Contig 000312:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I21Sequence435000312 (4)ref|XP_011082559.1|7e-30PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum]606009665 (5)ref|XP_009627021.1|2e-33PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo
JMFN007F19Sequence453000312 (4)
JMFS123F02Sequence569000312 (4)emb|CDP03632.1|6e-107unnamed protein product [Coffea canephora]
JMSF011C02Sequence356000312 (4)ref|XP_011082559.1|2e-29PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Sesamum indicum]778009665 (5)ref|XP_009627021.1|2e-111PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosifo

Alignment

This contig is upended


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JMFS123F02+               TAATGTTAGGGGAAGAGTGCACCAAATTTCCAATTACACCAACCGCTTCATAGTGT
                      ____________________________________________________________
consensus                 TAATGTTAGGGGAAGAGTGCACCAAATTTCCAATTACACCAACCGCTTCATAGTGT
 
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JMFS123F02+           ATTGCAGAATCTTCAGAGCGAAGCATAAGAATAAGAGTGGGTAGAGCATTGCATTCTACT
                      ____________________________________________________________
consensus             ATTGCAGAATCTTCAGAGCGAAGCATAAGAATAAGAGTGGGTAGAGCATTGCATTCTACT
 
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JMFS123F02+           ATCTGATGCTTATTCTCATCATTTTTGAAGGCCAGAGTTCTCAAGGCACCCGCAGCTGCT
                      ____________________________________________________________
consensus             ATCTGATGCTTATTCTCATCATTTTTGAAGGCCAGAGTTCTCAAGGCACCCGCAGCTGCT
 
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JMFS123F02+           CTTTGCACCTTTGGATCAACAAATTCAAGCAACTCAACAAGCGGAGGGATCCCACCTTCA
                      ____________________________________________________________
consensus             CTTTGCACCTTTGGATCAACAAATTCAAGCAACTCAACAAGCGGAGGGATCCCACCTTCA
 
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JMFS123F02+           ACCCTAACACAAGATTTAATGTTGCTATTCTCATGAGCAAGATTGGTGATTGCATCAGCT
                      ____________________________________________________________
consensus             ACCCTAACACAAGATTTAATGTTGCTATTCTCATGAGCAAGATTGGTGATTGCATCAGCT
 
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JMFS123F02+           GCTCTCCTGATAACACCATTCACTGCCCGAGAGGTTTGACCATCTCTGTGTCTCTTTAAA
                      ____________________________________________________________
consensus             GCTCTCCTGATAACACCATTCACTGCCCGAGAGGTTTGACCATCTCTGTGTCTCTTTAAA
 
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JMFS123F02+           AGATTCACAAGATGAGGCAGGGCTCCAGCATCAACAATGAGTTGTTGATGCTCTGGCTTT
                      ____________________________________________________________
consensus             AGATTCACAAGATGAGGCAGGGCTCCAGCATCAACAATGAGTTGTTGATGCTCTGGCTTT
 
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JMFS123F02+           ATGGCAAGAAGCCCAAGTGTGAAGGCACTCCCCTTCTCAACCTCATGCTCATACGGTATC
JMSF011C02+                                                       ATGCTCATACGGTATC
JMFF015I21+                                                       ATGCTCATACGGTATC
                      ____________________________________________________________
consensus             ATGGCAAGAAGCCCAAGTGTGAAGGCACTCCCCTTCTCAACCTCATGCTCATACGGTATC
 
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JMFS123F02+           GGACCGGAATCTCTTTCCCCCGCCGGAACCGGCGGCAGAAGATTCCGCACCAGACCCGGG
JMSF011C02+           GGACCGGAATCTCTTTCCCCCGCCGGAACCGGCGGCAGAAGATTCCGCACCAGACCCGGG
JMFF015I21+           GGACCGGAATCTCTTTCCCCCGCCGGAACCGGCGGCAGAAGATTCCGCACCAGACCCGGG
                      ____________________________________________________________
consensus             GGACCGGAATCTCTTTCCCCCGCCGGAACCGGCGGCAGAAGATTCCGCACCAGACCCGGG
 
