Contig 000311:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007B23Sequence604000311 (2)ref|XP_009770139.1|187PREDICTED: uncharacterized protein LOC104220871 [Nicotiana sylvestris]
JMFN008E18Sequence625000311 (2)ref|XP_009774608.1|192PREDICTED: uncharacterized protein LOC104224623 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN008E18+ CGCCTCGTCGACGTGATCGTTTTTG
JMFN007B23+ G
                      ____________________________________________________________
consensus CGCCTCGTCGACGTGATCGTTTTTG
 
. : . : . : . : . : . :
JMFN008E18+ TCAACTTCTCTAATGGGGAACGGCGAGTCGGTGATCCTGAGCTGCCGCACCACCGGGGTC
JMFN007B23+ TCAACTTCTCTAATGGGGAACGGCGAGTCGGTGATCCTGAGCTGCCGCACCACCGGGGTC
                      ____________________________________________________________
consensus TCAACTTCTCTAATGGGGAACGGCGAGTCGGTGATCCTGAGCTGCCGCACCACCGGGGTC
 
. : . : . : . : . : . :
JMFN008E18+ CGGCCGAATCCGGGCAGCGCCGGGGAGGCGGTTTCGCTGTGGAGGATCTCCAGGGCCTTG
JMFN007B23+ CGGCTGAATCCGGGCAGCGCCGGGGAGGCGGTTTCGCTGTGGAGGATCTCCAGGGCCTTG
                      ____________________________________________________________
consensus CGGCTGAATCCGGGCAGCGCCGGGGAGGCGGTTTCGCTGTGGAGGATCTCCAGGGCCTTG
 
. : . : . : . : . : . :
JMFN008E18+ ACGACGGCGTTGGCCGCCAGAATGTCCTCGTAGGTGGGCGGCGCGTGGTGGTGCTTGCTC
JMFN007B23+ ACGACGGCGTTGGCCGCCAGAATGTCCTCGTAGGTGGGCGGCGCGTGGTGGTGCTTGCTC
                      ____________________________________________________________
consensus ACGACGGCGTTGGCCGCCAGAATGTCCTCGTAGGTGGGCGGCGCGTGGTGGTGCTTGCTC
 
. : . : . : . : . : . :
JMFN008E18+ TTCTTGTGGAGGGAGAAAGGGAGCTGGTAGGCGGGGCTGTCGTTGCAGCTGAACTCGTAC
JMFN007B23+ TTCTTGTGGAGGGAGAAAGGGAGCTGGTAGGCGGGGCTGTCGTTGCAGCTGAACTCGTAC
                      ____________________________________________________________
consensus TTCTTGTGGAGGGAGAAAGGGAGCTGGTAGGCGGGGCTGTCGTTGCAGCTGAACTCGTAC
 
. : . : . : . : . : . :
JMFN008E18+ TCGTTGGGGTGGGTGGCGGTGTATGAAGATCGGCGGAGGGCGGCGGCGGTGGAGGAGGAG
JMFN007B23+ TCGTTGGGGTGGGTGGCGGTGTATGAAGATCGGCGGAGGGCGCCGGCGGTGGAGGAGGAG
                      ____________________________________________________________
consensus TCGTTGGGGTGGGTGGCGGTGTATGAAGATCGGCGGAGGGCGGCGGCGGTGGAGGAGGAG
 
. : . : . : . : . : . :
JMFN008E18+ GAGGAGAGGTGGAATAGCATGAGGTTGTGGATGGCGGTTTTTCCGGCGATCTTGCCGCGT
JMFN007B23+ GAGGAGAGGTGGAATAGCATGAGGTTGTGGATGGCGGTTTTTCCGGCGATCTTGCCGCGT
                      ____________________________________________________________
consensus GAGGAGAGGTGGAATAGCATGAGGTTGTGGATGGCGGTTTTTCCGGCGATCTTGCCGCGT
 
. : . : . : . : . : . :
JMFN008E18+ TTCAGTACGAGGTTGATATCGAGCATCAGCTTCGTCTTGGAGATTATGCCCTTTCGTAAC
JMFN007B23+ TTCAGTACGAGGTTGATATCGAGCATCAGCTTCGTCTTGGAGATTATGCCCTTTCGTAAC
                      ____________________________________________________________
consensus TTCAGTACGAGGTTGATATCGAGCATCAGCTTCGTCTTGGAGATTATGCCCTTTCGTAAC
 
. : . : . : . : . : . :
JMFN008E18+ ATTAACAAAGCAGTCCTCACAACGCTCCAAAATTTCTTTGCCACCACCGGAAAATTGCTT
JMFN007B23+ ATTAACAAAGCAGTCCTCACAACGCTCCAAAATTTCTTTGCCACCACCGGAAAATTGCTT
                      ____________________________________________________________
consensus ATTAACAAAGCAGTCCTCACAACGCTCCAAAATTTCTTTGCCACCACCGGAAAATTGCTT
 
. : . : . : . : . : . :
JMFN008E18+ GGCTCCATCCTTCTACTTTCAAATAATTCGATTTCGATCCTTCAATTTTTGTTTTTTGGG
JMFN007B23+ GGCTCCATCCTTCTACTTTCAAATAATTCGATTTCGATCCTTCAATTTTTGTTTTTTGGG
                      ____________________________________________________________
consensus GGCTCCATCCTTCTACTTTCAAATAATTCGATTTCGATCCTTCAATTTTTGTTTTTTGGG
 
. : . : . : . : . : . :
JMFN008E18+ TTTAATTTGAGAGAGATGAAGAGAGAGAGAGAGAGAGAGAGATTTATTTATTTAGTTTTT
JMFN007B23+ TTTAATTTGAGAGAGATGAAGAGAGAGAGAGAGAGAGAGACATTTATTTATTTAGTTTTT
                      ____________________________________________________________
consensus TTTAATTTGAGAGAGATGAAGAGAGAGAGAGAGAGAGAGAGATTTATTTATTTAGTTTTT