Contig 000319:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011O23Sequence516000319 (2)
JMFN042E19Sequence608000319 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN042E19+ GTAAGAATTTATGCCTAATAACAACGTAGTATG
                      ____________________________________________________________
consensus GTAAGAATTTATGCCTAATAACAACGTAGTATG
 
. : . : . : . : . : . :
JMFN042E19+ GAACTTTTTTTTATTTTATTTTTGGTTGGCATTNTAGTTCTNTAAGATTTCACGGGATCT
                      ____________________________________________________________
consensus GAACTTTTTTTTATTTTATTTTTGGTTGGCATTNTAGTTCTNTAAGATTTCACGGGATCT
 
. : . : . : . : . : . :
JMFN042E19+ AGAAGAAGAATCCGGCAACGGCAGCAGCTCCGAGAGCAGCAGAGATCTTTAAAGCTGCGG
JMFN011O23+ AGCTCCGAGAGCAGCGGAGATCTTTAAAGCTGCGG
                      ____________________________________________________________
consensus AGAAGAAGAATCCGGCAACGGCAGCAGCTCCGAGAGCAGCGGAGATCTTTAAAGCTGCGG
 
. : . : . : . : . : . :
JMFN042E19+ CGCCGCTGTCATAGTCATCTACGGGTGCCTCAGCAGGAGAATCGGAAACCTCATCAGCTG
JMFN011O23+ CGCCGCTGTCATAGTCATCTACGGGCGCCTCAGCAGGAGAATCGGAAACCTCATTAGCTG
                      ____________________________________________________________
consensus CGCCGCTGTCATAGTCATCTACGGGTGCCTCAGCAGGAGAATCGGAAACCTCATTAGCTG
 
. : . : . : . : . : . :
JMFN042E19+ CTGGGCTGCCGGCGCTGGCTGGGGATGGAGGTGATGAGGGCTCCGCTTCGTGGGATCCGG
JMFN011O23+ CTGGGCTGCCGGCGCTGGCTGGGGATGGAGGTGATGAGGGCTCCGCTTTGTGGGATCCGG
                      ____________________________________________________________
consensus CTGGGCTGCCGGCGCTGGCTGGGGATGGAGGTGATGAGGGCTCCGCTTTGTGGGATCCGG
 
. : . : . : . : . : . :
JMFN042E19+ CGGGGGAGCCTGCCGAGGATCCAGTCTTAGGTGAGGCGGCAGCGGGGGATTCCGACGAAG
JMFN011O23+ CGGGGGAGCCTGCCGAGGATCCAGTCTCAGGTGAGGCGGCAGCGGGGGAATCCGACGAAG
                      ____________________________________________________________
consensus CGGGGGAGCCTGCCGAGGATCCAGTCTTAGGTGAGGCGGCAGCGGGGGATTCCGACGAAG
 
. : . : . : . : . : . :
JMFN042E19+ ATCCGGCCAATGGGCTGCCCGCCAACGGAGAGGCTGCATCGGGAGCACCGCTAGCTTTCT
JMFN011O23+ ATCCGGCCAATGGGCTGCCCGCCGACGAAGAAGCTGCATCGGAAACACCGCTAGCTTTCT
                      ____________________________________________________________
consensus ATCCGGCCAATGGGCTGCCCGCCGACGGAGAGGCTGCATCGGGAGCACCGCTAGCTTTCT
 
. : . : . : . : . : . :
JMFN042E19+ TTGGTGCGCCTGCC------------GTAGCACCGGTAGCTTTCTTCGGTGCGCCAGCTG
JMFN011O23+ TTGGTGCGCCTGCCGGTGATGCTGCAGGAGCACCGGTAGCTTTCTTCGGTGCGCCAGCTG
                      ____________________________________________________________
consensus TTGGTGCGCCTGCCGGTGATGCTGCAGTAGCACCGGTAGCTTTCTTCGGTGCGCCAGCTG
 
. : . : . : . : . : . :
JMFN042E19+ GGGCGGCGGAAGGAGAAGATGACGCGGTGCTGCTCGGGGAGCTGGCGGCCGAGGCCATTC
JMFN011O23+ GGGCGGCGGAAGGAGAAGATGACGCGGTGCTGCTCGGGGAGCTGGCGGCCGAGGCCATTC
                      ____________________________________________________________
consensus GGGCGGCGGAAGGAGAAGATGACGCGGTGCTGCTCGGGGAGCTGGCGGCCGAGGCCATTC
 
. : . : . : . : . : . :
JMFN042E19+ CGGCAACGGCGACGAATAGGAGAGCAAAAACAACAACCTGGTTGGCCATTATTGTTGCTT
JMFN011O23+ CGGCAACGGCGACGAATAGGAGAGCAAAAACAACAACCTGGTTGGCCATTATTGTTGCTT
                      ____________________________________________________________
consensus CGGCAACGGCGACGAATAGGAGAGCAAAAACAACAACCTGGTTGGCCATTATTGTTGCTT
 
. : . : . : . : . : . :
JMFN042E19+ TCCGATCCTTTGTTATGGCAGTATTTCTCTAAAACAATGGAGAAAG
JMFN011O23+ TCCGATCCTTTGTTATGGCAGTATTTCTCTAAAACAATGGAGAAAGAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus TCCGATCCTTTGTTATGGCAGTATTTCTCTAAAACAATGGAGAAAGAAAAAAAAAAAAAA