Contig 000343:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035P10-                                                   ATTCTTCACAATAAATCAA
rJMFF040M04-                                                            AATAAATCAA
                      ____________________________________________________________
consensus                                                      ATTCTTCACAATAAATCAA
 
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rJMFF035P10-          GAGTAATTATACAACAACATACATGATGGTAATAATCACCACAGCCAACATTTAGGAAAT
rJMFF040M04-          GAGTAATTATACAACAACATACATGATGGTAATAATCACCACAGCCAACATTTAGGAAAT
                      ____________________________________________________________
consensus             GAGTAATTATACAACAACATACATGATGGTAATAATCACCACAGCCAACATTTAGGAAAT
 
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rJMFF035P10-          GAAGGGAATAATTTTCCTCTCACTACCCATTATAATTACTCTTTCACCACAAAACACACC
rJMFF039E14-                AATAATTTTCCTCTCACTACCCATTATAATTACTCTTTCACCACAAAACACACC
rJMFF040M04-          GAAGGGAATAATTTTCCTCTCACTACCCATTATAATTACTCTTTCACCACAAAACACACC
                      ____________________________________________________________
consensus             GAAGGGAATAATTTTCCTCTCACTACCCATTATAATTACTCTTTCACCACAAAACACACC
 
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rJMFF035P10-          CTATTAAATTAATGGGCAATACCATGGAGTTGATCTACAAACGCAATCGCCACCATATCC
rJMFF039E14-          TTATTAAATTAATGGGCAATACTATAGAAGTGTTCCACAAACTTAATGGCCACCATATCC
rJMFF040M04-          CTATTAAATTAATGGGCAATACCATGGAGTTGATCTACAAACGCAATCGCCACCATATCC
JMFN019B13+                                               ACAAACGCAATCGCCACCATATCC
JMFS072C05+                                               ACAAACGCAATCGCCACCATATCC
JMFN019F17+                                               ACAAACGCAATCGCCACCATATCC
                      ____________________________________________________________
consensus             CTATTAAATTAATGGGCAATACCATGGAGTTGATCTACAAACGCAATCGCCACCATATCC
 
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rJMFF035P10-          GCTCTTAAAGATTCCACTGCCTTGATTTGCAACTCTAACCACACACCGCTTTGTCTTCCA
rJMFF039E14-          GCTCTTAAAGATTCCACCGCCTTCGTGTGCAACTCTAACCACACACCG---TGTCTTCCG
rJMFF040M04-          GCTCTTAAAGATTCCACTGCCTTGATTTGCAACTCTAACCACACACCGCTTTGTCTTCCA
JMFN019B13+           GCCCTTAAAGATTCCACTGCCTTCATTTGCAACTCTAACCACACACCACTTTGTCTTCCG
JMFS072C05+           GCTCTTAAAGATTCCACTGCCTTGATTTGCAACTCTAACCACACACCGCTTTGTCTTCCA
JMFN019F17+           GCTCTTAAAGATTCCACTGCCTTGATTTGCAACTCTAACCACACACCGCTTTGTCTTCCA
                      ____________________________________________________________
consensus             GCTCTTAAAGATTCCACTGCCTTGATTTGCAACTCTAACCACACACCGCTTTGTCTTCCA
 
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rJMFF035P10-          ACGGTAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCTCCCCACTCAACTCC
rJMFF039E14-          GCAGTAGAGAA---GCACTCCTCCTTCACCGCCGCTTTTCCATCCACCCCTTTCAAATCC
rJMFF040M04-          ACGGTAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCTCCCCACTCAACTCC
JMFN019B13+           GCGATAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCACCCCATTCAAATCC
JMFS072C05+           ACGGTAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCTCCCCACTCAACTCC
JMFF040M04+                                                                  ACTCC
JMFN019F17+           ACGGTAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCTCCCCACTCAACTCC
                      ____________________________________________________________
consensus             ACGGTAGAGAAATTGCAATGCTCCTTCATTGCCGCTTTTCCATCCTCCCCACTCAACTCC
 
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rJMFF035P10-          ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
rJMFF039E14-          ACAATGANATCGGTGGAAGGCTTCTTTTCTANAGCATTGCTAAACGAATTCTCGCTTGAA
rJMFF040M04-          ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
JMFN019B13+           ACAATGGAATCGCTGGAAGGCTCCTTTACTAAAGCATTGCTAAATGTTTCCTCAGTTGAA
JMFS072C05+           ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
JMFF040M04+           ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
JMFN019F17+           ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
                      ____________________________________________________________
consensus             ACATTGGAATCAGTGGAAGGCTCCTTTACTAAAGCATTGCTAAAGGTTTTCTCGGTTGAA
 
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rJMFF035P10-          CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
rJMFF039E14-          CTAACCACGTTGTTTATATATCTCCAGCACCTCTTAAAATCTTGGACCTCTTTTGCACTC
rJMFF040M04-          CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
JMFN019B13+           CTAACCACCTTGTTTATAAATCCCCAGCACCTCTTAAAATCTTGGACCTCTTTTGCACTC
JMFS072C05+           CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
JMFF040M04+           CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
JMFF035P10+                   CTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
JMFN029C24+                                                           TCTTTTGCACTC
JMFN019F17+           CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
                      ____________________________________________________________
consensus             CCAACCACCTTATTTATAAATCCCCAGCACTTCTTAAAATCTTGGACGTCTTTTACACTC
 
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rJMFF035P10-          AAAGACTTTTCGCTATTTATCTTTTTCTC                               
rJMFF039E14-          AAAGACTTTTCGTTATTTATCTTTTTCTCCAAAGCCTCGAAGGCTTTGACTTTGTTGTGG
rJMFF040M04-          AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
JMFN019B13+           AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCCTCGAAAGCTCTGACTTTGTTGTGG
JMFS072C05+           AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
JMFF040M04+           AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
JMFF035P10+           AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
JMFN029C24+           AAAGACTTTTCGTTATGTATCTTTTTCTCCAAAGCCTCGAAGGCTTTGACTTTGTTGTGG
JMFN019F17+           AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
                      ____________________________________________________________
consensus             AAAGACTTTTCGCTATTTATCTTTTTCTCCAAAGCTTCGAAGGCTTTGATTTTGTTGTGG
 
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rJMFF039E14-          ACTTCCTTTAAGACAACA-GCCACGAAATTTCTCCTATCA                    
rJMFF040M04-          GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
JMFN019B13+           GCTTCCTTTAAGACGACA-GCCACGGTCTTTCTCCTATCACAAGTAGCGAGAAAGGCAGC
JMFS072C05+           GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
JMFF040M04+           GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
JMFF035P10+           GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
JMFN029C24+           ACTTCCTTTAAGACAACAGGCCACGAAATTTCTCCTATCACAAGTAGCGAGGAAGGCAGC
JMFN019F17+           GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
                      ____________________________________________________________
consensus             GCTTCCTTTAAGACGACA-GCCACGGTTTTTCTCCTATCAGAAGTAGCGAGGAAGGCAGC
 
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rJMFF040M04-          TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
JMFN019B13+           TCTGTGGCCGA-GTAAATCACGAGCGCAAAATATGACCAAGTTTGAGTCATCTCGACCAA
JMFS072C05+           TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
JMFF040M04+           TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
JMFF035P10+           TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
JMFN029C24+           TCTGTGGCCGAGGTAAATGGCGAGCGCAAAATGTGACCAGCTCGGAGTCATCTGGACCGA
JMFN019F17+           TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
                      ____________________________________________________________
consensus             TCTGTGGCCGA-GTAAATCGCGAGCGCAAAATATGACCATGCTAGAGTCATCTCGACCGA
 
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rJMFF040M04-          GGGCTTCAGTGCATTTCTTAAGGAGTANGGTTTTATGGTCAGA                 
JMFN019B13+           GGGCTTTGGTGCATTTATTGAGGAGTAGGGTTTTGTGGTCGGAGGGAGGTGGACGGTGGG
JMFS072C05+           GGGCTTCAGTGCATTTCTTAAGGAGTAGGGTTTTATGGTCAGAGGGAGGTGGACGGTGCG
JMFF040M04+           GGGCTTCAGTGCATTTCTTAAGGAGTAGGGTTTTATGGTCAGAGGGAGGTGGACGGTGCG
JMFF035P10+           GGGCTTCAGTGCATTTCTTAAGGAGTAGGGTTTTATGGTCAGAGGGAGGTGGACGGTGCG
JMFN029C24+           GGGCTTCAATGCATTTGTTAAAGATTAGGGTTTTCTCATCAGAGGGAGGTGAACGGTGCA
JMFN019F17+           GGGCTTCAGTGCATTTCTTAAGGAGTAGGGTTTTATGGTCAGAGGGAGGTGGACGGTGCG
                      ____________________________________________________________
consensus             GGGCTTCAGTGCATTTCTTAAGGAGTAGGGTTTTATGGTCAGAGGGAGGTGGACGGTGCG
 
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JMFN019B13+           CAACCGCTGTAGTGGCGGTGGTGAATGCCACAACCAGGATGAGGAGGATAGATGGAGGGA
JMFS072C05+           CAACAGCCGTAGTGGCGATGGTGAATGCCACAACAAGGATGAGGAGGATAGATGGAGGGG
JMFF040M04+           CAACAGCCGTAGTGGCGATGGTG                                     
JMFF035P10+           CAACAGCCGTAGTGGCGATGGTG                                     
JMFN029C24+           CAACCGCCATAGTGGCGGTGGTG                                     
JMFN019F17+           CAACAGCCGTAGTGGCGATGGTGAATGCCACAACAAGGATGAGGAGGATAGATGGAGGGG
                      ____________________________________________________________
consensus             CAACAGCCGTAGTGGCGATGGTGAATGCCACAACAAGGATGAGGAGGATAGATGGAGGGG
 
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JMFN019B13+           CGGCGGTGGCGGCCATGTTATTAGATAGAGATATGGGTTGTTTAAGTGTGGC        
JMFS072C05+           CGGCTGTGGCGGCCATGTTATTAGATAGAGATATGGGTTGTTTAAGTGTGGCAGATATAA
JMFN019F17+           CGGCTGTGGCGGCCATGTTATTAGATAGAGATATGGGTTGTTTAAGTGTGGCAGATATAA
                      ____________________________________________________________
consensus             CGGCTGTGGCGGCCATGTTATTAGATAGAGATATGGGTTGTTTAAGTGTGGCAGATATAA