Contig 000324:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012O21Sequence544000324 (3)
JMFN014A18Sequence553000324 (3)
JMFN036C06Sequence543000324 (3)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN036C06+                                                                      G
JMFN014A18+                                                                      G
JMFN012O21+                                                                   AAAG
                      ____________________________________________________________
consensus                                                                     AAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN036C06+           TTAAAAGGATTTTATTATGAGACGATTTTACATATAAGCACGTAGAGGTGCAAACGCTCT
JMFN014A18+           TTAAAAGCATTTTATTATTAGACGATTTTACATATAAGCACGTAGAGGTGCACACGCTCT
JMFN012O21+           TTAAAAGGATTTTATTATGAGACGATTTTACATATAAGCACGTAGAGGTGCAAACGCTCT
                      ____________________________________________________________
consensus             TTAAAAGGATTTTATTATGAGACGATTTTACATATAAGCACGTAGAGGTGCAAACGCTCT
 
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JMFN036C06+           CTTAAAGGCCAAAATAAAATTAAAGCAATTCGTCTCCTGAGGTGATTATTGTGGCGGTGG
JMFN014A18+           ATTAAAGGCCAAAATAAAATTAAAGCAATTCGTCTCCTGAGGTGATTATTGTGGCGGTGG
JMFN012O21+           CTTAAAGGCCAAAATAAAATTAAAGCAATTCGTCTCCTGAGGTGATTATTGTGGCGGTGG
                      ____________________________________________________________
consensus             CTTAAAGGCCAAAATAAAATTAAAGCAATTCGTCTCCTGAGGTGATTATTGTGGCGGTGG
 
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JMFN036C06+           GGAAATATAGTAACAGATGAGATGAGATGAGATCAAGCACAATAGCCGTCTAAAATAATT
JMFN014A18+           GGAAATATAGTAACAGATGAGATGAGATGAGATCAAGCCCAATAGCCGTCTAAAATAATT
JMFN012O21+           GGAAATATAGTAACAGATGAGATGAGATGAGATCAAGCACAATAGCCGTCTAAAATAATT
                      ____________________________________________________________
consensus             GGAAATATAGTAACAGATGAGATGAGATGAGATCAAGCACAATAGCCGTCTAAAATAATT
 
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JMFN036C06+           TTCTCACAACCGGCCGTTGCTGGACAGTCCCGACAATCTGCGTCAGTTTCACACTTCCCA
JMFN014A18+           TTCTCACAACCGGCCGTTGTTGGACAGTCCCGACAATCTGCGTCAGTTTCACACTTCCCA
JMFN012O21+           TTCTCACAACCGGCCGTTGCTGGACAGTCCCGACAATCTGCGTCAGTTTCACACTTCCCA
                      ____________________________________________________________
consensus             TTCTCACAACCGGCCGTTGCTGGACAGTCCCGACAATCTGCGTCAGTTTCACACTTCCCA
 
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JMFN036C06+           CAACCAAGGATCGCCTTGCTCTTCTTCGTTTCCGATGCCAGAACCAGAGTGGAACCAAAT
JMFN014A18+           CAACCAAGGATCGCCTTGCTCTTCTTCGTTTCCGATGCCAGAACCAGAGTGGAACCAAAT
JMFN012O21+           CAACCAAGGATCGCCTTGCTCTTCTTCGTTTCCGATGCCAGAACCAGAGTGGAACCAAAT
                      ____________________________________________________________
consensus             CAACCAAGGATCGCCTTGCTCTTCTTCGTTTCCGATGCCAGAACCAGAGTGGAACCAAAT
 
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JMFN036C06+           CCAACACAATGACCCATTTCAGATCCAGAGATTTTGTTGATGCAGAAATTGGTAGAGTAA
JMFN014A18+           CCAACACAATGACCCATTTCAGATCCAGAGATTTTGTTGATGCAGAAATTGGTAGAGTAA
JMFN012O21+           CCAACACAATGACCCATTTCAGATCCAGAGATTTTGTTGATGCAGAAATTGGTAGAGTAA
                      ____________________________________________________________
consensus             CCAACACAATGACCCATTTCAGATCCAGAGATTTTGTTGATGCAGAAATTGGTAGAGTAA
 
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JMFN036C06+           ACGCTGTTGGCTTTGCAGTCATCATGGGACTTGCAAAGTTGTCCAGTCATGAACAACTGC
JMFN014A18+           ACGCTGTTGGCTTTGCAGTCTTCATGGGACTTGCAAAGTTGTCCAATCATGAACAACTGC
JMFN012O21+           ACGCTGTTGGCTTTGCAGTCATCATGGGACTTGCAAAGTTGTCCAGTCATGAACAACTGC
                      ____________________________________________________________
consensus             ACGCTGTTGGCTTTGCAGTCATCATGGGACTTGCAAAGTTGTCCAGTCATGAACAACTGC
 
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JMFN036C06+           TTCTTGTTTGGTCCTACAGATATTTGTGCCATCAAACTTGATGGCAACAAAGATGCAACC
JMFN014A18+           TTCTTGTTTGGTCCTACAGATATTTGTGCCATCATACTTGATGGCAACAAAGATGCAACC
JMFN012O21+           TTCTTGTTTGGTCCTACAGATATTTGTGCCATCAAACTTGATGGCAACAAAGATGCAACC
                      ____________________________________________________________
consensus             TTCTTGTTTGGTCCTACAGATATTTGTGCCATCAAACTTGATGGCAACAAAGATGCAACC
 
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JMFN036C06+           ATGAAAAGCAATAGGAAGCAAGCTGGCTTGATTGAAACTCTCTCCATTATCTC       
JMFN014A18+           ATGAAAAG                                                    
JMFN012O21+           ATGAAAAGCAATAGGAAGCAAGCTGGCTTGATTGAAACTCTCTCCATTATCTCTTGTTGT
                      ____________________________________________________________
consensus             ATGAAAAGCAATAGGAAGCAAGCTGGCTTGATTGAAACTCTCTCCATTATCTCTTGTTGT