Contig 000349:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014L06Sequence517012855 (20)ref|XP_009590106.1|6e-16PREDICTED: ubiquitin-activating enzyme E1 1-like isoform X1 [Nicotiana tomentos807000349 (4)gb|KDO67000.1|5e-141hypothetical protein CISIN_1g001074mg [Citrus sinensis] gb|KDO67001.1| hypotheti
JMFN030G17Sequence541000349 (4)ref|XP_009590107.1|1e-74PREDICTED: ubiquitin-activating enzyme E1 1-like isoform X2 [Nicotiana tomentos
JMSF003O02Sequence381012855 (20)ref|XP_009802174.1|3e-18PREDICTED: ubiquitin-activating enzyme E1 1 isoform X1 [Nicotiana sylvestris]813000349 (4)gb|KDO67000.1|3e-144hypothetical protein CISIN_1g001074mg [Citrus sinensis] gb|KDO67001.1| hypotheti
JMSF029F24Sequence619012855 (20)ref|XP_009802174.1|4e-68PREDICTED: ubiquitin-activating enzyme E1 1 isoform X1 [Nicotiana sylvestris]721000349 (4)gb|KDO67000.1|1e-124hypothetical protein CISIN_1g001074mg [Citrus sinensis] gb|KDO67001.1| hypotheti

Alignment

This contig is upended


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rJMSF003O02+                                                    TGTGAAAATTGAGACTGA
                      ____________________________________________________________
consensus                                                       TGTGAAAATTGAGACTGA
 
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rJMSF003O02+          TGAGNAGGCCATCAGTCTTACTGCTTCGTCAATAGATGATGCTGCAGTTATCAATGAACT
rJMFF014L06+                          CTTACTGCTTCGTCAATAGATGATGCTGCAGTTATCAATGAACT
                      ____________________________________________________________
consensus             TGAGNAGGCCATCAGTCTTACTGCTTCGTCAATAGATGATGCTGCAGTTATCAATGAACT
 
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rJMSF003O02+          AATAATGAAGGTGGAACAGTGTAGGAAGAATCTACCTCCAAACTTCAGGATGAAACCTAT
rJMSF029F24+                                                  AACTTCAGGATGAAACCTAT
rJMFF014L06+          AATAATGAAGGTGGAACAGTGTAGGAAGAATCTACCTCCAAACTTCAGGATGAAACCTAT
                      ____________________________________________________________
consensus             AATAATGAAGGTGGAACAGTGTAGGAAGAATCTACCTCCAAACTTCAGGATGAAACCTAT
 
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rJMSF003O02+          TCAATTTGAGAAGGATGATGACACAAATTACCATATGGATATGATTGCTGGGCTTGCTAA
rJMSF029F24+          TCAATTTGAGAAGGATGATGACACAAATTACCATATGGATATGATTGCTGGGCTTGCTAA
rJMFF014L06+          TCAATTTGAGAAGGATGATGACACAAATTACCATATGGATATGATTGCTGGGCTTGCTAA
                      ____________________________________________________________
consensus             TCAATTTGAGAAGGATGATGACACAAATTACCATATGGATATGATTGCTGGGCTTGCTAA
 
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rJMSF003O02+          TATGAGGGCTAGAAACTACAGTATACCAGAAGTAGACAAGCTGAAAGCCAAATTTATTGC
rJMSF029F24+          TATGAGGGCTAGAAACTACAGTATACCAGAAGTAGACAAGCTGAAAGCCAAATTTATTGC
rJMFF014L06+          TATGAGGGCTAGAAACTACAGTATACCAGAAGTAGACAAGCTGAAAGCCAAATTTATTGC
                      ____________________________________________________________
consensus             TATGAGGGCTAGAAACTACAGTATACCAGAAGTAGACAAGCTGAAAGCCAAATTTATTGC
 