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JMFS123F02+           ACTGCGCCGCACTCCACAATAACGTTCACAAAT                           
JMSF011C02+           ACTGCGCCGCACTCCACAATAACGTTCACAAATTCCTCGTTCTTCGCCAGCTCAGACAGG
JMFF015I21+           ACTGCGCCGCACTCCACAATAACGTTCACAAATTCCTCGTTCTTCGCCAGCTCAGACAGG
                      ____________________________________________________________
consensus             ACTGCGCCGCACTCCACAATAACGTTCACAAATTCCTCGTTCTTCGCCAGCTCAGACAGG
 
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JMSF011C02+           ACGTGGATAGCTCGCTTGGAGGAAGCTCGATCCTGCTCCGTCGAAGAGAACGACGATTCC
JMFF015I21+           ACGTGGATAGCTCGCTTGGAGGAAGCTCGATCCTGCTCCGTNGAAGAGAACGACGATTCC
                      ____________________________________________________________
consensus             ACGTGGATAGCTCGCTTGGAGGAAGCTCGATCCTGCTCCGTCGAAGAGAACGACGATTCC
 
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JMSF011C02+           AGAATCTCCACTTGAGCACGGACCTCGACGACGAGATCTCGGTGAGCTTCTTCGACGGAG
JMFF015I21+           AGAATCTCCACTTGAGCACGGACCTCGACGACGAGATCTCGGTGAGCTTCTTCGACGGAG
JMFN007F19+                                    CGACAACGAGATCTTGGTGAGCTTCTTCGACGGAG
                      ____________________________________________________________
consensus             AGAATCTCCACTTGAGCACGGACCTCGACGACGAGATCTCGGTGAGCTTCTTCGACGGAG
 
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JMSF011C02+           AGAGACACGATCCTCGACCGATCGTGCTCCAAAACCTCTTCCAGCTTCCTCTTCAAGCTC
JMFF015I21+           AGAGACACGATCCTCGACCGATCGTGCTCCAAAACCTCTTCCAGCTTCCTCTTCAAGCTC
JMFN007F19+           AGAGAAACGATCCTCGACCGATCGTGCTCCAAAACCTCTTCCAGCTTCCTCTTCAAGCTC
                      ____________________________________________________________
consensus             AGAGACACGATCCTCGACCGATCGTGCTCCAAAACCTCTTCCAGCTTCCTCTTCAAGCTC
 
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JMSF011C02+           CTTCTCGAACCGGAGCTCGAAAACCGTTCGCTGC                          
JMFF015I21+           CTTCTCGAACCGGAGCTCGAAAACCGTTCGCTGCGCTTCTGGTTCCGGTTCTCCATGTGA
JMFN007F19+           CTTCTCGAACCGGAGCTCGAAAATCGCTCGCTGCTCTTCTGGTTCCGATTTTCCATGTGA
                      ____________________________________________________________
consensus             CTTCTCGAACCGGAGCTCGAAAACCGTTCGCTGCTCTTCTGGTTCCGGTTTTCCATGTGA
 
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JMFF015I21+           G                                                           
JMFN007F19+           GGAATTTGACACATAACCTTTGATAATCAGTTACCAGATTAAATCAGTGGTGAATTTGCT
                      ____________________________________________________________
consensus             GGAATTTGACACATAACCTTTGATAATCAGTTACCAGATTAAATCAGTGGTGAATTTGCT
 
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JMFN007F19+           GAGGAATTTGTCTACGTACTAGATTAAATCTAGTACCAGATTTAATCTCGTAACGCCCTC
                      ____________________________________________________________
consensus             GAGGAATTTGTCTACGTACTAGATTAAATCTAGTACCAGATTTAATCTCGTAACGCCCTC