Contig 000360:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS087G07+                                                                      A
JMFN020M15+                                                                      A
rJMFF034H17-                                             TAGAGTTCCATGCACGTCCTAAGAA
                      ____________________________________________________________
consensus                                                TAGAGTTCCATGCACGTCCTAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087G07+           ACATAAGATGACATCTCATTGTGTCTTTAGAAGATGAAAAGAAGGTTGTCGGAACAAACT
JMFN020M15+           ACATAAGATGACATCTCATTGTGTCTTTAGAAGATGAAAAGAAGGTTGTCGGAACAAACT
rJMFF034H17-          ACATAAGATGACATCTCATTGTGTCTTTAGAAGATGAAAAGAAGGTTGTCGGAACAAACT
                      ____________________________________________________________
consensus             ACATAAGATGACATCTCATTGTGTCTTTAGAAGATGAAAAGAAGGTTGTCGGAACAAACT
 
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JMFS087G07+           CTAAATCATCATCTCACAACACAAGTTTTCACCTACTTTACCTTATTCATGGCTGGCTAG
JMFN020M15+           CTAAATCATCATCTCACAACACAAGTTTTCACCTACTTTACCTTATTCATGGCTGGCTAG
rJMFF034H17-          CTAAATCATCATCTCACAACACAAGTTTTCACCTACTTTACCTTATTCATGGCTGGCTAG
                      ____________________________________________________________
consensus             CTAAATCATCATCTCACAACACAAGTTTTCACCTACTTTACCTTATTCATGGCTGGCTAG
 
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JMFS087G07+           CCCTAAGCACTAGCTGGCAGAGTGTCACGGCTCATGCAATTTTTTATGGCAATCATAAAA
JMFN020M15+           CCCTAAGCACTAGCTGGCAGAGTGTCACGGCTCATGCAATTTTTTATGGCAATCATAAAA
rJMFF034H17-          CCCTAAGCACTAGCTGGCAGAGTGTCACGGCTCATGCAATTTTTTATGGCAATCATAAAA
JMFS057H02+                                      CGGCTCATGCAATTTTNTATGGCAATCATAAAA
                      ____________________________________________________________
consensus             CCCTAAGCACTAGCTGGCAGAGTGTCACGGCTCATGCAATTTTTTATGGCAATCATAAAA
 
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JMFS087G07+           CATTACAAATCGGAAACAACAACAACTAGGTGCTGCAGCAAAGTCGCATGCGCATGGAAC
JMFN020M15+           CATTACAAATCGGAAACAACAACAACTAGGTGCTGCAGCAAAGTCGCATGCGCATGGAAC
rJMFF034H17-          CATTACAAATCGGAAACAACAACAACTAGGTGCTGCAGCAAAGTCGCATGCGCATGGAAC
JMFS057H02+           CATTACAAATCGGAAACAACAACAACTAGGTGCTGCAGCAAAGTCGCATGCGCATGGAAC
                      ____________________________________________________________
consensus             CATTACAAATCGGAAACAACAACAACTAGGTGCTGCAGCAAAGTCGCATGCGCATGGAAC
 
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JMFS087G07+           AAATAGTTTTACTTCTACACGATGAATCACAGTACTTACCAGTGGTGCGTTTGGCGTTGA
JMFN020M15+           AAATAGTTTTACTTCTACACGATGAATCACAGTACTTACCAGTGGTGCGTTTGGCGTTGA
rJMFF034H17-          AAATAGTTTTACTTCTACACGATGAATCACAGTACTTACCAGTGGTGCGTTTGGCGTTGA
JMFS057H02+           AAATAGTTTTACTTCTACACGATGAATCACAGTACTTACCAGTGGTGCGTTTGGCGTTGA
                      ____________________________________________________________
consensus             AAATAGTTTTACTTCTACACGATGAATCACAGTACTTACCAGTGGTGCGTTTGGCGTTGA
 
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JMFS087G07+           TCGGGGAAGGGAGAGTAGCTGGTTGCTTCGGGTTCGGGTTCAGATTAGAGGTTTGGCGGG
JMFN020M15+           TCGGGGAAGGGAGAGTAGCTGGTTGCTTCGGGTTCGGGTTCAGATTAGAGGTTTGGCGGG
rJMFF034H17-          TCGGGGAAGGGAGAGTAGCTGGTTGCTTCGGGTTCGGGTTCAGATTAGAGGTTTGGCGGG
JMFS057H02+           TCGGGGAAGGGAGAGTAGCTGGTTGCTTCGGGTTCGGGTTCAGATTAGAGGTTTGGCGGG
                      ____________________________________________________________
consensus             TCGGGGAAGGGAGAGTAGCTGGTTGCTTCGGGTTCGGGTTCAGATTAGAGGTTTGGCGGG
 
