Contig 000351:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009E13Sequence618000351 (2)gb|AHX56186.1|4e-118cinnamoyl-CoA reductase 1 [Petunia x hybrida]
JMFN032J08Sequence618000351 (2)emb|CDO98223.1|2e-116unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN009E13+                        CATAAGTTTTAGCAGAGCCAGTGAGGTACTTGAGGATGTGAAGAATG
JMFN032J08+                                                     TTGAGGATGTGAAGAATG
                      ____________________________________________________________
consensus                          CATAAGTTTTAGCAGAGCCAGTGAGGTACTTGAGGATGTGAAGAATG
 
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JMFN009E13+           CTAGCATTGACTGTGGTTTGTAGCAATGGCCCAAGCACCAAAACTGGATTTATCACCACT
JMFN032J08+           CTAGCATTGACTGTGGTTTGTAGCAATGGCCCAAGCACCAAAACTGGATTTATCACCACT
                      ____________________________________________________________
consensus             CTAGCATTGACTGTGGTTTGTAGCAATGGCCCAAGCACCAAAACTGGATTTATCACCACT
 
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JMFN009E13+           AAATCAACCCCTCTCTCCTTTGCTTCTTCCCATGCTTTTTTCTCTGCCACCATCTTCCCA
JMFN032J08+           AAATCAACCCCTCTCTCCTTTGCTTCTTCCCATGCTTTTTTCTCTGCCACCATCTTCCCA
                      ____________________________________________________________
consensus             AAATCAACCCCTCTCTCCTTTGCTTCTTCCCATGCTTTTTTCTCTGCCACCATCTTCCCA
 
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JMFN009E13+           TAACAATACCAATTCTTAGTGTTCTTGCAAAACTCAAGATCACTCCAACAAGTTTCATCC
JMFN032J08+           TAACAATACCAATTCTTAGTGTTCTTGCAAAACTCAAGATCACTCCAACAAGTTTCATCC
                      ____________________________________________________________
consensus             TAACAATACCAATTCTTAGTGTTCTTGCAAAACTCAAGATCACTCCAACAAGTTTCATCC
 
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JMFN009E13+           ACAATTTCATCAGGGCCTCTGTTGGGGTCCATGTAGACCGCACCAATGGAGGAAGTGAAC
JMFN032J08+           ACAATTTCATCAGGGCCTCTGTTGGGGTCCATGTAGACCGCACCAATGGAGGAAGTGAAC
                      ____________________________________________________________
consensus             ACAATTTCATCAGGGCCTCTGTTGGGGTCCATGTAGACCGCACCAATGGAGGAAGTGAAC
 
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JMFN009E13+           ACCACGCGGCGAACTCCGGCTTCCGCCGCCGCCGCTATCACGTTCTTGGTTCCGATCACC
JMFN032J08+           ACCACGCGGCGAACTCCGGCTTCCGCCGCCGCCGCTATCACGTTCTTGGTTCCGATCACC
                      ____________________________________________________________
consensus             ACCACGCGGCGAACTCCGGCTTCCGCCGCCGCCGCTATCACGTTCTTGGTTCCGATCACC
 
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JMFN009E13+           GCCGGCTCCACCATTTGTTCAGGATCATCCGTTACAGGCGAAGCGGTGTGGAAAACTCCA
JMFN032J08+           GCCGGCTCCACCATTTGTTCAGGATCATCCGTTACAGGCGAAGCGGTGTGGAAAACTCCA
                      ____________________________________________________________
consensus             GCCGGCTCCACCATTTGTTCAGGATCATCCGTTACAGGCGAAGCGGTGTGGAAAACTCCA
 
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JMFN009E13+           TCGCAGCCGTTGATGGCTTCGCCCATGCTCTTGTAATCAAGAAGGTCCGCCTTCCAAAGT
JMFN032J08+           TCGCAGCCGTTGATGGCTTCGCCCATGCTCTTGTAATCAAGAAGGTCCGCCTTCCAAAGT
                      ____________________________________________________________
consensus             TCGCAGCCGTTGATGGCTTCGCCCATGCTCTTGTAATCAAGAAGGTCCGCCTTCCAAAGT
 
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JMFN009E13+           GTTAACCTTTCATTTGCTCCTTCAAGCTTCTTTAGGTGACCATTCTTTTCATCATCTGGG
JMFN032J08+           GTTAACCTTTCATTTGCTCCTTCAAGCTTCTTTAGGTGACCATTCTTTTCATCATCTGGG
                      ____________________________________________________________
consensus             GTTAACCTTTCATTTGCTCCTTCAAGCTTCTTTAGGTGACCATTCTTTTCATCATCTGGG
 
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JMFN009E13+           TTTCTGACGGTTCCTCGGACGGTGTAGCCTTTCTGGAGGAGAAGTTTAACGAGCCAGGAA
JMFN032J08+           TTTCTGACGGTTCCTCGGACGGTGTAGCCTTTCTGGAGGAGAAGTTTAACGAGCCAGGAA
                      ____________________________________________________________
consensus             TTTCTGACGGTTCCTCGGACGGTGTAGCCTTTCTGGAGGAGAAGTTTAACGAGCCAGGAA
 
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JMFN009E13+           GCGATGAAGCCTCCGGCGCCGGTGACGCAGA                             
JMFN032J08+           GCGATGAAGCCTCCGGCGCCGGTGACGCAGACGACTTGGCCGGAAATCGACGGCATGGTT
                      ____________________________________________________________
consensus             GCGATGAAGCCTCCGGCGCCGGTGACGCAGACGACTTGGCCGGAAATCGACGGCATGGTT