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rJMSF003O02+          TGGTAGGATTATTCCTGCAATTGCAACCTCTACTGCAATGGCTACTGGCTTGGTTTGCCT
rJMSF029F24+          TGGTAGGATTATTCCTGCAATTGCAACCTCTACTGCAATGGCTACTGGCTTGGTTTGCCT
rJMFF014L06+          TGGTAGGATTATTCCTGCAATTGCAACCTCTACTGCAATGGCTACTGGCTTGGTTTGCCT
JMFN030G17-                                                                      T
                      ____________________________________________________________
consensus             TGGTAGGATTATTCCTGCAATTGCAACCTCTACTGCAATGGCTACTGGCTTGGTTTGCCT
 
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rJMSF003O02+          TGAGCTATACAAGGTTCTAGGAGAGGGGCACAAAGTGGAGGACTATCGCAACACATTTGC
rJMSF029F24+          TGAGCTGTACAAGGTTCTAGGAGAGGGGCACAAAGTGGAGGACTATCGCAACACATTTGC
rJMFF014L06+          TGAGCTGTACAAGGTTCTAGGAGAGGGGCACAAAGTGGAGGACTATCGCAACACATTTGC
JMFN030G17-           TGAGCTGTACAAGGTTCTAGGAGAGGGGCACAAAGTGGAGGACTATCGCAACACATTTGC
                      ____________________________________________________________
consensus             TGAGCTGTACAAGGTTCTAGGAGAGGGGCACAAAGTGGAGGACTATCGCAACACATTTGC
 
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rJMSF003O02+          TAACCTTGCACTTCCTCTGTTTTCCATGGCCGAACCTGTCCCCCCGAAGGTTATCAAGCA
rJMSF029F24+          TAACCTTGCACTTCCTCTGTTTTCCATGGCCGAACCTGTCCCCCCGAAGGTTATCAAGCA
rJMFF014L06+          TAACCTTGCACTTCCTCTGTTTTCCATGGCCGAACCTGTCCCCCCGAAGGTTATCAAGCA
JMFN030G17-           TAACCTTGCACTTCCTCTGTTTTCCATGGCCGAACCTGTCCCCCCGAAGGTTATCAAGCA
                      ____________________________________________________________
consensus             TAACCTTGCACTTCCTCTGTTTTCCATGGCCGAACCTGTCCCCCCGAAGGTTATCAAGCA
 
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rJMSF003O02+          CAAGGATATGAGCTGGACTGTTTGGGATAGATGGATTATTAAGGACAACCCTACACTGAA
rJMSF029F24+          CAAGGATATGAGCTGGACTGTTTGGGATAGATGGATTATTAAGGACAACCCTACACTGAA
rJMFF014L06+          CAAGGATATGAGCTGGACTGTTTGGGATAGATGGATTATTAAGGACAACCCTACACTGAA
JMFN030G17-           CAAGGATATGAGCTGGACTGTTTGGGATAGATGGATTATTAAGGACAACCCTACACTGAA
                      ____________________________________________________________
consensus             CAAGGATATGAGCTGGACTGTTTGGGATAGATGGATTATTAAGGACAACCCTACACTGAA
 
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rJMSF003O02+          GGAGCTTATCCAATGGCTTGCAGACAAGGGCCTGAATGCCTACAGCATTTCATGTGGAAG
rJMSF029F24+          GGAGCTTATCCAATGGCTTGCAGACAAGGGCCTGAATGCCTACAGCATTTCATGTGGAAG
rJMFF014L06+          GGAGCTTATCCAATGGCTTGCAGACAAGGGCCTGAATGCCTACAGCATTTCATGTGGAAG
JMFN030G17-           GGAGCTTATCCAATGGCTTGCAGACAAGGGCCTGAATGCCTACAGCATTTCATGTGGAAG
                      ____________________________________________________________
consensus             GGAGCTTATCCAATGGCTTGCAGACAAGGGCCTGAATGCCTACAGCATTTCATGTGGAAG
 
