Contig 000315:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009D17Sequence538000315 (2)ref|XP_006423136.1|6e-40hypothetical protein CICLE_v10030268mg, partial [Citrus clementina] gb|ESR36376.
JMFN032K11Sequence586000315 (2)ref|XP_006423136.1|9e-40hypothetical protein CICLE_v10030268mg, partial [Citrus clementina] gb|ESR36376.

Alignment

This contig is upended


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JMFN032K11+             ATGCAAAATAAATTTATAACCGATCCAAGTAATGGCCAACCAAAGCAACACAAGTATT
                      ____________________________________________________________
consensus               ATGCAAAATAAATTTATAACCGATCCAAGTAATGGCCAACCAAAGCAACACAAGTATT
 
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JMFN032K11+           TGCAATTACTGAAAATAACAACCAATTACTGTGAAAATTTGGGCAAAATCACCCATTCAA
JMFN009D17+             CAATTACTGAAAATAACAACCAATTACTGTGAAAATTTGGGCAAAATCACCCATTCAA
                      ____________________________________________________________
consensus             TGCAATTACTGAAAATAACAACCAATTACTGTGAAAATTTGGGCAAAATCACCCATTCAA
 
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JMFN032K11+           AACTCATCCAAAAATACATTGAAAATTTCTAGTGTTTCTGCATGTAACTATTGAAGACAA
JMFN009D17+           AACTCATCCAAAAATACATTGAAAATTTCTAGTGTTTCTGCATGTAACTATTGAAGACAA
                      ____________________________________________________________
consensus             AACTCATCCAAAAATACATTGAAAATTTCTAGTGTTTCTGCATGTAACTATTGAAGACAA
 
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JMFN032K11+           ACATATATGGTGTAAAATTCAAAGAAAATAAGCAAAATTTTGTGACCTAAGTGGCATGTC
JMFN009D17+           ACATATATGGTGTAAAATTCAAAGAAAATAAGCAAAATTTTGTGACCTAAGTGGCATGTC
                      ____________________________________________________________
consensus             ACATATATGGTGTAAAATTCAAAGAAAATAAGCAAAATTTTGTGACCTAAGTGGCATGTC
 
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JMFN032K11+           AATTAACGGCGACGGCCTGCTGCTTAGGCGGATCGAGGGATTTCTTGGACTTATCTCCGA
JMFN009D17+           AATTAACGGCGACGGCCTGCTGCTTAGGCGGATCGAGGGATTTCTTGGACTTATCTCCGA
                      ____________________________________________________________
consensus             AATTAACGGCGACGGCCTGCTGCTTAGGCGGATCGAGGGATTTCTTGGACTTATCTCCGA
 
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JMFN032K11+           GAAAATCTTCCATATTGTAGATGACGGTGATGTAAAGAGAACAACTTGGGCAGCGAGCGA
JMFN009D17+           GAAAATCTTCCATATTGTAGATGACGGTGATGTAAAGAGAACAACTTGGGCAGCGAGCGA
                      ____________________________________________________________
consensus             GAAAATCTTCCATATTGTAGATGACGGTGATGTAAAGAGAACAACTTGGGCAGCGAGCGA
 
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JMFN032K11+           TCTCTTCACCTTGCTTCAGCTCTTCCATGGTAATTTGGAACAGGTCTCCGCACGGACAAG
JMFN009D17+           TCTCTTCACCTTGCTTCAGCTCTTCCATGGTAATTTGGAACAGGTCTCCGCACGGACAAG
                      ____________________________________________________________
consensus             TCTCTTCACCTTGCTTCAGCTCTTCCATGGTAATTTGGAACAGGTCTCCGCACGGACAAG
 
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JMFN032K11+           GGTATGTATACGCCTGAAGCTCTTCCTTCCACTCCATATCCTCGATCTCCACGTCGTCGT
JMFN009D17+           GGTATGTATACGCCTGAAGCTCTTCCTTCCACTCCATATCCTCGATCTCCACGTCGTCGT
                      ____________________________________________________________
consensus             GGTATGTATACGCCTGAAGCTCTTCCTTCCACTCCATATCCTCGATCTCCACGTCGTCGT
 
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JMFN032K11+           AAGACATCGCTTCGTGTTGCTTCCCTCTCTATGCTTCTTTTTCTTTGTTGTATACGAACC
JMFN009D17+           AAGACATCGCTTCGTGTTGCTTCCCTCTCTATGCTTCTTTTTCTTTGTTGTATACGAACC
                      ____________________________________________________________
consensus             AAGACATCGCTTCGTGTTGCTTCCCTCTCTATGCTTCTTTTTCTTTGTTGTATACGAACC
 
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JMFN032K11+           TCTGCCTGAACTGTTTCGTATCTAGGTTTTCTCTTAGGAAATTACTCA            
JMFN009D17+           TCTGCCTGAACTGTTTCGTATCTAGGTTTTCTCTTAGGAAATTACTCAAATTAGGGCTTT
                      ____________________________________________________________
consensus             TCTGCCTGAACTGTTTCGTATCTAGGTTTTCTCTTAGGAAATTACTCAAATTAGGGCTTT