Contig 000329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008J12Sequence625000329 (2)ref|XP_009622268.1|1e-96PREDICTED: axial regulator YABBY 5-like isoform X1 [Nicotiana tomentosiformis]
JMFN014G17Sequence590000329 (2)ref|XP_009622268.1|1e-63PREDICTED: axial regulator YABBY 5-like isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN008J12+                             CAGTGCAGCCCTGTGAGTCATATGCTNTCCAGTGCCCTCAGT
                      ____________________________________________________________
consensus                               CAGTGCAGCCCTGTGAGTCATATGCTNTCCAGTGCCCTCAGT
 
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JMFN008J12+           ACCCCCAATCTTGGGTTGATTGTTGGACTCCAGCATGAGACCAAAGTGAATGTGAGGAAA
                      ____________________________________________________________
consensus             ACCCCCAATCTTGGGTTGATTGTTGGACTCCAGCATGAGACCAAAGTGAATGTGAGGAAA
 
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JMFN008J12+           GTGTGCCCAATTTTTGGCAGCTGTACTAAATGCTTCCCGGTGACTGATATCTGGGTTATT
                      ____________________________________________________________
consensus             GTGTGCCCAATTTTTGGCAGCTGTACTAAATGCTTCCCGGTGACTGATATCTGGGTTATT
 
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JMFN008J12+           GGCCTTGATCCTTTGAATCTCCTCCTTTATGAATTGGTTGTATGCAGAAGGCACTCGCTG
JMFN014G17+                     CTTTGAATCTCCTCCTTTATGAATTGGTTGTATGCAGAAGGCACTCGCTG
                      ____________________________________________________________
consensus             GGCCTTGATCCTTTGAATCTCCTCCTTTATGAATTGGTTGTATGCAGAAGGCACTCGCTG
 
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JMFN008J12+           CCTCTTCTCGGGAGGACGATTCACAATCCTTTCCTCGGTACGATTAGTGATAGGTGGTCG
JMFN014G17+           CCTCTTCTCGGGAGGACGATTCACAATCCTTTCCTCGGTACGATTAGTGATAGGTGGTCG
                      ____________________________________________________________
consensus             CCTCTTCTCGGGAGGACGATTCACAATCCTTTCCTCGGTACGATTAGTGATAGGTGGTCG
 
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JMFN008J12+           CATTGCCATTCCCATCCTGTTACTGTATTTGGAAGAGGAGCCATAGTCCATCCTATACTC
JMFN014G17+           CATTGCCATTCCCATCCTGTTACTGTATTTGGAAGAGGAGCCATAGTCCATCCTATACTC
                      ____________________________________________________________
consensus             CATTGCCATTCCCATCCTGTTACTGTATTTGGAAGAGGAGCCATAGTCCATCCTATACTC
 
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JMFN008J12+           AGGAGAAGTGTAGCTTGGTACCTGATGAAGATGGTGATCTTGCCAGTGTGAGGGAGAAGA
JMFN014G17+           AGGAGAAGTGTAGCTTGGTACCTGATGAAGATGGTGATCTTGCCAGTGTGAGGGAGAAGA
                      ____________________________________________________________
consensus             AGGAGAAGTGTAGCTTGGTACCTGATGAAGATGGTGATCTTGCCAGTGTGAGGGAGAAGA
 
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JMFN008J12+           GGAAGAGGATGATGAGAGAGACTGAAATGCCGCTGCCATGTTGACCGACCACAGATTTGA
JMFN014G17+           GGAAGAGGATGATGAGAGAGACTGAAATGCCGCTGCCATGTTGACCGACCACAGATTTGA
                      ____________________________________________________________
consensus             GGAAGAGGATGATGAGAGAGACTGAAATGCCGCTGCCATGTTGACCGACCACAGATTTGA
 
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JMFN008J12+           ACAGTGCCCGCATCGGACGGTCACGATGTCGAACAAGCTGCTGCATGGGACACTCACCGC
JMFN014G17+           ACAGTGCCCGCATCGGACGGTCACGATGTCGAACAAGCTGCTGCATGGGACACTCACCGC
                      ____________________________________________________________
consensus             ACAGTGCCCGCATCGGACGGTCACGATGTCGAACAAGCTGCTGCATGGGACACTCACCGC
 
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JMFN008J12+           AAGAACGATATTGCAGAAATTGCAAGGGATGTAGCAGAGTTG                  
JMFN014G17+           AAGAACGATATTGCAGAAATTGCAAGGGATGTAGCAGAGTTGCTCGGAGGCAACATCGGT
                      ____________________________________________________________
consensus             AAGAACGATATTGCAGAAATTGCAAGGGATGTAGCAGAGTTGCTCGGAGGCAACATCGGT
 
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JMFN014G17+           TGACATTTTTGGTTGATAATTGATAAACAAACAAGAAATGAAAGGAGAGGGAGTTGATTG
                      ____________________________________________________________
consensus             TGACATTTTTGGTTGATAATTGATAAACAAACAAGAAATGAAAGGAGAGGGAGTTGATTG
 
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JMFN014G17+           AAGTGGAACAAGGGAGAAGCAATTAGAGGTTCTTATATAGAGAGAGGCTCACTAAAGGGG
                      ____________________________________________________________
consensus             AAGTGGAACAAGGGAGAAGCAATTAGAGGTTCTTATATAGAGAGAGGCTCACTAAAGGGG
 
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JMFN014G17+           GGAAAAAAATAAAGGCTTTTATTCTCTCTCTCTATCTTGCTCCAGGTGAGCTTATGTATC
                      ____________________________________________________________
consensus             GGAAAAAAATAAAGGCTTTTATTCTCTCTCTCTATCTTGCTCCAGGTGAGCTTATGTATC