008N06+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF032B20+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMSF010N15+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF008M13+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
rJMFF025A10+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
JMFN046I21+ ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
____________________________________________________________
consensus ATGCATCAGTTCACCATTAGTGATCCTGATTGTAACGGGAACCGAGAATGCTGGATCAAA
. : . : . : . : . : . :
rJMSF008N06+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF032B20+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMSF010N15+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF008M13+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
rJMFF025A10+ AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
JMFN046I21+ AGCGACGCAGACTACCTGGTTTTGGAGCTTTAAGACCAAGAACCGGAAACATCAGAAGCA
____________________________________________________________
consensus AGCGACGCAGACTACCTGGTTTTGGAGCTCTAAGACCAAGAACCGGAAACATCAGAAGCA
. : . : . : . : . : . :
rJMSF008N06+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF032B20+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMSF010N15+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF008M13+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
rJMFF025A10+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
JMFN046I21+ GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
____________________________________________________________
consensus GCTCAGGTTCACTGCCAGCTAAACCTGCAACAATGTTTGGGTTAATGAAACTCTTCTCTA
. : . : . : . : . : . :
rJMSF008N06+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF032B20+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMSF010N15+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF008M13+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
rJMFF025A10+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
JMFN046I21+ TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
____________________________________________________________
consensus TACTAATATGTTTGAGTGATTGTGTCTTGACAAGGTTGAGAGAGAACTTTATAGCATCAT
. : . : . : . : . : . :
rJMSF008N06+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF032B20+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMSF010N15+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF008M13+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
rJMFF025A10+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
JMFN046I21+ AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
____________________________________________________________
consensus AATAAGAAATGTATTTAAGAGTGTCTTGTCTCTTTGATTTATGGTTATTATGAGTATTAT
. : . : . : . : . : . :
rJMSF008N06+ TATGTAC
rJMFF032B20+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTAT
rJMSF010N15+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTAT
rJMFF008M13+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATT
rJMFF025A10+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
JMFN046I21+ TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
____________________________________________________________
consensus TATGTACAAAGGTTTGAGATGTATGGACCAAGATGATCATGATTTATGCATTAAAGTATT
. : . : . : . : . : . :
JMFN046I21+ TGAGATATGAAGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCAGACTAGTTCTCTCTC
____________________________________________________________
consensus TGAGATATGAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGACTAGTTCTCTCTC