Contig 000341:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018P15+                                                         GTCACACACAACGA
                      ____________________________________________________________
consensus                                                           GTCACACACAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018P15+           GACAAAAATAACTCTCCGTACGAGTAATAATAATACAGGCATGGTAAAAACAGTAAAAAA
                      ____________________________________________________________
consensus             GACAAAAATAACTCTCCGTACGAGTAATAATAATACAGGCATGGTAAAAACAGTAAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+            GGCAGATATAACGGGGACCGCACGTGGCTCGCTCCACCGACGAAAACCGGCGACTCCAT
JMFN018P15+           TGGCAGATATAACGGGGACCGCACGTGGCTCGCTCCACCGACGAAAACCGGCGACTCCAT
                      ____________________________________________________________
consensus             TGGCAGATATAACGGGGACCGCACGTGGCTCGCTCCACCGACGAAAACCGGCGACTCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           ACACAGTTACACACACACATAGATACTACGGCTTAAAATTCAGCCATTTTCCGGTTAAAT
JMFN018P15+           ACACAGTTACACACACACATAGATACTACGGCTTAAAATTCAGCCATTTTCAGGTTAAAT
                      ____________________________________________________________
consensus             ACACAGTTACACACACACATAGATACTACGGCTTAAAATTCAGCCATTTTCCGGTTAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           CTATACTTCTTCTTAGCCTCCCGCAGGTTCCTCAAGCTTCGAATGGCCAAAATATCGCCT
JMFN018P15+           CTATACTTCTTCTTAGCCTCCCGCAGGTTCCTCAAGCTTCGAATGGCCAAAATATCGCCT
                      ____________________________________________________________
consensus             CTATACTTCTTCTTAGCCTCCCGCAGGTTCCTCAAGCTTCGAATGGCCAAAATATCGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           CGCTTGACATCTACATCTTTCTGGAAATTGTCAATGTTTCCTATAGGCTTAGAAAATGCC
JMFN018P15+           CGCTTGACATCTACATCTTTCTGGAAATTGTCAATGTTTCCTATAGGCTTAGAAAATGCC
                      ____________________________________________________________
consensus             CGCTTGACATCTACATCTTTCTGGAAATTGTCAATGTTTCCTATAGGCTTAGAAAATGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           TTGGATCCACTGAACTGAGCCAAGTCTTTGTCAGAAGGATTGTGAGACGAGAGGTAGAGG
JMFN018P15+           TTGGATCCACTGAACTGAGCCAAGTCTTTGTCAGAAGGATTGTGAGACGAGAGGTAGAGG
                      ____________________________________________________________
consensus             TTGGATCCACTGAACTGAGCCAAGTCTTTGTCAGAAGGATTGTGAGACGAGAGGTAGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           ATGAGGAAGCAAAGGATAGTCAGGACGGGGATGAGATGAACGTAGTTCTCGGATTTGCTG
JMFN018P15+           ATGAGGAAGCAAAGGATAGTCAGGACGGGGATGAGATGAACGTAGTTCTCGGATTTGCTG
                      ____________________________________________________________
consensus             ATGAGGAAGCAAAGGATAGTCAGGACGGGGATGAGATGAACGTAGTTCTCGGATTTGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           AGATACTTCACCGACTTGCGCTCTTCGTCTTCGGCATAGTTAACCGGGAGTGAAACGGTG
JMFN018P15+           AGATACTTCACCGACTTGCGCTCTTCGTCTTCGGCATAGTTAACCGGGAGTGAAACGGTG
                      ____________________________________________________________
consensus             AGATACTTCACCGACTTGCGCTCTTCGTCTTCGGCATAGTTAACCGGGAGTGAAACGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           GAATCCGCCGCCGTGACGGTGGCGGAGGCGACGTCATCGCGGCCTCCTTGAACGAGGAGG
JMFN018P15+           GAATCCGCCGCCGTGACGGTGGCGGAGGCGACGTCATCGCGGCCTCCTTGAACGAGGAGG
                      ____________________________________________________________
consensus             GAATCCGCCGCCGTGACGGTGGCGGAGGCGACGTCATCGCGGCCTCCTTGAACGAGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041N16+           TGCTTGGATCCTGGCGAGCCCAGTGATTGGCGCTGCATTGTTGGGAGGAGGAAGAGAGAG
JMFN018P15+           TGCTTGGATCCTGGCGAGCCCAGTGATTGGCGCTGCATTGTTGGGAGGAGGAAGAGAGAG
                      ____________________________________________________________
consensus             TGCTTGGATCCTGGCGAGCCCAGTGATTGGCGCTGCATTGTTGGGAGGAGGAAGAGAGAG