Contig 000340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027C19Sequence270000340 (3)ref|XP_006366754.1|6e-41PREDICTED: dihydrofolate reductase-like [Solanum tuberosum]567005434 (3)ref|XP_011079224.1|7e-55PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]
JMFF027F03Sequence546000340 (3)ref|XP_011079224.1|6e-93PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]678005434 (3)ref|XP_011079224.1|4e-83PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]
JMFN018O19Sequence604000340 (3)ref|XP_011079224.1|4e-102PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]

Alignment

This contig is upended


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JMFN018O19+                                                                   TGGC
                      ____________________________________________________________
consensus                                                                     TGGC
 
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JMFF027F03+                                               TCCTATGAAATGCACCGACTTAAC
JMFN018O19+           CAGCTCCTGGGAAGGCAGCTTCAGCCAGTCCTTCTCTCCTATGAAATGCACCGACTTAAC
                      ____________________________________________________________
consensus             CAGCTCCTGGGAAGGCAGCTTCAGCCAGTCCTTCTCTCCTATGAAATGCACCGACTTAAC
 
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JMFF027F03+           CTTCATGGGGTGTTTGTATGCAACCTGGCAAATGGTTGGCTCACGAAATTTGGAACCTGA
JMFN018O19+           CTTCATGGGGTGTTTGTATGCAACCTGGCAAATGGTTGGCTCACGAAATTTGGAACCTGA
                      ____________________________________________________________
consensus             CTTCATGGGGTGTTTGTATGCAACCTGGCAAATGGTTGGCTCACGAAATTTGGAACCTGA
 
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JMFF027F03+           AATGGATACCAGCAGTTTAAAGGGTGGATGATCTTTCAGTATCTTCCCCTCTGCTTGATA
JMFN018O19+           AATGGATACCAGCAGTTTAAAGGGTGGATGATCTTTCAGTATCTTCCCCTCTGCTTGATA
                      ____________________________________________________________
consensus             AATGGATACCAGCAGTTTAAAGGGTGGATGATCTTTCAGTATCTTCCCCTCTGCTTGATA
 
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JMFF027F03+           ACCTGCCAAAAGGGCTGCTATGGTTGCTCCCTGGGAGAAGCCTAGCAGGCCATGGAAAGG
JMFN018O19+           ACCTGCCAAAAGGGCTGCTATGGTTGCTCCCTGGGAGAAGCCTAGCAGGCCATGGAAAGG
                      ____________________________________________________________
consensus             ACCTGCCAAAAGGGCTGCTATGGTTGCTCCCTGGGAGAAGCCTAGCAGGCCATGGAAAGG
 
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JMFF027F03+           GCCGTTGCTTGTGATGTACTGACACAAGTAGGAGATGCACTCTTCCAAGTTGGTATATTC
JMFF027C19+                                         GGAGATGCACTCTTCCAAGTTGGTATANTC
JMFN018O19+           GCCGTTGCTTGTGATGTACTGACACAAGTAGGAGATGCACTCTTCCAAGTTGGTATATTC
                      ____________________________________________________________
consensus             GCCGTTGCTTGTGATGTACTGACACAAGTAGGAGATGCACTCTTCCAAGTTGGTATATTC
 
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JMFF027F03+           TGTGAAATCCTCGTTGAACTGAAACCACTCAAAATAAGGAGGTGGAAATATGCCTTCTAT
JMFF027C19+           TGTGANATCCTCGNNGAACTGAAACCACTCAAAATAAGGAGGTGGAAATATGCCTTCTAT
JMFN018O19+           TGTGAAATCCTCGTTGAACTGAAACCACTCAAAATAAGGAGGTGGAAATATGCCTTCTAT
                      ____________________________________________________________
consensus             TGTGAAATCCTCGTTGAACTGAAACCACTCAAAATAAGGAGGTGGAAATATGCCTTCTAT
 
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JMFF027F03+           GGATGATTCTCCCCCTGCTGGAAATATTCCATCTGGAAATTCCATGTGAAAATGAAGAGC
JMFF027C19+           GGATGATTCTCCCCCTGCTGGAAATATTCCATCTGGAAATTCCATGTGAAAATGAAGAGC
JMFN018O19+           GGATGATTCTCCCCCTGCTGGAAATATTCCATCTGGAAATTCCATGTGAAAATGAAGAGC
                      ____________________________________________________________
consensus             GGATGATTCTCCCCCTGCTGGAAATATTCCATCTGGAAATTCCATGTGAAAATGAAGAGC
 
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JMFF027F03+           AAAGATGGACGGATCCCATTTGCTGATTTGTTTTCTTAAGAAATTGCCACTGGTTCTGAA
JMFF027C19+           AAAGATGGACGGATCCCATTTGCTGATTTGTTTTCTTAAGAAATTGCCACTGGTTCTGAA
JMFN018O19+           AAAGATGGACGGATCCCATTTGCTGATTTGTTTTCTTAAGAAATTGCCACTGGTTCTGAA
                      ____________________________________________________________
consensus             AAAGATGGACGGATCCCATTTGCTGATTTGTTTTCTTAAGAAATTGCCACTGGTTCTGAA
 
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JMFF027F03+           TCCATGGAGGCATAGTATCTTCATCTTTCTTGCCGAAGCTTTGTTCTCCATTGTTTTCTT
JMFF027C19+           TCCATGGAGGCATAGTATCTTCATCTTTCTTGCCGAAGCTTTGTTCTCCATTGTTTTCTT
JMFN018O19+           TCCATGGAGGCATAGTATCTTCATCTTTCTTGCCGAAGCTTTGTTCTCCATTGTTTTCTT
                      ____________________________________________________________
consensus             TCCATGGAGGCATAGTATCTTCATCTTTCTTGCCGAAGCTTTGTTCTCCATTGTTTTCTT
 
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JMFF027F03+           AATATATCCAAATCAGACCAAAGTGTATATAAATGTGTA                     
JMFN018O19+           AATATATCCAAATCAGACCAAAGTGTATATAAATGTGTAGCTAGGTAAGTTGAAATTGAA
                      ____________________________________________________________
consensus             AATATATCCAAATCAGACCAAAGTGTATATAAATGTGTAGCTAGGTAAGTTGAAATTGAA