Contig 000333:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034A14-                                                               CCCGACN
                      ____________________________________________________________
consensus                                                                  CCCGACN
 
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rJMSF034A14-          TTTAATTTGGACNATTTAACCACTGGACTATCAGAATCTTTTCAATTGTGGTCCTTCCGT
                      ____________________________________________________________
consensus             TTTAATTTGGACNATTTAACCACTGGACTATCAGAATCTTTTCAATTGTGGTCCTTCCGT
 
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rJMSF034A14-          CAAATCCAAGTTAAGTGGACGTCAATTTAAAGGGTAAAAGCGTCATTTCCATCTTCCCTC
                      ____________________________________________________________
consensus             CAAATCCAAGTTAAGTGGACGTCAATTTAAAGGGTAAAAGCGTCATTTCCATCTTCCCTC
 
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rJMSF034A14-          CCTCTTCTGTCTTCTCTTCGTTGACAATGCAACAGAGCAGACCACGTGGACTGCGTGGTT
JMFN016C09+                                 GACAGTGCAACAGAGCATGCCACGTGGACTGTGTGGCT
                      ____________________________________________________________
consensus             CCTCTTCTGTCTTCTCTTCGTTGACAGTGCAACAGAGCATGCCACGTGGACTGTGTGGTT
 
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rJMSF034A14-          GGGCGGTAATGACGGCAGATGGTGGTGGTCGTCGGTAATGGTTGCTGTCCGGCATAACGG
JMFN016C09+           GGACGGTATTGACGGCAGATGGTGGTGGTCGTCGGTAATGGATGCTGTCCGGCGTAACGG
                      ____________________________________________________________
consensus             GGGCGGTATTGACGGCAGATGGTGGTGGTCGTCGGTAATGGTTGCTGTCCGGCGTAACGG
 
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rJMSF034A14-          CGCGGTGGTGGAACCCTCTCTCTCGCTCGTCGACGGCAAAGGTAGT----------TACA
JMFN016C09+           CGCGATGGTGGAGCCCTCTCTCTCGCTCGTCAACAGCAATGGTAGTAGCTTTACTCTCCA
                      ____________________________________________________________
consensus             CGCGGTGGTGGAGCCCTCTCTCTCGCTCGTCGACGGCAATGGTAGTAGCTTTACTCTCCA
 
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rJMSF034A14-          GTAGCGGACTCCCGACGGCAAAGCAGGATAAATCCAAAGAAAGATTCAGCAACACCATCA
JMFN016C09+           GTAGCGGACTCCCGACGGCAAAGCATGATAAATCCAAAGAAAGATTCAGCAACTCCATCA
                      ____________________________________________________________
consensus             GTAGCGGACTCCCGACGGCAAAGCATGATAAATCCAAAGAAAGATTCAGCAACTCCATCA
 
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rJMSF034A14-          TAGCACAAATTATATT                                            
JMFN016C09+           TATCACAAATTATATTCTTTGACTTGAGATCTGATTCAGAATTGGGTCTAGTCCCTGTAG
                      ____________________________________________________________
consensus             TATCACAAATTATATTCTTTGACTTGAGATCTGATTCAGAATTGGGTCTAGTCCCTGTAG
 
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JMFS043C12+                                                              TGGCCCACG
JMFN016C09+           TAAGAAAAAGTCGCTGAATTCCGACGGAAAAGCAGGGAACAATCCGAGGACTGGCCCACG
                      ____________________________________________________________
consensus             TAAGAAAAAGTCGCTGAATTCCGACGGAAAAGCAGGGAACAATCCGAGGACTGGCCCACG
 
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JMFS043C12+           GTGGCCAGAGGCGAGCTATCCATTCTCAGAAACTTGCGCGACTCCTCGGGGGACCACCGT
JMFN016C09+           GTGGCCAGAGGCGAGCTATCCATTCTCAGAAACTTGCGCGACTCCTCGGGGGACCACCGT
                      ____________________________________________________________
consensus             GTGGCCAGAGGCGAGCTATCCATTCTCAGAAACTTGCGCGACTCCTCGGGGGACCACCGT
 
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JMFS043C12+           GATATTGGATCGTCGACTCCCCCGCTGTGCCATTGGAGGACGAAGGCGAAGAGCGCAAGG
JMFN016C09+           GATATTGGATCGTCGACTCCCCCGCTGTGCCATTGGAGGACGAAGGCGAAGAGCGCAAGG
                      ____________________________________________________________
consensus             GATATTGGATCGTCGACTCCCCCGCTGTGCCATTGGAGGACGAAGGCGAAGAGCGCAAGG
 
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JMFS043C12+           GAGATGGGCTGCAGAGTGAGAGGAGAACTAGATTAGTGGCGAAGGAGGCGGCGGCGAATG
JMFN016C09+           GAGATGGGCTGCAGAGTGAGAGGAGAACTAGATTAGTGGCGAAGGAGGCGGCGGCGAATG
                      ____________________________________________________________
consensus             GAGATGGGCTGCAGAGTGAGAGGAGAACTAGATTAGTGGCGAAGGAGGCGGCGGCGAATG
 
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JMFS043C12+           CGGAAGACGGTGGTTGGGGCCGGAGAGAAGCACTGAGACCCGCCATG             
JMFN016C09+           CGGAAGACGGTGGTTGGGGCCGGAGAGAAGCACTGAGACCCGCCATGGTAGATGGGGAAA
                      ____________________________________________________________
consensus             CGGAAGACGGTGGTTGGGGCCGGAGAGAAGCACTGAGACCCGCCATGGTAGATGGGGAAA