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JMFS087G07+           TAGTCCTTCCTAGCATCCAAACCAGACTGTTGGGAACCCATGGTGCTGTAAGTTGGTAAC
JMFN020M15+           TAGTCCTTCCTAGCATCCAAACCAGACTGTTGGGAACCCATGGTGCTGTAAGTTGGTAAC
rJMFF034H17-          TAGTCCTTCCTAGCATCCAAACCAGACTGTTGGGAACCCATGGTGCTGTAAGTTGGTAAC
JMFS057H02+           TAGTCATTCCTAGCATCCAAACCAGACTGTTGGGAACCCATGGTGCTGTAAGTTGGTAAC
JMFS097G05+                                         TGGGAACCCATGGTGCTGTAAGTTGGTAAC
                      ____________________________________________________________
consensus             TAGTCCTTCCTAGCATCCAAACCAGACTGTTGGGAACCCATGGTGCTGTAAGTTGGTAAC
 
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JMFS087G07+           CCGAATCCCGGGGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
JMFN020M15+           CCGAATCCCGGAGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
rJMFF034H17-          CCGAATCCCGGGGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
JMFS057H02+           CCGAATCCCGGGGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
JMFS097G05+           CCGAATCCCGGGGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
                      ____________________________________________________________
consensus             CCGAATCCCGGGGGCAAGAGAGGTGAGTTCATTGGTGATTGTGACCCTGCTGACACTTGC
 
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JMFS087G07+           TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
JMFN020M15+           TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAAGGGCGTGATGAATCAAA
rJMFF034H17-          TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
JMFS057H02+           TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
JMFS097G05+           TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
JMFN006O10+                 AGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
                      ____________________________________________________________
consensus             TTCTCTAGTGAACCAGAATGGGGTGAAGGATCGTTTGGATGAA-GGCGTGATGAATCAAA
 
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JMFS087G07+           TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGA                    
JMFN020M15+           TACAGGGA                                                    
rJMFF034H17-          TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGAGCGTCGAATTGCTGCTGCTG
JMFS057H02+           TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGAGCGTCGAATTGCTGCTGCTG
JMFS097G05+           TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGAGCGTCGAATTGCTGCTGCTG
JMFN006O10+           TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGAGCGTCGAATTGCTGCTGCTG
                      ____________________________________________________________
consensus             TACAGGGAGTTTGAAGCATCTGTCGCCCTGTGTGTAAGGAGCGTCGAATTGCTGCTGCTG
 
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rJMFF034H17-          CTGCTGCTGCTGATGGGCACC                                       
JMFS057H02+           CTGCTGCTGCTGATGGGCACCTCGTGGGTGGTGGTCCTGAGGATTCTCGGCTGACATTCC
JMFS097G05+           CTGCTGCTGCTGATGGGCACCTCGTGGGTGGTGGTCCTGAGGATTCTCGGCTGACATTCC
JMFN006O10+           CTGCTGCTGCTGATGGGCACCTCGTGGGTGGTGGTCCTGAGGATTCTCGGCTGACATTCC
                      ____________________________________________________________
consensus             CTGCTGCTGCTGATGGGCACCTCGTGGGTGGTGGTCCTGAGGATTCTCGGCTGACATTCC
 
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JMFS057H02+           ACCTGTAAGGGTTTTCAGTGCGAAATCTAAACACGGGTCTGACCAACATTCCCCGCTGCG
JMFS097G05+           ACCTGTAAGGGTTTTCAGTGCGAAATCTAAACACGGGTCTGACCAACATTCCCCGCTGCG
JMFN006O10+           ACCTGTAAGGGTTTTCAGTGCGAAATCTAAACACGGGTCTGACCAACATTCCCCGCTGCG
                      ____________________________________________________________
consensus             ACCTGTAAGGGTTTTCAGTGCGAAATCTAAACACGGGTCTGACCAACATTCCCCGCTGCG
 
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JMFS057H02+           ATACTGTGGTTGTGGGTTTGGCACTGGCAGTGGTAAGTTCATGTCAACATCATC      
JMFS097G05+           ATACTGTGGTTGTGGGTTTGGCACTGGCAGTGGTAAGTTCATGTCAACATCATCGTCGTG
JMFN006O10+           ATACTGTGGTTGTGGGTTTGGCACTGGCAGTGGTAAGTTCATGTCAACATCATCGTCGTG
                      ____________________________________________________________
consensus             ATACTGTGGTTGTGGGTTTGGCACTGGCAGTGGTAAGTTCATGTCAACATCATCGTCGTG
 
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JMFS097G05+           TGGTCCAACCACTTGCTTCCCTGGAATGCCCCGGTTCTCTGATGGAGGGAATAAAGGGTC
JMFN006O10+           TGGTCCAACCACTTGCTTCCCTGGAATGCCCCGGTTCTCTGATGGAGGGAATAAAGGGTC
                      ____________________________________________________________
consensus             TGGTCCAACCACTTGCTTCCCTGGAATGCCCCGGTTCTCTGATGGAGGGAATAAAGGGTC
 
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JMFS097G05+           GTCGCCTAGGCAGTCGTGATAAACCTCGGTTATTGGCTTATTAGCATCAA          
JMFN006O10+           GTCGCCTAGGCAGTCGTGATAAACCTCGGTTATTGGCTTATTAGCATCAAAGTGCTGAGG
                      ____________________________________________________________
consensus             GTCGCCTAGGCAGTCGTGATAAACCTCGGTTATTGGCTTATTAGCATCAAAGTGCTGAGG
 
