Contig 000323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008J14Sequence639000323 (2)ref|XP_006346278.1|188PREDICTED: uncharacterized protein LOC102605286 [Solanum tuberosum]
JMFN012F14Sequence535000323 (2)ref|XP_010029875.1|152PREDICTED: uncharacterized protein LOC104419798 [Eucalyptus grandis] gb|KCW56830

Alignment

This contig is upended


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JMFN008J14-                                                       ATCCCCCACCCCCTGA
                      ____________________________________________________________
consensus                                                         ATCCCCCACCCCCTGA
 
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JMFN008J14-           ATTGGATATATATATATAATCTCGGGTTGAAGTTTACTACTGGGTTGGAGAGAAATTTGA
                      ____________________________________________________________
consensus             ATTGGATATATATATATAATCTCGGGTTGAAGTTTACTACTGGGTTGGAGAGAAATTTGA
 
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JMFN008J14-           ATAATGGCTCACCTCCAGTTGTTGAAATATAGTGTGTCGTCATTTTTGAGTTCTCATACA
                      ____________________________________________________________
consensus             ATAATGGCTCACCTCCAGTTGTTGAAATATAGTGTGTCGTCATTTTTGAGTTCTCATACA
 
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JMFN008J14-           AAATTGGCGTGCAGTTGCTCGGATTTCAGCTCGGGGATCATAGGATATAGAAGAAGGAGA
                      ____________________________________________________________
consensus             AAATTGGCGTGCAGTTGCTCGGATTTCAGCTCGGGGATCATAGGATATAGAAGAAGGAGA
 
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JMFN008J14-           AGGAATTTTCGGTTTCAAAGCAAGCGGAATCGGAGCTTCAGATTATTGATTGATCGGAAG
                      ____________________________________________________________
consensus             AGGAATTTTCGGTTTCAAAGCAAGCGGAATCGGAGCTTCAGATTATTGATTGATCGGAAG
 
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JMFN008J14-           CTTAGGGTTTCATGCAGAACTCAGGACAACGATACTCCAAGCAATGGTGAAGAACCTCCT
                      ____________________________________________________________
consensus             CTTAGGGTTTCATGCAGAACTCAGGACAACGATACTCCAAGCAATGGTGAAGAACCTCCT
 
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JMFN008J14-           GAGTCGTTGTTTATGAAAGAATTGAAGAAACGAGGCATGACTCCTACTTCATTACTTGAA
                      ____________________________________________________________
consensus             GAGTCGTTGTTTATGAAAGAATTGAAGAAACGAGGCATGACTCCTACTTCATTACTTGAA
 
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JMFN008J14-           GAAAGCAACAGAAGCATCTTGGAGGATGAAGAAACAAAAATTAAGGAAGAAGATGGAGGC
                      ____________________________________________________________
consensus             GAAAGCAACAGAAGCATCTTGGAGGATGAAGAAACAAAAATTAAGGAAGAAGATGGAGGC
 
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JMFN008J14-           TTTTCTCGTAGAAATGCCATCTCGACGGAATCAGGAAGAAACTTAACTAATCAGAGAGAG
JMFN012F14+                TCGTAGAAATGCCATCTCGACGGAATCAGGAAGAAACTTAACTAATCAGAGAGAG
                      ____________________________________________________________
consensus             TTTTCTCGTAGAAATGCCATCTCGACGGAATCAGGAAGAAACTTAACTAATCAGAGAGAG
 
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JMFN008J14-           CAGTCCATGGCCCTTAATAGTGAAGGCATTGAGGGCTTAATTCCACGGGCTAAGCTTTTG
JMFN012F14+           CAGTCCATGGCCCTTAATAGTGAAGGCATTGAGGGCTTAATTCCACGGGCTAAGCTTTTG
                      ____________________________________________________________
consensus             CAGTCCATGGCCCTTAATAGTGAAGGCATTGAGGGCTTAATTCCACGGGCTAAGCTTTTG
 
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JMFN008J14-           CTGACCCTTGGAGGGACGTTCTTTCTGGGATTCGGGCCACTAATCCTAGTAACCGTTGCA
JMFN012F14+           CTGACCCTTGGAGGGACGTTCTTTCTGGGATTCGGGCCACTAATCCTAGTAACCGTTGCA
                      ____________________________________________________________
consensus             CTGACCCTTGGAGGGACGTTCTTTCTGGGATTCGGGCCACTAATCCTAGTAACCGTTGCA
 
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JMFN008J14-           TTTTTCTCTGCTTTGTACCTGTA                                     
JMFN012F14+           TTTTTCTCTGCTTTGTACCTGTATTTCGGACCCACATTTATCCATGACGGAAGCAATGCT
                      ____________________________________________________________
consensus             TTTTTCTCTGCTTTGTACCTGTATTTCGGACCCACATTTATCCATGACGGAAGCAATGCT
 
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JMFN012F14+           CGCATCACTCCACCGCAATATGTTGATCCCTATGCACTACTCGAAGACGAAAGGATATCC
                      ____________________________________________________________
consensus             CGCATCACTCCACCGCAATATGTTGATCCCTATGCACTACTCGAAGACGAAAGGATATCC
 
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JMFN012F14+           CAAACTGCACCTGGTCTAAACTGAAGAACTCTGCTTCAAATGTCAAGTACATGTTTGTTT
                      ____________________________________________________________
consensus             CAAACTGCACCTGGTCTAAACTGAAGAACTCTGCTTCAAATGTCAAGTACATGTTTGTTT
 
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JMFN012F14+           CACATATATATACTCTTCGACTTAATGTTGTGATCTAGTTAGGAAGTAGGTAGGAATTTC
                      ____________________________________________________________
consensus             CACATATATATACTCTTCGACTTAATGTTGTGATCTAGTTAGGAAGTAGGTAGGAATTTC
 
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JMFN012F14+           CGACTACTAGGTTAAAGTTTTCTTTGATCTACCAATGTAAAATATGTATGTACTCAATTC
                      ____________________________________________________________
consensus             CGACTACTAGGTTAAAGTTTTCTTTGATCTACCAATGTAAAATATGTATGTACTCAATTC
 
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JMFN012F14+           CCCTGAAAGAAGATTTCAAATGXXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             CCCTGAAAGAAGATTTCAAATGNNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC