Contig 000358:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+                                                       CCGGCTTCCTGAATCT
                      ____________________________________________________________
consensus                                                         CCGGCTTCCTGAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           TACTTGNTCGATTCCAGCAAAGAAGAAGTTGCTACGGGAGCCTCCTACTTCGGGTTGCAG
JMFN034N02+                  TCGATTCCAGCAAAGAAGAAGTTGCTACGGGAGCCTCCTACTTCGGGTTGCAG
                      ____________________________________________________________
consensus             TACTTGNTCGATTCCAGCAAAGAAGAAGTTGCTACGGGAGCCTCCTACTTCGGGTTGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           CATGACTATCCCGCCAACTTGGGCCAGTGCCTCAATCATGAGAACACCAGGCATGATTGG
JMFN034N02+           CATGACTATCCCGCCAACTTGGGCCAGTGCCTCAATCATGAGAACACCAGGCATGATTGG
                      ____________________________________________________________
consensus             CATGACTATCCCGCCAACTTGGGCCAGTGCCTCAATCATGAGAACACCAGGCATGATTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           CCTCCCCGGAAAGTGTCCGTTGAAGAACTGGTCGTTAATAGTAACATTCTTGATTCCAAC
JMFN034N02+           CCTCCCCGGAAAGTGTCCGTTGAAGAACTGGTCGTTAATAGTAACATTCTTGATTCCAAC
                      ____________________________________________________________
consensus             CCTCCCCGGAAAGTGTCCGTTGAAGAACTGGTCGTTAATAGTAACATTCTTGATTCCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           CGCTGAAAGTCCCGGATTGTACTCAATCACTCTATCCACCAGCAAAAATGGATAACGGTG
JMFN034N02+           CGCTGAAACTCCCGGATTGTACTCAATCACTCTATCCACCAGCAAAAATGGATAACGGTG
                      ____________________________________________________________
consensus             CGCTGAAAGTCCCGGATTGTACTCAATCACTCTATCCACCAGCAAAAATGGATAACGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           AGGTAGAATATCCATAATCTGATTGATATCCACCACAGACGGAAATGAAGGGTAACTCAA
JMFN034N02+           AGGTAGAATATCCATAATCTGATTGATATCCACCACAGACGGAAATGAAGGGTAACTCAA
                      ____________________________________________________________
consensus             AGGTAGAATATCCATAATCTGATTGATATCCACCACAGACGGAAATGAAGGGTAACTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           TTCAATAGGGGTCTCGGGGGTTTTGGTGGCCGATTCATTTGCAGTACATTTGGTGACGAA
JMFN034N02+           TTCAATAGGGGTCTCGGGGGTTTTGGTGGCCGATTCATTTGCAGTACATTTGGTGACGAA
                      ____________________________________________________________
consensus             TTCAATAGGGGTCTCGGGGGTTTTGGTGGCCGATTCATTTGCAGTACATTTGGTGACGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           ACTAGGCCGGGTTTTATCGCATTGGGTCGACAAGGGGTGAGATTTGAAGGGCAGCGAGCG
JMFN034N02+           ACTAGGCCGGGTTTTATCGCATTGGGTCGACAAGGGGTGAGATTTGAAGGGCAGCGAGCG
                      ____________________________________________________________
consensus             ACTAGGCCGGGTTTTATCGCATTGGGTCGACAAGGGGTGAGATTTGAAGGGCAGCGAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           ATTCAACGAGAGGGAAGAAGCATTGTCGAGGGTCTTGTGAGAAGCGGCAGAGTGGGGAGT
JMFN034N02+           ATTCAACGAGAGGGAAGAAGCATTGTCGAGGGTCTTGTGAGAAGCGGCAGAGTGGGGAGT
                      ____________________________________________________________
consensus             ATTCAACGAGAGGGAAGAAGCATTGTCGAGGGTCTTGTGAGAAGCGGCAGAGTGGGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           GAGAGTGGAGAAAAAAGACTGTGAGAGAGCAGTAGACGCCATTTCTGATAGCTCTCAAAG
JMFN034N02+           GAGAGTGGAGAAAAAAGACTGTGAGAGAGCAGTAGACGCCATTTCTGATAGCTCTCAAAG
                      ____________________________________________________________
consensus             GAGAGTGGAGAAAAAAGACTGTGAGAGAGCAGTAGACGCCATTTCTGATAGCTCTCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018F11+           CTGCGTCTTTGAATGGGGTGAAGA                                    
JMFN034N02+           CTGCGTCTTTGAATGGGGTGAAGAGATTGAACGCAGACTGGTAAAGAAAGAGAGGTACGG
                      ____________________________________________________________
consensus             CTGCGTCTTTGAATGGGGTGAAGAGATTGAACGCAGACTGGTAAAGAAAGAGAGGTACGG