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rJMSF003O02+          CTGCCTGCTTTTCAACAGCATGTTTCCGAGGCACAGGGACCGAATGGACAAGAAAGTAGT
rJMSF029F24+          CTGCCTGCTTTTCAACAGCATGTTTCCGAGGCACAGGGACCGAATGGACAAGAAAGTAGT
rJMFF014L06+          CTGCCTGCTTTTCAACAGCATGTTTCCGAGGCACAGGGACCGAATGGACAAGAAAGTAGT
JMFN030G17-           CTGCCTGCTTTTCAACAGCATGTTTCCGAGGCACAGGGACCGAATGGACAAGAAAGTAGT
                      ____________________________________________________________
consensus             CTGCCTGCTTTTCAACAGCATGTTTCCGAGGCACAGGGACCGAATGGACAAGAAAGTAGT
 
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rJMSF003O02+          GGATTTGGCAAGGGAGGTCGCCAAGGTGGAGTTGCCGCCATATCGTCGGTACTTGGATGT
rJMSF029F24+          GGATTTGGCAAGGGAGGTCGCCAAGGTGGAGTTGCCGCCATATCGTCGGCACTTGGATGT
rJMFF014L06+          GGATTTGGCAAGGGAGGTCGCCAAGGTGGAGTTGCCGCCATATCGTCGGCACTTGGATGT
JMFN030G17-           GGATTTGGCAAGGGAGGTCGCCAAGGTGGAGTTGCCGCCATATCGTCGGCACTTGGATGT
                      ____________________________________________________________
consensus             GGATTTGGCAAGGGAGGTCGCCAAGGTGGAGTTGCCGCCATATCGTCGGCACTTGGATGT
 
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rJMSF003O02+          CGTGGTTGCGTGTGAGGATGATGATGATAATGACATAGACATCCCTCTCGTATCTGTTTA
rJMSF029F24+          CGTGGTTGCGTGTGAGGATGATGATGATAATGACATAGACATCCCTCTCGTATCTGTTTA
rJMFF014L06+          CGTGGTTGCGTGTGAGGATGATGATGATAATGACATAGACATCCCTCTCGTATCTGTTTA
JMFN030G17-           CGTGGTTGCGTGTGAGGATGATGATGATAATGACATAGACATCCCTCTCGTATCTGTTTA
                      ____________________________________________________________
consensus             CGTGGTTGCGTGTGAGGATGATGATGATAATGACATAGACATCCCTCTCGTATCTGTTTA
 
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rJMSF003O02+          CTTCTGATAGAGCTCTTTGTATGTTCCCCTGCCATCCATCTTTCCCCGTACTTTGGGGCA
rJMSF029F24+          CTTCTGATAGAGCTCTTTGTATGTTCCCCTGCCATCCATCTTTCCCCGTACTTTGGGGCA
rJMFF014L06+          CTTCTGATAGAGCTCTTTGTATGTTCCCCTGCCATCCATCTTTCCCCGTACTTTGGGGCA
JMFN030G17-           CTTCTGATAGAGCTCTTTGTATGTTCCCCTGCCATCCATCTTTCCCCGTACTTTGGGGCA
                      ____________________________________________________________
consensus             CTTCTGATAGAGCTCTTTGTATGTTCCCCTGCCATCCATCTTTCCCCGTACTTTGGGGCA
 
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rJMSF003O02+          CGTATC                                                      
rJMSF029F24+          CGTATCAGTGACTTTCTACTACTGACTTTTATGCAGAT                      
rJMFF014L06+          CGTATCAGTGACTTTCTACTACTGACTTTTATGCAGAT                      
JMFN030G17-           CGTATCAGTGACTTTCTACTACTGACTTTTATGCAGATTGACTGTCTTTTTTGAGTACTT
                      ____________________________________________________________
consensus             CGTATCAGTGACTTTCTACTACTGACTTTTATGCAGATTGACTGTCTTTTTTGAGTACTT