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JMFN006O10+           AACTTTCTGAGCTGGATTGGTGGGGATAGGGGCCAGAGATGTATTCACATCAATTCCGCT
JMFN037F01+                                GGGGATAGGGGCCAGAGATGTATTCACATCAATTCCGCT
                      ____________________________________________________________
consensus             AACTTTCTGAGCTGGATTGGTGGGGATAGGGGCCAGAGATGTATTCACATCAATTCCGCT
 
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JMFN006O10+           AGTGTTGTTCATAACAGAACCTTGA                                   
JMFF034H17+                                             TCGCCAAGACCCAAATCGGCTACCAC
JMFN037F01+           AGTGTTGTTCATAACAGAACCTTGAAGAATCTCTTCGCCAAGACCCAAATCGGCTACCAC
                      ____________________________________________________________
consensus             AGTGTTGTTCATAACAGAACCTTGAAGAATCTCTTCGCCAAGACCCAAATCGGCTACCAC
 
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JMFF034H17+           TTTCTGAACCGGATCATTGGGTCCCCACGATGTATTGATATCGATTCCACCAGAGTTTGG
JMFN037F01+           TTTCTGAACCGGATCATTGGGTCCCCACGATGTATTGATATCGATTCCACCAGAGTTTGG
                      ____________________________________________________________
consensus             TTTCTGAACCGGATCATTGGGTCCCCACGATGTATTGATATCGATTCCACCAGAGTTTGG
 
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JMFF034H17+           GATAGCAGTTTGAAAAGCATGTTCCCCAAAACCCAGTTTTGGAGCTGGATCACTGGAAGG
JMFN037F01+           GATAGCAGTTTGAAAAGCATGTTCCCCAAAACCCAGTTTTGGAGCTGGATCACTGGAAGG
                      ____________________________________________________________
consensus             GATAGCAGTTTGAAAAGCATGTTCCCCAAAACCCAGTTTTGGAGCTGGATCACTGGAAGG
 
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JMFF034H17+           TGGAGTGAGAGATGTATTATTGGCCTCATTTCCACTGGAGTTCACAATACCAGCTTGAAG
JMFN037F01+           TGGAGTGAGAGATGTATTATTGGCCTCATTTCCACTGGAGTTCACAATACCAGCTTGAAG
                      ____________________________________________________________
consensus             TGGAGTGAGAGATGTATTATTGGCCTCATTTCCACTGGAGTTCACAATACCAGCTTGAAG
 
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JMFF034H17+           AGTAGCCCCCCCATCATTAAGACCCAAATTGGTTTCCACTTCTTGTTTGCTCTGCGCAAG
JMFN037F01+           AGTAGCCCCCCCATCATTAAGACCCAAATTGGTTTCCACTTCTTGTTTGCTCTGCGCAAG
                      ____________________________________________________________
consensus             AGTAGCCCCCCCATCATTAAGACCCAAATTGGTTTCCACTTCTTGTTTGCTCTGCGCAAG
 
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JMFF034H17+           TCTTTTTGAGGTCCGACCTCCCGGCACACTCGCACTCGGAGCTTTGGTTTTCCTGGGCTG
JMFN037F01+           TCTTTTTGAGGTCCGACCTCCCGGCACACTCGCACTCGGAGCTTTGGTTTTCCTGGGCTG
                      ____________________________________________________________
consensus             TCTTTTTGAGGTCCGACCTCCCGGCACACTCGCACTCGGAGCTTTGGTTTTCCTGGGCTG
 
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JMFF034H17+           TCTTGTCTTTGTGGACTGAGGAGCAGAAGCAACTGCAGCGTCTCCATTTAAGGCAGGTTT
JMFN037F01+           TCTTGTCTTTGTGGACTGAGGAGCAGAAGCAACTGCAGCGTCTCCATTTAAGGCAGGTTT
                      ____________________________________________________________
consensus             TCTTGTCTTTGTGGACTGAGGAGCAGAAGCAACTGCAGCGTCTCCATTTAAGGCAGGTTT
 
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JMFF034H17+           TGCACGTGATTTCGTTGCAGAAGCTCTTCGGCGTGGAGTTTTAACGGTATTTACTTCAGC
JMFN037F01+           TGCACGTGATTTCGTTGCAGAAGCTCTTCGGCGTGGAGTTTTAACGGTATTTACTTCAGC
                      ____________________________________________________________
consensus             TGCACGTGATTTCGTTGCAGAAGCTCTTCGGCGTGGAGTTTTAACGGTATTTACTTCAGC
 
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JMFF034H17+           CCCCGGGCTTGCGTTAATGAAATCTTCAGTAATGCTGCGCCGTCTTTTGTTCGA      
JMFN037F01+           CCCCGGGCTTGCGTTAATGAAATCTTCAGTAATGCTGCGCCGTCTTTTGTTCGACCCCTC
                      ____________________________________________________________
consensus             CCCCGGGCTTGCGTTAATGAAATCTTCAGTAATGCTGCGCCGTCTTTTGTTCGACCCCTC