Contig 000321:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012B04Sequence617000321 (5)ref|NP_001275291.1|7e-107aminomethyltransferase, mitochondrial [Solanum tuberosum] sp|P54260.1|GCST_SOLTU
JMSF001B24Sequence287002290 (4)emb|CDP04419.1|9e-42unnamed protein product [Coffea canephora]735000321 (5)ref|XP_009782825.1|3e-132PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0
JMSF002D04Sequence321002290 (4)emb|CDP04419.1|3e-40unnamed protein product [Coffea canephora]746000321 (5)ref|XP_009782825.1|4e-143PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0
JMSF015M03Sequence511002290 (4)ref|XP_002272701.1|2e-94PREDICTED: aminomethyltransferase, mitochondrial [Vitis vinifera] ref|XP_0106553788000321 (5)ref|XP_010042063.1|3e-140PREDICTED: aminomethyltransferase, mitochondrial [Eucalyptus grandis]
JMSF028K17Sequence653002290 (4)sp|P93256.1|GCST_MESCR2e-69RecName: Full=Aminomethyltransferase, mitochondrial; AltName: Full=Glycine clea703000321 (5)ref|XP_009782825.1|2e-145PREDICTED: aminomethyltransferase, mitochondrial [Nicotiana sylvestris] ref|XP_0

Alignment

This contig is upended


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rJMSF015M03+                      GGGATGTTTCGTGGCACATCCATGACGAGCGGTCTTTTCTCGCCCTGC
                      ____________________________________________________________
consensus                         GGGATGTTTCGTGGCACATCCATGACGAGCGGTCTTTTCTCGCCCTGC
 
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rJMSF002D04+                          CCCCGGTCCTTCAACATCTGACAGCCGAGGATTTAAGCAAGATG
rJMSF028K17+                          CCCCGGTCCTTCAACATCTGACAGCCGAGGATTTAAGCAAGATG
rJMSF015M03+          AGGGTCCACTTGCTGCCCCCGGTCCTTCAACATCTGACAGCCGAGGATTTAAGCAAGATG
rJMSF001B24+                                                      GGATTTAAGCAAGATG
                      ____________________________________________________________
consensus             AGGGTCCACTTGCTGCCCCCGGTCCTTCAACATCTGACAGCCGAGGATTTAAGCAAGATG
 
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rJMSF002D04+          TACTTCAGTGACTTCAAGATATTGAATATCAATGGGGTCTCGTGCTTCCTCACAAGAACA
rJMSF028K17+          TACTTCAGTGACTTCAAGATATTGAATATCAATGGGGTCTCGTGCTTCCTCACAAGAACA
rJMSF015M03+          TACTTCAGTGACTTCAAGATATTGAATATCAATGGGGTCTCGTGCTTCCTCACAAGAACA
rJMSF001B24+          TACTTCAGTGACTTCAAGATATTGAATATCAATGGGGTCTCGTGCTTCCTCNCAAGAACA
                      ____________________________________________________________
consensus             TACTTCAGTGACTTCAAGATATTGAATATCAATGGGGTCTCGTGCTTCCTCACAAGAACA
 
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rJMSF002D04+          GGGTATACGGGTGAAGATGGATTTGAAATCTCGGTGCCTTCAGAACACGCAGTTGACCTC
rJMSF028K17+          GGGTATACGGGTGAAGATGGATTTGAAATCTCGGTGCCTTCAGAACACGCAGTTGACCTC
rJMSF015M03+          GGGTATACGGGTGAAGATGGATTTGAAATCTCGGTGCCTTCAGAACACGCAGTTGACCTC
rJMSF001B24+          GGGTATACGGGTGAAGATGGATTTGAAATCTCGGTGCCTTCAGAACACGCAGTTGACCTC
JMFN012B04-                                                     GAACACGCAGTTGACCTC
                      ____________________________________________________________
consensus             GGGTATACGGGTGAAGATGGATTTGAAATCTCGGTGCCTTCAGAACACGCAGTTGACCTC
 
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rJMSF002D04+          GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
rJMSF028K17+          GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
rJMSF015M03+          GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
rJMSF001B24+          GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
JMFN012B04-           GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
                      ____________________________________________________________
consensus             GCAAAAGCTATTCTTGAAAAATCAGAAGGGAAGGTGCGGTTGACAGGGCTGGGAGCACGA
 
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rJMSF002D04+          GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
rJMSF028K17+          GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
rJMSF015M03+          GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
rJMSF001B24+          GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
JMFN012B04-           GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
                      ____________________________________________________________
consensus             GACAGTCTTCGCCTCGAGGCGGGCTTGTGCTTATACGGCAATGACATGGAGCAGCACACG
 
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rJMSF002D04+          ACGCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
rJMSF028K17+          ACGCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
rJMSF015M03+          ACGCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
rJMSF001B24+          ACNCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
JMFN012B04-           ACGCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
                      ____________________________________________________________
consensus             ACGCCAGTGGAAGCGGGGCTCACATGGGCGATAGGGAAGAGAAGAAGGGCGGAAGGAGGG
 
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rJMSF002D04+          TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
rJMSF028K17+          TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
rJMSF015M03+          TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
rJMSF001B24+          TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
JMFN012B04-           TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
                      ____________________________________________________________
consensus             TTCCTTGGGGCCGAGGTGATCCTGAAACAGCTCGAAGAAGGCCCGAAGATCAGGAGAGTA
 
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rJMSF002D04+          GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
rJMSF028K17+          GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
rJMSF015M03+          GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
rJMSF001B24+          GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
JMFN012B04-           GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
                      ____________________________________________________________
consensus             GGCTTCATATCCTCGGGGCCACCAGCAAGGAGTCACAGCGAGATCCAAGACGGGAATGGG
 
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rJMSF002D04+          CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
rJMSF028K17+          CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
rJMSF015M03+          CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
rJMSF001B24+          CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
JMFN012B04-           CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
                      ____________________________________________________________
consensus             CAAAACATCGGGGAAATCACGAGCGGAGGGTTCAGCCCTTGCCTGAAGAAGAACATAGCG
 
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rJMSF002D04+          ATGGGGTACGTAAAATCCGGGCTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
rJMSF028K17+          ATGGGGTACGTGAAATCCGGGCTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
rJMSF015M03+          ATGGGGTACGTGAAATCCGGGCTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
rJMSF001B24+          ATGGGGTACGTGAAATCCGGGNTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
JMFN012B04-           ATGGGGTACGTGAAATCCGGGCTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
                      ____________________________________________________________
consensus             ATGGGGTACGTGAAATCCGGGCTGCACAAAGCGGGCACAAACGTGAAGATCGTGATCCGA
 
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rJMSF002D04+          GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTACTATAAG
rJMSF028K17+          GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTACTATAAG
rJMSF015M03+          GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTACTATAAG
rJMSF001B24+          GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTNCTATAAG
JMFN012B04-           GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTACTATAAG
                      ____________________________________________________________
consensus             GGGAAGTCCTATGAGGGAGTTGTTACAAAAATGCCTTTTGTCCCAACAAAGTACTATAAG
 
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rJMSF002D04+          CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTTTCATGTTTTCTCTCCTAA-
rJMSF028K17+          CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTT                   
rJMSF015M03+          CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTTTCATGTTTTCTCTCCTAA-
rJMSF001B24+          CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTTTCATGTTTTCTCTCCTAAT
JMFN012B04-           CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTTTCATGTTTTCTCTCCTAA-
                      ____________________________________________________________
consensus             CCATCTTAATTTTTCTCTCTTCTCTGTCATTCATACACTTTTCATGTTTTCTCTCCTAA-
 
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rJMSF002D04+          CTGTAAAACTGCAGAAATGC                                        
rJMSF015M03+          CTGTAAAACTGCAGAAATGC                                        
rJMSF001B24+          CTGTAAAACTGCAGAAATGCTTCTTTTCTGGAAATGAACCCACCTGCAGAC         
JMFN012B04-           CTGTAAAACTGCAGAAATGCTTCTTTTCTGGANATGAACCCACCTGCAGACTTGCTTAAA
                      ____________________________________________________________
consensus             CTGTAAAACTGCAGAAATGCTTCTTTTCTGGAAATGAACCCACCTGCAGACTTGCTTAAA