Contig 000320:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028H11+             TGCCTCCTCTTCCGTCTCCANTCCTGTTGTTTTCTACACCTAACCCCGAGAAATATT
                      ____________________________________________________________
consensus                TGCCTCCTCTTCCGTCTCCANTCCTGTTGTTTTCTACACCTAACCCCGAGAAATATT
 
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rJMSF028H11+          CTCACCCCTCTCTCCTTATAATTGCAATGTCTTTTCCATCCGTTCACTTTTTTCACCATT
                      ____________________________________________________________
consensus             CTCACCCCTCTCTCCTTATAATTGCAATGTCTTTTCCATCCGTTCACTTTTTTCACCATT
 
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rJMSF028H11+          TGTCTTCCAAAATCTTAGTTGGAACACTTATCCTACCCGAGATACCCTTATCTGGCAACT
                      ____________________________________________________________
consensus             TGTCTTCCAAAATCTTAGTTGGAACACTTATCCTACCCGAGATACCCTTATCTGGCAACT
 
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rJMSF028H11+          CCGTTGTACCATCTCTTAAAGACAAATCCTGCAATATATACGCCCTAAACCATACTGATA
                      ____________________________________________________________
consensus             CCGTTGTACCATCTCTTAAAGACAAATCCTGCAATATATACGCCCTAAACCATACTGATA
 
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rJMSF028H11+          AATCGATCTTGGTAGTCTCAGTCCAGTATCCAATCACTTCAGAGAGATCTCATGCAGTGG
                      ____________________________________________________________
consensus             AATCGATCTTGGTAGTCTCAGTCCAGTATCCAATCACTTCAGAGAGATCTCATGCAGTGG
 
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rJMSF028H11+          CAAAGCTGCTTGTTGGACAGCAGATCATCCCAGAACAGGTTTTAATTCTGGATACAATTC
                      ____________________________________________________________
consensus             CAAAGCTGCTTGTTGGACAGCAGATCATCCCAGAACAGGTTTTAATTCTGGATACAATTC
 
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rJMSF028H11+          AGAGTAGTAACTTTAGGGGTAAGCTTCCACCCGATGAAACACTTGCGTTCAAGCTGGAGA
JMFN017P14+                     CTTTAGGGGTAAGCTTCCACCCGATGAAACACTTGCGTTCAAGCTGGAGA
JMFN012A03+                     CTTTAGGGGTAAGCTTCCACCCGATGAAACACTTGCGTTCAAGCTGGAGA
                      ____________________________________________________________
consensus             AGAGTAGTAACTTTAGGGGTAAGCTTCCACCCGATGAAACACTTGCGTTCAAGCTGGAGA
 
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rJMSF028H11+          CATCATTAGAGAGAGAAGGTAAGGCCGATAGCCATGATGATTCTCGGTTGGTTAAATGTT
JMFN017P14+           CATCATTAGAGAGAGAAGGTAAGGCCGATAGCCATGATGATTCTCGGTTGGTTAAATGTT
JMFN012A03+           CATCATTAGAGAGAGAAGGTAAGGCCGATAGCCATGATGATTCTCGGTTGGTTAAATGTT
                      ____________________________________________________________
consensus             CATCATTAGAGAGAGAAGGTAAGGCCGATAGCCATGATGATTCTCGGTTGGTTAAATGTT
 
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rJMSF028H11+          TGGACTATTTCCCATCCGGGAGTGTAGTGGATGGCTTGGCTGCCGCACTATTGAGCAGAT
JMFN017P14+           TGGACTATTTCCCATCCGGGAGTGTAGTGGATGGCTTGGCTGCCGCACTATTGAGCAGAT
JMFN012A03+           TGGACTATTTCCCATCCGGGAGTGTAGTGGATGGCTTGGCTGCCGCACTATTGAGCAGAT
                      ____________________________________________________________
consensus             TGGACTATTTCCCATCCGGGAGTGTAGTGGATGGCTTGGCTGCCGCACTATTGAGCAGAT
 
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rJMSF028H11+          GCGAGATGAGTAAAATAAGAGGGGCAGTGTGTGTTTCATGGCCGGAACTCGGTTCTCCTG
JMFN017P14+           GCGAGATGAGTAAAATAAGAGGGGCAGTGTGTGTTTCATGGCCGGAACTCGGTTCTCCTG
JMFN012A03+           GCGAGATGAGTAAAATAAGAGGGGCAGTGTGTGTTTCATGGCCGGAACTCGGTTCTCCTG
                      ____________________________________________________________
consensus             GCGAGATGAGTAAAATAAGAGGGGCAGTGTGTGTTTCATGGCCGGAACTCGGTTCTCCTG
 
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rJMSF028H11+          TGACATCACTCGTGAAATCTCTGCTGCTCAAGGATGTCTTACCGGGACTGGATCATACTA
JMFN017P14+           TGACATCACTCGTGAAATCTCTGCTGCTCAAGGATGTCTTACCGGGACTGGATCATACTA
JMFN012A03+           TGACATCACTCGTGAAATCTCTGCTGCTCAAGGATGTCTTACCGGGACTGGATCATACTA
                      ____________________________________________________________
consensus             TGACATCACTCGTGAAATCTCTGCTGCTCAAGGATGTCTTACCGGGACTGGATCATACTA
 
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rJMSF028H11+          GCGCTGACAATGGGAAGAGCGACTTTGCTTGGACTGGGCGGAGGAAAGATCATCTTCTTG
JMFN017P14+           GCGCTGACAATGGGAAGAGCGACTTTGCTTGGACTGGGCGGAGGAAAGATCATCTTCTTG
JMFN012A03+           GCGCTGACAATGGGAAGAGCGACTTTGCTTGGACTGGGCGGAGGAAAGATCATCTTCTTG
                      ____________________________________________________________
consensus             GCGCTGACAATGGGAAGAGCGACTTTGCTTGGACTGGGCGGAGGAAAGATCATCTTCTTG
 
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rJMSF028H11+          ACTCTGATCTGTACACCTGATGTTTAGATTTTAGATGATGGCAAGATAGAAAGAA     
JMFN017P14+           ACTCTGATCTGTACACCTGATGTTTAGATTTTAGATGATGGCAAGATAGAAAGAACTGTG
JMFN012A03+           ACTCTGATCTGTACACCTGATGTTTAGATTTTAGATGATGGCAAGATAGAAAGAACTGTG
                      ____________________________________________________________
consensus             ACTCTGATCTGTACACCTGATGTTTAGATTTTAGATGATGGCAAGATAGAAAGAACTGTG
 
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JMFN017P14+           TTTTTTTCAGTTTTATATATTTTCCCTTTGTCTCGGACAATTCCAGTTTCCTTTTCTTGT
JMFN012A03+           TTTTTTTCAGTTTTATATATTTTCCCTTTGTCTCGGACAATTCCAGTTTCCTTTTCTTGT
                      ____________________________________________________________
consensus             TTTTTTTCAGTTTTATATATTTTCCCTTTGTCTCGGACAATTCCAGTTTCCTTTTCTTGT
 
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JMFN017P14+           CAACTTAAATCCATCTTGAGTTCCT                                   
JMFN012A03+           CAACTTAAATCCATCTTGAGTTCCTXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             CAACTTAAATCCATCTTGAGTTCCTNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC